RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 TLR9Q9NR96 1032 aa14.58□□□□□ -0.08
PTCH1-218ENST00000548945 TMEM161AQ9NX61 479 aa14.58□□□□□ -0.08
PTCH1-218ENST00000548945 TCEAL9Q9UHQ7 104 aa14.58□□□□□ -0.08
PTCH1-218ENST00000548945 PCDHA10Q9Y5I2 948 aa14.58□□□□□ -0.08
PTCH1-218ENST00000548945 TBKBP1A7MCY6 615 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 PRPF3O43395 683 aaKnown RBP14.57□□□□□ -0.08
PTCH1-218ENST00000548945 GPR32O75388 356 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 CDC45O75419 566 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 CSPG5O95196 566 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 CIITAP33076 1130 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 GATMP50440 423 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 FGD1P98174 961 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 KIZQ2M2Z5 673 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 SPOUT1Q5T280 376 aaKnown RBP14.57□□□□□ -0.08
PTCH1-218ENST00000548945 CENPQQ7L2Z9 268 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-218ENST00000548945 BICD2Q8TD16 824 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 KCNB2Q92953 911 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 FAM167AQ96KS9 214 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 MFSD14AQ96MC6 490 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 TLE6Q9H808 572 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 ATP6V0A4Q9HBG4 840 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 LZTS1Q9Y250 596 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 GTF3C3Q9Y5Q9 886 aa14.57□□□□□ -0.08
PTCH1-218ENST00000548945 LOC730098B7Z3J9 87 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 HOXA2O43364 376 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 FGF18O76093 207 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 GLP2RO95838 553 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 LAG3P18627 525 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 TMOD1P28289 359 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 DSC3Q14574 896 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 CBX2Q14781 532 aaPredicted RBP14.56□□□□□ -0.08
PTCH1-218ENST00000548945 PKN1Q16512 942 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 FAM102BQ5T8I3 360 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 HFE2Q6ZVN8 426 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 FAM228AQ86W67 206 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 COLGALT1Q8NBJ5 622 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 EDAQ92838 391 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 OSMRQ99650 979 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 MUTYHQ9UIF7 546 aa14.56□□□□□ -0.08
PTCH1-218ENST00000548945 NAP1L2Q9ULW6 460 aaPredicted RBP14.56□□□□□ -0.08
PTCH1-218ENST00000548945 WDR64B1ANS9 1081 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 FSCN2O14926 492 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 VTNP04004 478 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 ATF7P17544 494 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-218ENST00000548945 PLCB3Q01970 1234 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 BMP8AQ7Z5Y6 402 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 RBM23Q86U06 439 aaKnown RBP14.55□□□□□ -0.08
PTCH1-218ENST00000548945 THNSL1Q8IYQ7 743 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 METTL13Q8N6R0 699 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 LINC01465Q8N7H1 131 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 CCDC148Q8NFR7 591 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 MICAL1Q8TDZ2 1067 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 LENG9Q96B70 501 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 MAP7D2Q96T17 732 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 AGXT2Q9BYV1 514 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 TMEM117Q9H0C3 514 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 CWH43Q9H720 699 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 TYW1Q9NV66 732 aaKnown RBP14.55□□□□□ -0.08
PTCH1-218ENST00000548945 GABBR1Q9UBS5 961 aa14.55□□□□□ -0.08
PTCH1-218ENST00000548945 PPFIA3O75145 1194 aa14.54□□□□□ -0.08
PTCH1-218ENST00000548945 SRGAP2BP0DMP2 458 aa14.54□□□□□ -0.08
PTCH1-218ENST00000548945 AKAP17AQ02040 695 aaKnown RBP14.54□□□□□ -0.08
PTCH1-218ENST00000548945 APOBRQ0VD83 1088 aa14.54□□□□□ -0.08
PTCH1-218ENST00000548945 DUSP6Q16828 381 aa14.54□□□□□ -0.08
PTCH1-218ENST00000548945 PRR16Q569H4 304 aa14.54□□□□□ -0.08
PTCH1-218ENST00000548945 TMEM184AQ6ZMB5 413 aa14.54□□□□□ -0.08
PTCH1-218ENST00000548945 Q6ZUG5 572 aa14.54□□□□□ -0.08
PTCH1-218ENST00000548945 RASGRP4Q8TDF6 673 aa14.54□□□□□ -0.08
PTCH1-218ENST00000548945 BRF1Q92994 677 aa14.54□□□□□ -0.08
PTCH1-218ENST00000548945 RIT2Q99578 217 aa14.54□□□□□ -0.08
PTCH1-218ENST00000548945 PHF7Q9BWX1 381 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-218ENST00000548945 RNF26Q9BY78 433 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-218ENST00000548945 ADAMTS10Q9H324 1103 aa14.54□□□□□ -0.08
PTCH1-218ENST00000548945 PUF60Q9UHX1 559 aaKnown RBP14.54□□□□□ -0.08
PTCH1-218ENST00000548945 BARX2Q9UMQ3 279 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-218ENST00000548945 USP15Q9Y4E8 981 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-218ENST00000548945 SAMM50Q9Y512 469 aa14.54□□□□□ -0.08
PTCH1-218ENST00000548945 PCDHGC5Q9Y5F6 944 aa14.54□□□□□ -0.08
PTCH1-218ENST00000548945 ADAMTS3O15072 1205 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 FGFR1P11362 822 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 IBSPP21815 317 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-218ENST00000548945 EIF4BP23588 611 aaKnown RBP14.53□□□□□ -0.08
PTCH1-218ENST00000548945 SFNP31947 248 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 HSPA4P34932 840 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 PPM1AP35813 382 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 USP11P51784 963 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 CLCN3P51790 818 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 NLRP11P59045 1033 aaKnown RBP14.53□□□□□ -0.08
PTCH1-218ENST00000548945 ERVFC1P60507 584 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 NHLH1Q02575 133 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 NTRK3Q16288 839 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 EFCAB12Q6NXP0 572 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 BLOC1S2Q6QNY1 142 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 LRRC43Q8N309 656 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 SUSD6Q92537 303 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 MRPS27Q92552 414 aaKnown RBP14.53□□□□□ -0.08
PTCH1-218ENST00000548945 FBXL18Q96ME1 805 aa14.53□□□□□ -0.08
PTCH1-218ENST00000548945 JAKMIP1Q96N16 626 aaKnown RBP14.53□□□□□ -0.08
PTCH1-218ENST00000548945 NGRNQ9NPE2 291 aaKnown RBP14.53□□□□□ -0.08
PTCH1-218ENST00000548945 SH3GLB2Q9NR46 395 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms