RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 OSMRQ99650 979 aa13.25□□□□□ -0.29
RAB5C-204ENST00000547517 ZBED2Q9BTP6 218 aa13.25□□□□□ -0.29
RAB5C-204ENST00000547517 SLC28A3Q9HAS3 691 aa13.25□□□□□ -0.29
RAB5C-204ENST00000547517 EVPLQ92817 2033 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 VPS37CA5D8V6 355 aaPredicted RBP13.24□□□□□ -0.29
RAB5C-204ENST00000547517 GJB5O95377 273 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 YWHABP31946 246 aaKnown RBP13.24□□□□□ -0.29
RAB5C-204ENST00000547517 NPEPPSP55786 919 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 DRP2Q13474 957 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 GRIN2CQ14957 1233 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 C4orf19Q8IY42 314 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 USP38Q8NB14 1042 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 NEK9Q8TD19 979 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 ZNF668Q96K58 619 aaPredicted RBP13.24□□□□□ -0.29
RAB5C-204ENST00000547517 CEP170P1Q96L14 293 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 CEP89Q96ST8 783 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 ZSWIM4Q9H7M6 989 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 CDHR5Q9HBB8 845 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 CYP26B1Q9NR63 512 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 BMP2KQ9NSY1 1161 aaPredicted RBP13.24□□□□□ -0.29
RAB5C-204ENST00000547517 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 PCDHB6Q9Y5E3 794 aa13.24□□□□□ -0.29
RAB5C-204ENST00000547517 ARID2Q68CP9 1835 aa13.23□□□□□ -0.29
RAB5C-204ENST00000547517 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.23□□□□□ -0.29
RAB5C-204ENST00000547517 LCHNA4D1U4 455 aa13.23□□□□□ -0.29
RAB5C-204ENST00000547517 GPR32O75388 356 aa13.23□□□□□ -0.29
RAB5C-204ENST00000547517 RPS6KA5O75582 802 aa13.23□□□□□ -0.29
RAB5C-204ENST00000547517 SLITRK3O94933 977 aa13.23□□□□□ -0.29
RAB5C-204ENST00000547517 ARHGEF15O94989 841 aa13.23□□□□□ -0.29
RAB5C-204ENST00000547517 UPP2O95045 317 aa13.23□□□□□ -0.29
RAB5C-204ENST00000547517 TECP42680 631 aa13.23□□□□□ -0.29
RAB5C-204ENST00000547517 CRYBB1P53674 252 aaPredicted RBP13.23□□□□□ -0.29
RAB5C-204ENST00000547517 POLGP54098 1239 aaPredicted RBP13.23□□□□□ -0.29
RAB5C-204ENST00000547517 NLRP11P59045 1033 aaKnown RBP13.23□□□□□ -0.29
RAB5C-204ENST00000547517 NFX1Q12986 1120 aaKnown RBP13.23□□□□□ -0.29
RAB5C-204ENST00000547517 XKR9Q5GH70 373 aa13.23□□□□□ -0.29
RAB5C-204ENST00000547517 ZNF579Q8NAF0 562 aaKnown RBP13.23□□□□□ -0.29
RAB5C-204ENST00000547517 LINC01599Q8WXQ3 324 aa13.23□□□□□ -0.29
RAB5C-204ENST00000547517 MYLIPQ8WY64 445 aa13.23□□□□□ -0.29
RAB5C-204ENST00000547517 CDX2Q99626 313 aaPredicted RBP13.23□□□□□ -0.29
RAB5C-204ENST00000547517 PADI3Q9ULW8 664 aa13.23□□□□□ -0.29
RAB5C-204ENST00000547517 NOC2LQ9Y3T9 749 aaKnown RBP13.23□□□□□ -0.29
RAB5C-204ENST00000547517 SQORQ9Y6N5 450 aa13.23□□□□□ -0.29
RAB5C-204ENST00000547517 LOXHD1Q8IVV2 1947 aa13.23□□□□□ -0.29
RAB5C-204ENST00000547517 CHD9Q3L8U1 2897 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 ZBTB39O15060 712 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 MAFO75444 373 aaPredicted RBP13.22□□□□□ -0.29
RAB5C-204ENST00000547517 IBSPP21815 317 aaPredicted RBP13.22□□□□□ -0.29
RAB5C-204ENST00000547517 GPC3P51654 580 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 PTGDRQ13258 359 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 RILPL1Q5EBL4 403 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 OTUD6AQ7L8S5 288 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 FAM228AQ86W67 206 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 HSCBQ8IWL3 235 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 NLRP7Q8WX94 980 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 SLC7A3Q8WY07 619 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 CCDC43Q96MW1 224 aaKnown RBP13.22□□□□□ -0.29
RAB5C-204ENST00000547517 HSD17B14Q9BPX1 270 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 JPH2Q9BR39 696 aaPredicted RBP13.22□□□□□ -0.29
RAB5C-204ENST00000547517 ADAMTS10Q9H324 1103 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 TMX1Q9H3N1 280 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 PRDM12Q9H4Q4 367 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 ERVK-5Q9HDB9 667 aa13.22□□□□□ -0.29
RAB5C-204ENST00000547517 IGKV6-21A0A0C4DH24 114 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 MED24O75448 989 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 FOSL2P15408 326 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 RFC5P40937 340 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 DNM2P50570 870 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 TAP1Q03518 808 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 EMC2Q15006 297 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 FERMT3Q86UX7 667 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 C4orf32Q8N8J7 132 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 ERMNQ8TAM6 284 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 NLRP4Q96MN2 994 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 YME1L1Q96TA2 773 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 RAD9AQ99638 391 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 FTHL17Q9BXU8 183 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 CERS4Q9HA82 394 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.21□□□□□ -0.29
RAB5C-204ENST00000547517 SUCLA2Q9P2R7 463 aaPredicted RBP13.21□□□□□ -0.29
RAB5C-204ENST00000547517 ST3GAL5Q9UNP4 418 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 STXBP5LQ9Y2K9 1186 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 PPME1Q9Y570 386 aa13.21□□□□□ -0.29
RAB5C-204ENST00000547517 CUL9Q8IWT3 2517 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 CHD7Q9P2D1 2997 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 GPR182O15218 404 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 LYPLA2O95372 231 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 PDCP20941 246 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 FXR2P51116 673 aaKnown RBP eCLIP13.2□□□□□ -0.3
RAB5C-204ENST00000547517 ODR4Q5SWX8 454 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 HAUS3Q68CZ6 603 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 POTEGQ6S5H5 508 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 SPRED2Q7Z698 418 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 CATSPER3Q86XQ3 398 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 RHPN2Q8IUC4 686 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 PIGOQ8TEQ8 1089 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 TOP1MTQ969P6 601 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 SNX21Q969T3 373 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 TMEM143Q96AN5 459 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 INTS4Q96HW7 963 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms