RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 FTHL17Q9BXU8 183 aa11.64□□□□□ -0.55
BEST3-208ENST00000547208 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
BEST3-208ENST00000547208 CD320Q9NPF0 282 aa11.64□□□□□ -0.55
BEST3-208ENST00000547208 C11orf16Q9NQ32 467 aa11.64□□□□□ -0.55
BEST3-208ENST00000547208 NOC2LQ9Y3T9 749 aaKnown RBP11.64□□□□□ -0.55
BEST3-208ENST00000547208 SAMM50Q9Y512 469 aa11.64□□□□□ -0.55
BEST3-208ENST00000547208 FAM205CA6NFA0 338 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 C5orf67F2Z3F1 127 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 H3BNC9 293 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 MGEA5O60502 916 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 VTNP04004 478 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 CENPBP07199 599 aaPredicted RBP11.63□□□□□ -0.55
BEST3-208ENST00000547208 PAK2Q13177 524 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 TARBP2Q15633 366 aaKnown RBP11.63□□□□□ -0.55
BEST3-208ENST00000547208 TRMT1LQ7Z2T5 733 aaKnown RBP11.63□□□□□ -0.55
BEST3-208ENST00000547208 NSUN7Q8NE18 718 aaKnown RBP11.63□□□□□ -0.55
BEST3-208ENST00000547208 RDM1Q8NG50 284 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 CLP1Q92989 425 aaKnown RBP11.63□□□□□ -0.55
BEST3-208ENST00000547208 TNFRSF25Q93038 417 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 FAM122AQ96E09 287 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 FAM167AQ96KS9 214 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 LRFN3Q9BTN0 628 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 KCNMB3Q9NPA1 279 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 ORC3Q9UBD5 711 aaPredicted RBP11.63□□□□□ -0.55
BEST3-208ENST00000547208 DDX25Q9UHL0 483 aaKnown RBP11.63□□□□□ -0.55
BEST3-208ENST00000547208 TCEAL9Q9UHQ7 104 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 VAV3Q9UKW4 847 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 CEP131Q9UPN4 1083 aa11.63□□□□□ -0.55
BEST3-208ENST00000547208 MAGEB2O15479 319 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 CLCN3P51790 818 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 NEK4P51957 841 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 CRYBB1P53674 252 aaPredicted RBP11.62□□□□□ -0.55
BEST3-208ENST00000547208 KIZQ2M2Z5 673 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 LETM2Q2VYF4 491 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 PPP4R3AQ6IN85 833 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 EFCAB12Q6NXP0 572 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 NEK8Q86SG6 692 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 FAM228AQ86W67 206 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 NPAS4Q8IUM7 802 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 FIBCD1Q8N539 461 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 METTL13Q8N6R0 699 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 HAS1Q92839 578 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 MRPL38Q96DV4 380 aaKnown RBP11.62□□□□□ -0.55
BEST3-208ENST00000547208 PPP1R16BQ96T49 567 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 OSMRQ99650 979 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 NIFKQ9BYG3 293 aaKnown RBP11.62□□□□□ -0.55
BEST3-208ENST00000547208 ADAMTS10Q9H324 1103 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 GINS2Q9Y248 185 aa11.62□□□□□ -0.55
BEST3-208ENST00000547208 CCDC194A0A1B0GVG4 234 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 TMEM150BA6NC51 233 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 EML1O00423 815 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 JAK2O60674 1132 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 RPS6KA5O75582 802 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 BMPR1AP36894 532 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 NFX1Q12986 1120 aaKnown RBP11.61□□□□□ -0.55
BEST3-208ENST00000547208 NR5A1Q13285 461 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 PPP2R5CQ13362 524 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 DRP2Q13474 957 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 GPM6BQ13491 265 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 DSC3Q14574 896 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 SKIV2LQ15477 1246 aaKnown RBP11.61□□□□□ -0.55
BEST3-208ENST00000547208 C8orf34Q49A92 452 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 FAM43BQ6ZT52 329 aaPredicted RBP11.61□□□□□ -0.55
BEST3-208ENST00000547208 PIK3AP1Q6ZUJ8 805 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 MIER3Q7Z3K6 550 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 CMTR2Q8IYT2 770 aaKnown RBP11.61□□□□□ -0.55
BEST3-208ENST00000547208 LRRC71Q8N4P6 559 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 HLA-CQ95604 372 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 KIF2CQ99661 725 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 NRBP2Q9NSY0 501 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 ST3GAL5Q9UNP4 418 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 COG5Q9UP83 839 aa11.61□□□□□ -0.55
BEST3-208ENST00000547208 FARP1Q9Y4F1 1045 aaPredicted RBP11.61□□□□□ -0.55
BEST3-208ENST00000547208 MRPL42Q9Y6G3 142 aaKnown RBP11.61□□□□□ -0.55
BEST3-208ENST00000547208 MUC6Q6W4X9 2439 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.6□□□□□ -0.55
BEST3-208ENST00000547208 IGKV6-21A0A0C4DH24 114 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 C9IYK1 514 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 CCNT1O60563 726 aaKnown RBP11.6□□□□□ -0.55
BEST3-208ENST00000547208 EIF5BO60841 1220 aaKnown RBP11.6□□□□□ -0.55
BEST3-208ENST00000547208 RB1P06400 928 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 GCFC2P16383 781 aaKnown RBP11.6□□□□□ -0.55
BEST3-208ENST00000547208 XBP1P17861 261 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 CTNNB1P35222 781 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 SARSP49591 514 aaKnown RBP11.6□□□□□ -0.55
BEST3-208ENST00000547208 GATMP50440 423 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 GPC3P51654 580 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 NLRP11P59045 1033 aaKnown RBP11.6□□□□□ -0.55
BEST3-208ENST00000547208 SPIRE1Q08AE8 756 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 BTG3Q14201 252 aaPredicted RBP11.6□□□□□ -0.55
BEST3-208ENST00000547208 COL19A1Q14993 1142 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 XKR3Q5GH77 459 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 ANO5Q75V66 913 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 BANK1Q8NDB2 785 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 WASF1Q92558 559 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 FAM20AQ96MK3 541 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 ADAM2Q99965 735 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 SH2D3AQ9BRG2 576 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 RGS18Q9NS28 235 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 WRAP73Q9P2S5 460 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms