RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 MAFO75444 373 aaPredicted RBP23.59■■□□□ 1.37
VPS29-206ENST00000549578 RFC5P40937 340 aa23.59■■□□□ 1.37
VPS29-206ENST00000549578 EMC2Q15006 297 aa23.59■■□□□ 1.37
VPS29-206ENST00000549578 SERINC5Q86VE9 423 aa23.59■■□□□ 1.37
VPS29-206ENST00000549578 SLC7A3Q8WY07 619 aa23.59■■□□□ 1.37
VPS29-206ENST00000549578 WNT8BQ93098 351 aa23.59■■□□□ 1.37
VPS29-206ENST00000549578 TOX2Q96NM4 488 aa23.59■■□□□ 1.37
VPS29-206ENST00000549578 RUSC1Q9BVN2 902 aa23.59■■□□□ 1.37
VPS29-206ENST00000549578 SUGCTQ9HAC7 445 aa23.59■■□□□ 1.37
VPS29-206ENST00000549578 LMBRD1Q9NUN5 540 aa23.59■■□□□ 1.37
VPS29-206ENST00000549578 PCDHA2Q9Y5H9 948 aa23.59■■□□□ 1.37
VPS29-206ENST00000549578 EVPLQ92817 2033 aa23.58■■□□□ 1.37
VPS29-206ENST00000549578 GOLGA6L22H0YM25 854 aa23.58■■□□□ 1.36
VPS29-206ENST00000549578 TLR3O15455 904 aaKnown RBP23.58■■□□□ 1.36
VPS29-206ENST00000549578 DGAT1O75907 488 aa23.58■■□□□ 1.36
VPS29-206ENST00000549578 LIG1P18858 919 aa23.58■■□□□ 1.36
VPS29-206ENST00000549578 CLCN3P51790 818 aa23.58■■□□□ 1.36
VPS29-206ENST00000549578 FAAP100Q0VG06 881 aa23.58■■□□□ 1.36
VPS29-206ENST00000549578 DRP2Q13474 957 aa23.58■■□□□ 1.36
VPS29-206ENST00000549578 EFCAB12Q6NXP0 572 aa23.58■■□□□ 1.36
VPS29-206ENST00000549578 FAM49AQ9H0Q0 323 aaPredicted RBP23.58■■□□□ 1.36
VPS29-206ENST00000549578 XPNPEP1Q9NQW7 623 aa23.58■■□□□ 1.36
VPS29-206ENST00000549578 IGKV6-21A0A0C4DH24 114 aa23.57■■□□□ 1.36
VPS29-206ENST00000549578 RINT1Q6NUQ1 792 aa23.57■■□□□ 1.36
VPS29-206ENST00000549578 MAEAQ7L5Y9 396 aa23.57■■□□□ 1.36
VPS29-206ENST00000549578 RETREG2Q8NC44 543 aa23.57■■□□□ 1.36
VPS29-206ENST00000549578 DHX38Q92620 1227 aaKnown RBP23.57■■□□□ 1.36
VPS29-206ENST00000549578 PYM1Q9BRP8 204 aaKnown RBP23.57■■□□□ 1.36
VPS29-206ENST00000549578 ATP6V0A4Q9HBG4 840 aa23.57■■□□□ 1.36
VPS29-206ENST00000549578 PDLIM7Q9NR12 457 aa23.57■■□□□ 1.36
VPS29-206ENST00000549578 SERTAD1Q9UHV2 236 aa23.57■■□□□ 1.36
VPS29-206ENST00000549578 ACTN4O43707 911 aaKnown RBP23.56■■□□□ 1.36
VPS29-206ENST00000549578 PTK7Q13308 1070 aa23.56■■□□□ 1.36
VPS29-206ENST00000549578 MKRN4PQ13434 485 aaPredicted RBP23.56■■□□□ 1.36
VPS29-206ENST00000549578 LONRF3Q496Y0 759 aa23.56■■□□□ 1.36
VPS29-206ENST00000549578 GPBP1Q86WP2 473 aa23.56■■□□□ 1.36
VPS29-206ENST00000549578 FMR1NBQ8N0W7 255 aaPredicted RBP23.56■■□□□ 1.36
VPS29-206ENST00000549578 LINC01465Q8N7H1 131 aa23.56■■□□□ 1.36
VPS29-206ENST00000549578 ENGASEQ8NFI3 743 aa23.56■■□□□ 1.36
VPS29-206ENST00000549578 DNAJB3Q8WWF6 145 aa23.56■■□□□ 1.36
VPS29-206ENST00000549578 STAMQ92783 540 aa23.56■■□□□ 1.36
VPS29-206ENST00000549578 TMEM143Q96AN5 459 aa23.56■■□□□ 1.36
VPS29-206ENST00000549578 MTRQ99707 1265 aa23.56■■□□□ 1.36
VPS29-206ENST00000549578 CUEDC2Q9H467 287 aa23.56■■□□□ 1.36
VPS29-206ENST00000549578 SMIM35A0A1B0GVV1 85 aa23.55■■□□□ 1.36
VPS29-206ENST00000549578 CAPN15O75808 1086 aa23.55■■□□□ 1.36
VPS29-206ENST00000549578 ZNF202O95125 648 aa23.55■■□□□ 1.36
VPS29-206ENST00000549578 CYP11B2P19099 503 aa23.55■■□□□ 1.36
VPS29-206ENST00000549578 FAM160A1Q05DH4 1040 aa23.55■■□□□ 1.36
VPS29-206ENST00000549578 RAD51AP2Q09MP3 1159 aa23.55■■□□□ 1.36
VPS29-206ENST00000549578 SNW1Q13573 536 aaKnown RBP23.55■■□□□ 1.36
VPS29-206ENST00000549578 ARSHQ5FYA8 562 aa23.55■■□□□ 1.36
VPS29-206ENST00000549578 TAF2Q6P1X5 1199 aa23.55■■□□□ 1.36
VPS29-206ENST00000549578 C1orf186Q6ZWK4 172 aa23.55■■□□□ 1.36
VPS29-206ENST00000549578 SV2BQ7L1I2 683 aa23.55■■□□□ 1.36
VPS29-206ENST00000549578 JPH2Q9BR39 696 aaPredicted RBP23.55■■□□□ 1.36
VPS29-206ENST00000549578 HTATIP2Q9BUP3 242 aa23.55■■□□□ 1.36
VPS29-206ENST00000549578 POLD4Q9HCU8 107 aa23.55■■□□□ 1.36
VPS29-206ENST00000549578 GPRC5CQ9NQ84 441 aa23.55■■□□□ 1.36
VPS29-206ENST00000549578 NPHP3-ACAD11A0A0J9YXS1 232 aa23.54■■□□□ 1.36
VPS29-206ENST00000549578 NR1I2O75469 434 aa23.54■■□□□ 1.36
VPS29-206ENST00000549578 CLTBP09497 229 aa23.54■■□□□ 1.36
VPS29-206ENST00000549578 SLFN14P0C7P3 912 aa23.54■■□□□ 1.36
VPS29-206ENST00000549578 EXOC8Q8IYI6 725 aa23.54■■□□□ 1.36
VPS29-206ENST00000549578 CEP57L1Q8IYX8 460 aa23.54■■□□□ 1.36
VPS29-206ENST00000549578 KIAA0319LQ8IZA0 1049 aa23.54■■□□□ 1.36
VPS29-206ENST00000549578 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.54■■□□□ 1.36
VPS29-206ENST00000549578 TMOD1P28289 359 aa23.54■■□□□ 1.36
VPS29-206ENST00000549578 MCM4P33991 863 aa23.54■■□□□ 1.36
VPS29-206ENST00000549578 TRIM71Q2Q1W2 868 aaKnown RBP23.54■■□□□ 1.36
VPS29-206ENST00000549578 GRAMD1CQ8IYS0 662 aa23.54■■□□□ 1.36
VPS29-206ENST00000549578 MCPH1Q8NEM0 835 aa23.54■■□□□ 1.36
VPS29-206ENST00000549578 KBTBD4Q9NVX7 518 aa23.54■■□□□ 1.36
VPS29-206ENST00000549578 MYMKA6NI61 221 aa23.53■■□□□ 1.36
VPS29-206ENST00000549578 VTNP04004 478 aa23.53■■□□□ 1.36
VPS29-206ENST00000549578 THPOP40225 353 aa23.53■■□□□ 1.36
VPS29-206ENST00000549578 CACNB1Q02641 598 aaPredicted RBP23.53■■□□□ 1.36
VPS29-206ENST00000549578 TMEM62Q0P6H9 643 aa23.53■■□□□ 1.36
VPS29-206ENST00000549578 FAM102BQ5T8I3 360 aa23.53■■□□□ 1.36
VPS29-206ENST00000549578 SH3RF1Q7Z6J0 888 aa23.53■■□□□ 1.36
VPS29-206ENST00000549578 TNMDQ9H2S6 317 aa23.53■■□□□ 1.36
VPS29-206ENST00000549578 PRDM5Q9NQX1 630 aaPredicted RBP23.53■■□□□ 1.36
VPS29-206ENST00000549578 TMEM39AQ9NV64 488 aa23.53■■□□□ 1.36
VPS29-206ENST00000549578 SUCLA2Q9P2R7 463 aaPredicted RBP23.53■■□□□ 1.36
VPS29-206ENST00000549578 USP25Q9UHP3 1055 aa23.53■■□□□ 1.36
VPS29-206ENST00000549578 TBX21Q9UL17 535 aa23.53■■□□□ 1.36
VPS29-206ENST00000549578 AKT3Q9Y243 479 aa23.53■■□□□ 1.36
VPS29-206ENST00000549578 GAS2O43903 313 aaKnown RBP23.52■■□□□ 1.36
VPS29-206ENST00000549578 GUCY2CP25092 1073 aa23.52■■□□□ 1.36
VPS29-206ENST00000549578 AFMP43652 599 aa23.52■■□□□ 1.36
VPS29-206ENST00000549578 DNM2P50570 870 aa23.52■■□□□ 1.36
VPS29-206ENST00000549578 KRBA2Q6ZNG9 492 aa23.52■■□□□ 1.36
VPS29-206ENST00000549578 C7orf61Q8IZ16 206 aa23.52■■□□□ 1.36
VPS29-206ENST00000549578 CNNM3Q8NE01 707 aa23.52■■□□□ 1.36
VPS29-206ENST00000549578 MAP7D2Q96T17 732 aa23.52■■□□□ 1.36
VPS29-206ENST00000549578 PPP1R16BQ96T49 567 aa23.52■■□□□ 1.36
VPS29-206ENST00000549578 POLR3FQ9H1D9 316 aaPredicted RBP23.52■■□□□ 1.36
VPS29-206ENST00000549578 MAGEF1Q9HAY2 307 aa23.52■■□□□ 1.36
VPS29-206ENST00000549578 KCND2Q9NZV8 630 aa23.52■■□□□ 1.36
VPS29-206ENST00000549578 HIP1RO75146 1068 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms