RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 DRP2Q13474 957 aa17.7■□□□□ 0.42
DDX54-205ENST00000548786 TTC38Q5R3I4 469 aa17.7■□□□□ 0.42
DDX54-205ENST00000548786 ANO5Q75V66 913 aa17.7■□□□□ 0.42
DDX54-205ENST00000548786 ZNF579Q8NAF0 562 aaKnown RBP17.7■□□□□ 0.42
DDX54-205ENST00000548786 TMEM40Q8WWA1 233 aa17.7■□□□□ 0.42
DDX54-205ENST00000548786 ARNTL2Q8WYA1 636 aa17.7■□□□□ 0.42
DDX54-205ENST00000548786 SCLT1Q96NL6 688 aa17.7■□□□□ 0.42
DDX54-205ENST00000548786 MAP7D2Q96T17 732 aa17.7■□□□□ 0.42
DDX54-205ENST00000548786 SMC3Q9UQE7 1217 aa17.7■□□□□ 0.42
DDX54-205ENST00000548786 NOC2LQ9Y3T9 749 aaKnown RBP17.7■□□□□ 0.42
DDX54-205ENST00000548786 ZBTB39O15060 712 aa17.69■□□□□ 0.42
DDX54-205ENST00000548786 P4HBP07237 508 aaKnown RBP17.69■□□□□ 0.42
DDX54-205ENST00000548786 IGFBP4P22692 258 aa17.69■□□□□ 0.42
DDX54-205ENST00000548786 TMOD1P28289 359 aa17.69■□□□□ 0.42
DDX54-205ENST00000548786 NLRP11P59045 1033 aaKnown RBP17.69■□□□□ 0.42
DDX54-205ENST00000548786 EPHA7Q15375 998 aa17.69■□□□□ 0.42
DDX54-205ENST00000548786 TPH2Q8IWU9 490 aa17.69■□□□□ 0.42
DDX54-205ENST00000548786 LINC01599Q8WXQ3 324 aa17.69■□□□□ 0.42
DDX54-205ENST00000548786 PPM1EQ8WY54 764 aa17.69■□□□□ 0.42
DDX54-205ENST00000548786 MTMR9Q96QG7 549 aa17.69■□□□□ 0.42
DDX54-205ENST00000548786 YME1L1Q96TA2 773 aa17.69■□□□□ 0.42
DDX54-205ENST00000548786 GAS2L1Q99501 681 aaPredicted RBP17.69■□□□□ 0.42
DDX54-205ENST00000548786 RAD9AQ99638 391 aa17.69■□□□□ 0.42
DDX54-205ENST00000548786 NIFKQ9BYG3 293 aaKnown RBP17.69■□□□□ 0.42
DDX54-205ENST00000548786 KIF3AQ9Y496 699 aa17.69■□□□□ 0.42
DDX54-205ENST00000548786 MYO9BQ13459 2157 aa17.69■□□□□ 0.42
DDX54-205ENST00000548786 EPOPA6NHQ4 379 aa17.68■□□□□ 0.42
DDX54-205ENST00000548786 H3BQV1 296 aa17.68■□□□□ 0.42
DDX54-205ENST00000548786 GPR32O75388 356 aa17.68■□□□□ 0.42
DDX54-205ENST00000548786 RPS6KA5O75582 802 aa17.68■□□□□ 0.42
DDX54-205ENST00000548786 TARBP2Q15633 366 aaKnown RBP17.68■□□□□ 0.42
DDX54-205ENST00000548786 LINC01465Q8N7H1 131 aa17.68■□□□□ 0.42
DDX54-205ENST00000548786 MAFAQ8NHW3 353 aaPredicted RBP17.68■□□□□ 0.42
DDX54-205ENST00000548786 CEP170P1Q96L14 293 aa17.68■□□□□ 0.42
DDX54-205ENST00000548786 EIF2AK1Q9BQI3 630 aaKnown RBP17.68■□□□□ 0.42
DDX54-205ENST00000548786 TMX1Q9H3N1 280 aa17.68■□□□□ 0.42
DDX54-205ENST00000548786 NOL7Q9UMY1 257 aaKnown RBP17.68■□□□□ 0.42
DDX54-205ENST00000548786 KDM3AQ9Y4C1 1321 aa17.68■□□□□ 0.42
DDX54-205ENST00000548786 TRANK1O15050 2925 aa17.68■□□□□ 0.42
DDX54-205ENST00000548786 A0A087WWV3 80 aa17.67■□□□□ 0.42
DDX54-205ENST00000548786 ENPP3O14638 875 aa17.67■□□□□ 0.42
DDX54-205ENST00000548786 CSDE1O75534 798 aaKnown RBP17.67■□□□□ 0.42
DDX54-205ENST00000548786 OR52Z1P0C646 297 aa17.67■□□□□ 0.42
DDX54-205ENST00000548786 YWHABP31946 246 aaKnown RBP17.67■□□□□ 0.42
DDX54-205ENST00000548786 TECP42680 631 aa17.67■□□□□ 0.42
DDX54-205ENST00000548786 ADGRE1Q14246 886 aa17.67■□□□□ 0.42
DDX54-205ENST00000548786 MICALL1Q8N3F8 863 aa17.67■□□□□ 0.42
DDX54-205ENST00000548786 NLRP7Q8WX94 980 aa17.67■□□□□ 0.42
DDX54-205ENST00000548786 TOP1MTQ969P6 601 aa17.67■□□□□ 0.42
DDX54-205ENST00000548786 CEP89Q96ST8 783 aa17.67■□□□□ 0.42
DDX54-205ENST00000548786 CYP26B1Q9NR63 512 aa17.67■□□□□ 0.42
DDX54-205ENST00000548786 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
DDX54-205ENST00000548786 LINC01553A4QN01 128 aa17.66■□□□□ 0.42
DDX54-205ENST00000548786 MGEA5O60502 916 aa17.66■□□□□ 0.42
DDX54-205ENST00000548786 FGFR4P22455 802 aa17.66■□□□□ 0.42
DDX54-205ENST00000548786 U2AF2P26368 475 aaKnown RBP eCLIP17.66■□□□□ 0.42
DDX54-205ENST00000548786 TOB1P50616 345 aaPredicted RBP17.66■□□□□ 0.42
DDX54-205ENST00000548786 CRYBB1P53674 252 aaPredicted RBP17.66■□□□□ 0.42
DDX54-205ENST00000548786 XKR9Q5GH70 373 aa17.66■□□□□ 0.42
DDX54-205ENST00000548786 RTN4RL1Q86UN2 441 aaPredicted RBP17.66■□□□□ 0.42
DDX54-205ENST00000548786 FAM228AQ86W67 206 aa17.66■□□□□ 0.42
DDX54-205ENST00000548786 USP38Q8NB14 1042 aa17.66■□□□□ 0.42
DDX54-205ENST00000548786 ADAMTS10Q9H324 1103 aa17.66■□□□□ 0.42
DDX54-205ENST00000548786 ZSWIM4Q9H7M6 989 aa17.66■□□□□ 0.42
DDX54-205ENST00000548786 ERVK-5Q9HDB9 667 aa17.66■□□□□ 0.42
DDX54-205ENST00000548786 ST3GAL5Q9UNP4 418 aa17.66■□□□□ 0.42
DDX54-205ENST00000548786 INSL6Q9Y581 213 aa17.66■□□□□ 0.42
DDX54-205ENST00000548786 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.66■□□□□ 0.42
DDX54-205ENST00000548786 PCDHB6Q9Y5E3 794 aa17.66■□□□□ 0.42
DDX54-205ENST00000548786 PRUNE2Q8WUY3 3088 aa17.66■□□□□ 0.42
DDX54-205ENST00000548786 DENND3A2RUS2 1198 aa17.65■□□□□ 0.42
DDX54-205ENST00000548786 DKC1O60832 514 aaKnown RBP eCLIP17.65■□□□□ 0.42
DDX54-205ENST00000548786 SLITRK3O94933 977 aa17.65■□□□□ 0.42
DDX54-205ENST00000548786 GPC3P51654 580 aa17.65■□□□□ 0.42
DDX54-205ENST00000548786 POLGP54098 1239 aaPredicted RBP17.65■□□□□ 0.42
DDX54-205ENST00000548786 CCDC85BQ15834 202 aaPredicted RBP17.65■□□□□ 0.42
DDX54-205ENST00000548786 RHPN2Q8IUC4 686 aa17.65■□□□□ 0.42
DDX54-205ENST00000548786 KSR1Q8IVT5 923 aa17.65■□□□□ 0.42
DDX54-205ENST00000548786 C4orf19Q8IY42 314 aa17.65■□□□□ 0.42
DDX54-205ENST00000548786 IL27Q8NEV9 243 aa17.65■□□□□ 0.42
DDX54-205ENST00000548786 GDPD5Q8WTR4 605 aa17.65■□□□□ 0.42
DDX54-205ENST00000548786 TMEM143Q96AN5 459 aa17.65■□□□□ 0.42
DDX54-205ENST00000548786 C17orf80Q9BSJ5 609 aa17.65■□□□□ 0.42
DDX54-205ENST00000548786 SUCLA2Q9P2R7 463 aaPredicted RBP17.65■□□□□ 0.42
DDX54-205ENST00000548786 SQORQ9Y6N5 450 aa17.65■□□□□ 0.42
DDX54-205ENST00000548786 COL4A4P53420 1690 aaPredicted RBP17.64■□□□□ 0.42
DDX54-205ENST00000548786 MAFO75444 373 aaPredicted RBP17.64■□□□□ 0.41
DDX54-205ENST00000548786 DNM2P50570 870 aa17.64■□□□□ 0.41
DDX54-205ENST00000548786 HTRA4P83105 476 aaPredicted RBP17.64■□□□□ 0.41
DDX54-205ENST00000548786 LARP1BQ659C4 914 aaKnown RBP17.64■□□□□ 0.41
DDX54-205ENST00000548786 PIGOQ8TEQ8 1089 aa17.64■□□□□ 0.41
DDX54-205ENST00000548786 SLC7A3Q8WY07 619 aa17.64■□□□□ 0.41
DDX54-205ENST00000548786 NLRP4Q96MN2 994 aa17.64■□□□□ 0.41
DDX54-205ENST00000548786 CCDC43Q96MW1 224 aaKnown RBP17.64■□□□□ 0.41
DDX54-205ENST00000548786 ADAM2Q99965 735 aa17.64■□□□□ 0.41
DDX54-205ENST00000548786 FTHL17Q9BXU8 183 aa17.64■□□□□ 0.41
DDX54-205ENST00000548786 ARID2Q68CP9 1835 aa17.63■□□□□ 0.41
DDX54-205ENST00000548786 A0A087WZ62 844 aa17.63■□□□□ 0.41
DDX54-205ENST00000548786 IGKV6-21A0A0C4DH24 114 aa17.63■□□□□ 0.41
DDX54-205ENST00000548786 GPR182O15218 404 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms