RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 RBM19Q9Y4C8 960 aaKnown RBP10.72□□□□□ -0.69
RAB5B-205ENST00000549034 SRPRBQ9Y5M8 271 aaKnown RBP10.72□□□□□ -0.69
RAB5B-205ENST00000549034 TCHHQ07283 1943 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 LOXHD1Q8IVV2 1947 aa10.72□□□□□ -0.69
RAB5B-205ENST00000549034 SPTLC2O15270 562 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 CAND2O75155 1236 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 MAFO75444 373 aaPredicted RBP10.71□□□□□ -0.69
RAB5B-205ENST00000549034 PARNO95453 639 aaKnown RBP10.71□□□□□ -0.69
RAB5B-205ENST00000549034 NCLP19338 710 aaKnown RBP10.71□□□□□ -0.69
RAB5B-205ENST00000549034 MUTP22033 750 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 RFC2P35250 354 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 CLCN3P51790 818 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 POLGP54098 1239 aaPredicted RBP10.71□□□□□ -0.69
RAB5B-205ENST00000549034 EPHB4P54760 987 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 MRPS6P82932 125 aaKnown RBP10.71□□□□□ -0.69
RAB5B-205ENST00000549034 RBL2Q08999 1139 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 SHHQ15465 462 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 FAM26DQ5JW98 314 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 ATL3Q6DD88 541 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 POTEGQ6S5H5 508 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 ZNF365Q70YC5 407 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 C16orf59Q7L2K0 433 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 RPAINQ86UA6 219 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 CABP7Q86V35 215 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 KRI1Q8N9T8 703 aaKnown RBP10.71□□□□□ -0.69
RAB5B-205ENST00000549034 SLC7A3Q8WY07 619 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 CALML4Q96GE6 196 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 CDK5RAP3Q96JB5 506 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 AK8Q96MA6 479 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 CLIC6Q96NY7 704 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 CEP89Q96ST8 783 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 PPP1R16BQ96T49 567 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 JPH2Q9BR39 696 aaPredicted RBP10.71□□□□□ -0.69
RAB5B-205ENST00000549034 MMTAG2Q9BU76 263 aaKnown RBP10.71□□□□□ -0.69
RAB5B-205ENST00000549034 CELF4Q9BZC1 486 aaKnown RBP10.71□□□□□ -0.69
RAB5B-205ENST00000549034 BMP2KQ9NSY1 1161 aaPredicted RBP10.71□□□□□ -0.69
RAB5B-205ENST00000549034 DDX19AQ9NUU7 478 aaKnown RBP10.71□□□□□ -0.69
RAB5B-205ENST00000549034 SUCLA2Q9P2R7 463 aaPredicted RBP10.71□□□□□ -0.69
RAB5B-205ENST00000549034 FBXO2Q9UK22 296 aaPredicted RBP10.71□□□□□ -0.69
RAB5B-205ENST00000549034 GINS2Q9Y248 185 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 MYH15Q9Y2K3 1946 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 ATP6V1DQ9Y5K8 247 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 CDY2AQ9Y6F7 541 aa10.71□□□□□ -0.69
RAB5B-205ENST00000549034 DNAH12Q6ZR08 3092 aa10.71□□□□□ -0.7
RAB5B-205ENST00000549034 ARHGEF35A5YM69 484 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 E9PMD0 336 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 NBNO60934 754 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 YEATS4O95619 227 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 VTNP04004 478 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 RPLP2P05387 115 aaKnown RBP10.7□□□□□ -0.7
RAB5B-205ENST00000549034 RFC5P40937 340 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 NASPP49321 788 aaPredicted RBP10.7□□□□□ -0.7
RAB5B-205ENST00000549034 RARRES1P49788 294 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 NLRP11P59045 1033 aaKnown RBP10.7□□□□□ -0.7
RAB5B-205ENST00000549034 GPNMBQ14956 572 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 TRAF7Q6Q0C0 670 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 MAEAQ7L5Y9 396 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 OTOP2Q7RTS6 562 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 RASSF8Q8NHQ8 419 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 TMEM143Q96AN5 459 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 FAM212AQ96EL1 285 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 EPSTI1Q96J88 318 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 ZNF668Q96K58 619 aaPredicted RBP10.7□□□□□ -0.7
RAB5B-205ENST00000549034 MAP7D2Q96T17 732 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 MTRQ99707 1265 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.7□□□□□ -0.75e-10■■■□□ 15.3
RAB5B-205ENST00000549034 PANK2Q9BZ23 570 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 OSBPL7Q9BZF2 842 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 CDHR5Q9HBB8 845 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 TSHZ2Q9NRE2 1034 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 DBR1Q9UK59 544 aaKnown RBP10.7□□□□□ -0.7
RAB5B-205ENST00000549034 PPME1Q9Y570 386 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 TRPV2Q9Y5S1 764 aa10.7□□□□□ -0.7
RAB5B-205ENST00000549034 TET1Q8NFU7 2136 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 IGKV6-21A0A0C4DH24 114 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 RBAK-RBAKDNI3L0D1 243 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 PPP6R2O75170 966 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 DGAT1O75907 488 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 EYA4O95677 639 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 GHRP10912 638 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 ACTN1P12814 892 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 KRT85P78386 507 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 CDC42EP1Q00587 391 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 MGAT3Q09327 533 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 GRB10Q13322 594 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 DRP2Q13474 957 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 MBTPS1Q14703 1052 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 KIZQ2M2Z5 673 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 TMEM240Q5SV17 173 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 C9orf50Q5SZB4 431 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 PADI6Q6TGC4 694 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 USP49Q70CQ1 688 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 RHPN2Q8IUC4 686 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 TCP11Q8WWU5 503 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 CHAMP1Q96JM3 812 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 PNMA5Q96PV4 448 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 NT5C3AQ9H0P0 336 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 BHMT2Q9H2M3 363 aa10.69□□□□□ -0.7
RAB5B-205ENST00000549034 DHX33Q9H6R0 707 aaKnown RBP10.69□□□□□ -0.7
RAB5B-205ENST00000549034 CCDC39Q9UFE4 941 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms