RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 LENG9Q96B70 501 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 C8orf76Q96K31 380 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 MBOAT7Q96N66 472 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 ZNF577Q9BSK1 485 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 PLVAPQ9BX97 442 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 IGFLR1Q9H665 355 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 TBC1D22BQ9NU19 505 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 CLEC1BQ9P126 229 aa17.77■□□□□ 0.44
CHMP1A-206ENST00000549139 LOC730098B7Z3J9 87 aa17.76■□□□□ 0.43
CHMP1A-206ENST00000549139 ENPP3O14638 875 aa17.76■□□□□ 0.43
CHMP1A-206ENST00000549139 ATG7O95352 703 aa17.76■□□□□ 0.43
CHMP1A-206ENST00000549139 DNAJB1P25685 340 aa17.76■□□□□ 0.43
CHMP1A-206ENST00000549139 MGAT3Q09327 533 aa17.76■□□□□ 0.43
CHMP1A-206ENST00000549139 CBX2Q14781 532 aaPredicted RBP17.76■□□□□ 0.43
CHMP1A-206ENST00000549139 PIK3AP1Q6ZUJ8 805 aa17.76■□□□□ 0.43
CHMP1A-206ENST00000549139 NEK8Q86SG6 692 aa17.76■□□□□ 0.43
CHMP1A-206ENST00000549139 TRIM50Q86XT4 487 aa17.76■□□□□ 0.43
CHMP1A-206ENST00000549139 PBXIP1Q96AQ6 731 aa17.76■□□□□ 0.43
CHMP1A-206ENST00000549139 PLAGL2Q9UPG8 496 aa17.76■□□□□ 0.43
CHMP1A-206ENST00000549139 BTBD18B2RXH4 712 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 DGKIO75912 1065 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 GHRP10912 638 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 ACTR2P61160 394 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 ZXDAP98168 799 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 NR5A1Q13285 461 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 LPIN1Q14693 890 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 UTP14CQ5TAP6 766 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 PPP4R3AQ6IN85 833 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 DIS3L2Q8IYB7 885 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 CRIPAKQ8N1N5 446 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 SMRP1Q8NCR6 262 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 FBXO18Q8NFZ0 1043 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 P2RX5Q93086 422 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 NAP1L4Q99733 375 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 PRRX2Q99811 253 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 SMARCAD1Q9H4L7 1026 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 ZNF215Q9UL58 517 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 DMDP11532 3685 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 KIAA1671Q9BY89 1806 aa17.75■□□□□ 0.43
CHMP1A-206ENST00000549139 GVINP1Q7Z2Y8 2422 aa17.74■□□□□ 0.43
CHMP1A-206ENST00000549139 MSH4O15457 936 aa17.74■□□□□ 0.43
CHMP1A-206ENST00000549139 FOSBP53539 338 aa17.74■□□□□ 0.43
CHMP1A-206ENST00000549139 COASYQ13057 564 aa17.74■□□□□ 0.43
CHMP1A-206ENST00000549139 BTG3Q14201 252 aaPredicted RBP17.74■□□□□ 0.43
CHMP1A-206ENST00000549139 SAFBQ15424 915 aaKnown RBP eCLIP17.74■□□□□ 0.43
CHMP1A-206ENST00000549139 LETM2Q2VYF4 491 aa17.74■□□□□ 0.43
CHMP1A-206ENST00000549139 EARS2Q5JPH6 523 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-206ENST00000549139 RUFY4Q6ZNE9 571 aa17.74■□□□□ 0.43
CHMP1A-206ENST00000549139 ADGRD2Q7Z7M1 963 aa17.74■□□□□ 0.43
CHMP1A-206ENST00000549139 EFHBQ8N7U6 833 aa17.74■□□□□ 0.43
CHMP1A-206ENST00000549139 RIT2Q99578 217 aa17.74■□□□□ 0.43
CHMP1A-206ENST00000549139 KIF3AQ9Y496 699 aa17.74■□□□□ 0.43
CHMP1A-206ENST00000549139 NRCAMQ92823 1304 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 IGKV6D-21A0A0A0MT36 114 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 DDX39AO00148 427 aaKnown RBP17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 TDP2O95551 362 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 CCNE2O96020 404 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 ITGB1P05556 798 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 GCFC2P16383 781 aaKnown RBP17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 NDUFV1P49821 464 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 GUCY1B3Q02153 619 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 ZNF746Q6NUN9 644 aaPredicted RBP17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 ABHD15Q6UXT9 468 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 PLPPR4Q7Z2D5 763 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 FBXL6Q8N531 539 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 SPPL3Q8TCT6 385 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 LINC01599Q8WXQ3 324 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 SLC5A5Q92911 643 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 PCYT2Q99447 389 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 ERAP1Q9NZ08 941 aa17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 DDX25Q9UHL0 483 aaKnown RBP17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 MRPL42Q9Y6G3 142 aaKnown RBP17.73■□□□□ 0.43
CHMP1A-206ENST00000549139 CSPG5O95196 566 aa17.72■□□□□ 0.43
CHMP1A-206ENST00000549139 GLP2RO95838 553 aa17.72■□□□□ 0.43
CHMP1A-206ENST00000549139 STAT5BP51692 787 aa17.72■□□□□ 0.43
CHMP1A-206ENST00000549139 KRT76Q01546 638 aa17.72■□□□□ 0.43
CHMP1A-206ENST00000549139 NAALADL2Q58DX5 795 aa17.72■□□□□ 0.43
CHMP1A-206ENST00000549139 FBXO47Q5MNV8 452 aa17.72■□□□□ 0.43
CHMP1A-206ENST00000549139 TAF2Q6P1X5 1199 aa17.72■□□□□ 0.43
CHMP1A-206ENST00000549139 SMAP1Q8IYB5 467 aaPredicted RBP17.72■□□□□ 0.43
CHMP1A-206ENST00000549139 GLG1Q92896 1179 aa17.72■□□□□ 0.43
CHMP1A-206ENST00000549139 FOXP1Q9H334 677 aaPredicted RBP17.72■□□□□ 0.43
CHMP1A-206ENST00000549139 AZI2Q9H6S1 392 aa17.72■□□□□ 0.43
CHMP1A-206ENST00000549139 FAM205CA6NFA0 338 aa17.71■□□□□ 0.43
CHMP1A-206ENST00000549139 CCNT1O60563 726 aaKnown RBP17.71■□□□□ 0.43
CHMP1A-206ENST00000549139 PSMD10O75832 226 aa17.71■□□□□ 0.43
CHMP1A-206ENST00000549139 CUL4AQ13619 759 aa17.71■□□□□ 0.43
CHMP1A-206ENST00000549139 MIS18BP1Q6P0N0 1132 aa17.71■□□□□ 0.43
CHMP1A-206ENST00000549139 RTN4RL1Q86UN2 441 aaPredicted RBP17.71■□□□□ 0.43
CHMP1A-206ENST00000549139 SUGP1Q8IWZ8 645 aaKnown RBP17.71■□□□□ 0.43
CHMP1A-206ENST00000549139 ETNPPLQ8TBG4 499 aa17.71■□□□□ 0.43
CHMP1A-206ENST00000549139 TNPO1Q92973 898 aaKnown RBP17.71■□□□□ 0.43
CHMP1A-206ENST00000549139 ASIC4Q96FT7 647 aa17.71■□□□□ 0.43
CHMP1A-206ENST00000549139 AGO3Q9H9G7 860 aaKnown RBP17.71■□□□□ 0.43
CHMP1A-206ENST00000549139 TCEAL9Q9UHQ7 104 aa17.71■□□□□ 0.43
CHMP1A-206ENST00000549139 PCDHA10Q9Y5I2 948 aa17.71■□□□□ 0.43
CHMP1A-206ENST00000549139 MBLAC1A4D2B0 266 aaPredicted RBP17.7■□□□□ 0.42
CHMP1A-206ENST00000549139 TBX3O15119 743 aa17.7■□□□□ 0.42
CHMP1A-206ENST00000549139 SLC37A4O43826 429 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms