RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 FAM43BQ6ZT52 329 aaPredicted RBP29.01■■■□□ 2.23
CPSF6-205ENST00000550075 C4orf32Q8N8J7 132 aa29.01■■■□□ 2.23
CPSF6-205ENST00000550075 LOXHD1Q8IVV2 1947 aa29■■■□□ 2.23
CPSF6-205ENST00000550075 GBF1Q92538 1859 aa29■■■□□ 2.23
CPSF6-205ENST00000550075 GRXCR1A8MXD5 290 aa29■■■□□ 2.23
CPSF6-205ENST00000550075 MAFO75444 373 aaPredicted RBP29■■■□□ 2.23
CPSF6-205ENST00000550075 BMP15O95972 392 aa29■■■□□ 2.23
CPSF6-205ENST00000550075 PAK2Q13177 524 aa29■■■□□ 2.23
CPSF6-205ENST00000550075 TCTN1Q2MV58 587 aa29■■■□□ 2.23
CPSF6-205ENST00000550075 XKR9Q5GH70 373 aa29■■■□□ 2.23
CPSF6-205ENST00000550075 HERC6Q8IVU3 1022 aa29■■■□□ 2.23
CPSF6-205ENST00000550075 SCLT1Q96NL6 688 aa29■■■□□ 2.23
CPSF6-205ENST00000550075 PBX4Q9BYU1 374 aa29■■■□□ 2.23
CPSF6-205ENST00000550075 ANKEF1Q9NU02 776 aa29■■■□□ 2.23
CPSF6-205ENST00000550075 PCDHA11Q9Y5I1 949 aa29■■■□□ 2.23
CPSF6-205ENST00000550075 LAMA2P24043 3122 aaKnown RBP28.99■■■□□ 2.23
CPSF6-205ENST00000550075 GAS2O43903 313 aaKnown RBP28.99■■■□□ 2.23
CPSF6-205ENST00000550075 CRYBB1P53674 252 aaPredicted RBP28.99■■■□□ 2.23
CPSF6-205ENST00000550075 CDC42EP1Q00587 391 aa28.99■■■□□ 2.23
CPSF6-205ENST00000550075 KIZQ2M2Z5 673 aa28.99■■■□□ 2.23
CPSF6-205ENST00000550075 DTHD1Q6ZMT9 781 aa28.99■■■□□ 2.23
CPSF6-205ENST00000550075 FERMT3Q86UX7 667 aa28.99■■■□□ 2.23
CPSF6-205ENST00000550075 TIFAQ96CG3 184 aa28.99■■■□□ 2.23
CPSF6-205ENST00000550075 CEP89Q96ST8 783 aa28.99■■■□□ 2.23
CPSF6-205ENST00000550075 SH2D3AQ9BRG2 576 aa28.99■■■□□ 2.23
CPSF6-205ENST00000550075 POLR3CQ9BUI4 534 aaPredicted RBP28.99■■■□□ 2.23
CPSF6-205ENST00000550075 OSBPL7Q9BZF2 842 aa28.99■■■□□ 2.23
CPSF6-205ENST00000550075 LRWD1Q9UFC0 647 aa28.99■■■□□ 2.23
CPSF6-205ENST00000550075 IGKV6-21A0A0C4DH24 114 aa28.98■■■□□ 2.23
CPSF6-205ENST00000550075 CD52P31358 61 aa28.98■■■□□ 2.23
CPSF6-205ENST00000550075 NPEPPSP55786 919 aa28.98■■■□□ 2.23
CPSF6-205ENST00000550075 ATP2C1P98194 919 aaPredicted RBP28.98■■■□□ 2.23
CPSF6-205ENST00000550075 PDIA5Q14554 519 aa28.98■■■□□ 2.23
CPSF6-205ENST00000550075 DEFB123Q8N688 67 aa28.98■■■□□ 2.23
CPSF6-205ENST00000550075 FTHL17Q9BXU8 183 aa28.98■■■□□ 2.23
CPSF6-205ENST00000550075 PTPRSQ13332 1948 aa28.97■■■□□ 2.23
CPSF6-205ENST00000550075 RPS6KA5O75582 802 aa28.97■■■□□ 2.23
CPSF6-205ENST00000550075 PDIA4P13667 645 aaKnown RBP28.97■■■□□ 2.23
CPSF6-205ENST00000550075 MUTP22033 750 aa28.97■■■□□ 2.23
CPSF6-205ENST00000550075 RPA1P27694 616 aa28.97■■■□□ 2.23
CPSF6-205ENST00000550075 NLRP11P59045 1033 aaKnown RBP28.97■■■□□ 2.23
CPSF6-205ENST00000550075 DEFB103AP81534 67 aa28.97■■■□□ 2.23
CPSF6-205ENST00000550075 PPP1R16BQ96T49 567 aa28.97■■■□□ 2.23
CPSF6-205ENST00000550075 OSMRQ99650 979 aa28.97■■■□□ 2.23
CPSF6-205ENST00000550075 ZBED2Q9BTP6 218 aa28.97■■■□□ 2.23
CPSF6-205ENST00000550075 DHX33Q9H6R0 707 aaKnown RBP28.97■■■□□ 2.23
CPSF6-205ENST00000550075 STX6O43752 255 aa28.96■■■□□ 2.23
CPSF6-205ENST00000550075 XRCC6P12956 609 aaKnown RBP eCLIP28.96■■■□□ 2.239e-12■■■■□ 25
CPSF6-205ENST00000550075 ARL6IP4Q66PJ3 421 aaKnown RBP28.96■■■□□ 2.23
CPSF6-205ENST00000550075 MYOCDQ8IZQ8 938 aa28.96■■■□□ 2.23
CPSF6-205ENST00000550075 IGSF22Q8N9C0 903 aa28.96■■■□□ 2.23
CPSF6-205ENST00000550075 TCP11Q8WWU5 503 aa28.96■■■□□ 2.23
CPSF6-205ENST00000550075 AGO3Q9H9G7 860 aaKnown RBP28.96■■■□□ 2.23
CPSF6-205ENST00000550075 PADI3Q9ULW8 664 aa28.96■■■□□ 2.23
CPSF6-205ENST00000550075 GPR32O75388 356 aa28.95■■■□□ 2.22
CPSF6-205ENST00000550075 SPATA31C1P0DKV0 1188 aa28.95■■■□□ 2.22
CPSF6-205ENST00000550075 CCT6AP40227 531 aaKnown RBP28.95■■■□□ 2.22
CPSF6-205ENST00000550075 PBX2P40425 430 aa28.95■■■□□ 2.22
CPSF6-205ENST00000550075 GPC3P51654 580 aa28.95■■■□□ 2.22
CPSF6-205ENST00000550075 MKRN4PQ13434 485 aaPredicted RBP28.95■■■□□ 2.22
CPSF6-205ENST00000550075 EMC2Q15006 297 aa28.95■■■□□ 2.22
CPSF6-205ENST00000550075 CATSPER3Q86XQ3 398 aa28.95■■■□□ 2.22
CPSF6-205ENST00000550075 NLRP7Q8WX94 980 aa28.95■■■□□ 2.22
CPSF6-205ENST00000550075 NACC1Q96RE7 527 aa28.95■■■□□ 2.22
CPSF6-205ENST00000550075 SUCLA2Q9P2R7 463 aaPredicted RBP28.95■■■□□ 2.22
CPSF6-205ENST00000550075 GPR182O15218 404 aa28.94■■■□□ 2.22
CPSF6-205ENST00000550075 TLL1O43897 1013 aa28.94■■■□□ 2.22
CPSF6-205ENST00000550075 MED24O75448 989 aa28.94■■■□□ 2.22
CPSF6-205ENST00000550075 RABGGTBP53611 331 aa28.94■■■□□ 2.22
CPSF6-205ENST00000550075 KRT79Q5XKE5 535 aa28.94■■■□□ 2.22
CPSF6-205ENST00000550075 SNX29Q8TEQ0 813 aa28.94■■■□□ 2.22
CPSF6-205ENST00000550075 ZSCAN16Q9H4T2 348 aaPredicted RBP28.94■■■□□ 2.22
CPSF6-205ENST00000550075 SLC28A3Q9HAS3 691 aa28.94■■■□□ 2.22
CPSF6-205ENST00000550075 MTMR6Q9Y217 621 aa28.94■■■□□ 2.22
CPSF6-205ENST00000550075 DGAT1O75907 488 aa28.93■■■□□ 2.22
CPSF6-205ENST00000550075 GJB5O95377 273 aa28.93■■■□□ 2.22
CPSF6-205ENST00000550075 NFX1Q12986 1120 aaKnown RBP28.93■■■□□ 2.22
CPSF6-205ENST00000550075 RESTQ13127 1097 aa28.93■■■□□ 2.22
CPSF6-205ENST00000550075 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.93■■■□□ 2.22
CPSF6-205ENST00000550075 Q7L0L9 218 aa28.93■■■□□ 2.22
CPSF6-205ENST00000550075 ZNF410Q86VK4 478 aa28.93■■■□□ 2.22
CPSF6-205ENST00000550075 ZNF579Q8NAF0 562 aaKnown RBP28.93■■■□□ 2.22
CPSF6-205ENST00000550075 PSPC1Q8WXF1 523 aaKnown RBP28.93■■■□□ 2.22
CPSF6-205ENST00000550075 MTRQ99707 1265 aa28.93■■■□□ 2.22
CPSF6-205ENST00000550075 NKX2-4Q9H2Z4 354 aa28.93■■■□□ 2.22
CPSF6-205ENST00000550075 ADAMTS10Q9H324 1103 aa28.93■■■□□ 2.22
CPSF6-205ENST00000550075 CDHR5Q9HBB8 845 aa28.93■■■□□ 2.22
CPSF6-205ENST00000550075 ATP6V0A4Q9HBG4 840 aa28.93■■■□□ 2.22
CPSF6-205ENST00000550075 NOC2LQ9Y3T9 749 aaKnown RBP28.93■■■□□ 2.22
CPSF6-205ENST00000550075 RARRES1P49788 294 aa28.92■■■□□ 2.22
CPSF6-205ENST00000550075 DRP2Q13474 957 aa28.92■■■□□ 2.22
CPSF6-205ENST00000550075 POTEGQ6S5H5 508 aa28.92■■■□□ 2.22
CPSF6-205ENST00000550075 RHPN2Q8IUC4 686 aa28.92■■■□□ 2.22
CPSF6-205ENST00000550075 PIGOQ8TEQ8 1089 aa28.92■■■□□ 2.22
CPSF6-205ENST00000550075 TMEM40Q8WWA1 233 aa28.92■■■□□ 2.22
CPSF6-205ENST00000550075 GCOM2Q9BZD3 368 aaPredicted RBP28.92■■■□□ 2.22
CPSF6-205ENST00000550075 ERVK-5Q9HDB9 667 aa28.92■■■□□ 2.22
CPSF6-205ENST00000550075 DBR1Q9UK59 544 aaKnown RBP28.92■■■□□ 2.22
CPSF6-205ENST00000550075 YBX2Q9Y2T7 364 aaKnown RBP28.92■■■□□ 2.22
CPSF6-205ENST00000550075 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms