RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 KRBA2Q6ZNG9 492 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 STXBP4Q6ZWJ1 553 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 USP49Q70CQ1 688 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 ANO5Q75V66 913 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 GPBP1Q86WP2 473 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 CCDC65Q8IXS2 484 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 NME8Q8N427 588 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 ENGASEQ8NFI3 743 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 PIGOQ8TEQ8 1089 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 KAT2BQ92831 832 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 CHAMP1Q96JM3 812 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 MTRQ99707 1265 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 ANP32EQ9BTT0 268 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 C11orf49Q9H6J7 331 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 DHX33Q9H6R0 707 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 KBTBD4Q9NVX7 518 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 RMND1Q9NWS8 449 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 DACT1Q9NYF0 836 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 GTF2IRD1Q9UHL9 959 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 TUBE1Q9UJT0 475 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 NOD1Q9Y239 953 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 COL4A3BPQ9Y5P4 624 aa10.85□□□□□ -0.67
SMARCD1-206ENST00000549274 EVPLQ92817 2033 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 SMIM35A0A1B0GVV1 85 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 M0QZ92 97 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 ACTN4O43707 911 aaKnown RBP10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 GTPBP6O43824 516 aaPredicted RBP10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 GADD45BO75293 160 aaPredicted RBP10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 MAFO75444 373 aaPredicted RBP10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 NR1I2O75469 434 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 LETM1O95202 739 aaPredicted RBP10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 MYCP01106 439 aaPredicted RBP10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 CYP11B2P19099 503 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 ATP4AP20648 1035 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 HOXC8P31273 242 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 PPP1R2P41236 205 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 RTP1P59025 263 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 TFDP1Q14186 410 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 EMC2Q15006 297 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 KLHL40Q2TBA0 621 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 NBPF20Q3BBV1 942 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 ODR4Q5SWX8 454 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 PADI6Q6TGC4 694 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 RPAINQ86UA6 219 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 SLC43A3Q8NBI5 491 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 PSPC1Q8WXF1 523 aaKnown RBP10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 IFT74Q96LB3 600 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 C7orf25Q9BPX7 421 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 RNPEPQ9H4A4 650 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 GOLPH3LQ9H4A5 285 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 BLOC1S4Q9NUP1 217 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 LARSQ9P2J5 1176 aaKnown RBP10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 WRAP73Q9P2S5 460 aaPredicted RBP10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 SERTAD1Q9UHV2 236 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 PCDHA2Q9Y5H9 948 aa10.84□□□□□ -0.67
SMARCD1-206ENST00000549274 PVALEFA0A1B0GWK0 134 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 MBLAC1A4D2B0 266 aaPredicted RBP10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 DCDC2CA8MYV0 355 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 E9PMD0 336 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 PITPNM1O00562 1244 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 USO1O60763 962 aaKnown RBP10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 FAM13AO94988 1023 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 STBD1O95210 358 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 KIF20AO95235 890 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 PARNO95453 639 aaKnown RBP10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 LIG1P18858 919 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 KLRC1P26715 233 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 SMTNP53814 917 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 CHMP4BP1P59074 171 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 POU5F1BQ06416 359 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 PTK7Q13308 1070 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 SNW1Q13573 536 aaKnown RBP10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 ALCAMQ13740 583 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 MCM6Q14566 821 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 POSTNQ15063 836 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 ECM1Q16610 540 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 LONRF3Q496Y0 759 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 NAALADL2Q58DX5 795 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 CCDC183Q5T5S1 534 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 PLA2G4FQ68DD2 849 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 RINT1Q6NUQ1 792 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 CAGE1Q8TC20 777 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 LMBR1Q8WVP7 490 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 TOX2Q96NM4 488 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 PLIN2Q99541 437 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 HTATIP2Q9BUP3 242 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 SENP6Q9GZR1 1112 aaPredicted RBP10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 NUP62CLQ9H1M0 184 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 PARVGQ9HBI0 331 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 HDAC6Q9UBN7 1215 aa10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 TRIP12Q14669 1992 aaPredicted RBP10.83□□□□□ -0.68
SMARCD1-206ENST00000549274 A0A087X0B3 334 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 IGKV6-21A0A0C4DH24 114 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 C22orf31O95567 290 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 MAPTP10636 758 aaKnown RBP10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 COL6A1P12109 1028 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 PSMC6P62333 389 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 IGBP1P78318 339 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 ASIC1P78348 528 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 ADAM17P78536 824 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms