RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CEP89Q96ST8 783 aa15.94■□□□□ 0.14
HOXC11-202ENST00000546378 FLT1P17948 1338 aa15.94■□□□□ 0.14
HOXC11-202ENST00000546378 ZNF844Q08AG5 666 aa15.94■□□□□ 0.14
HOXC11-202ENST00000546378 EPC2Q52LR7 807 aa15.94■□□□□ 0.14
HOXC11-202ENST00000546378 ELOA2Q8IYF1 753 aaPredicted RBP15.94■□□□□ 0.14
HOXC11-202ENST00000546378 EPS8L3Q8TE67 593 aaKnown RBP15.94■□□□□ 0.14
HOXC11-202ENST00000546378 AJAP1Q9UKB5 411 aaPredicted RBP15.94■□□□□ 0.14
HOXC11-202ENST00000546378 EVI5O60447 810 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 NMT1P30419 496 aaKnown RBP15.93■□□□□ 0.14
HOXC11-202ENST00000546378 HGSNATQ68CP4 663 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 CCDC105Q8IYK2 499 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 MYCT1Q8N699 235 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 PSTPIP2Q9H939 334 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.93■□□□□ 0.14
HOXC11-202ENST00000546378 A8MUI8 341 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 PGRMC1O00264 195 aaKnown RBP15.93■□□□□ 0.14
HOXC11-202ENST00000546378 RGS16O15492 202 aaPredicted RBP15.93■□□□□ 0.14
HOXC11-202ENST00000546378 EZRP15311 586 aaKnown RBP15.93■□□□□ 0.14
HOXC11-202ENST00000546378 CHN1P15882 459 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 CENPPQ6IPU0 288 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 CCDC65Q8IXS2 484 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 PIK3R5Q8WYR1 880 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 SH3GL2Q99962 352 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 OSBPL7Q9BZF2 842 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 TAS2R14Q9NYV8 317 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 SBF2Q86WG5 1849 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 RPS6KA5O75582 802 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 GDF11O95390 407 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 H2AFZP0C0S5 128 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 GSTO1P78417 241 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 GRM4Q14833 912 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 SLC18A3Q16572 532 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 LONRF1Q17RB8 773 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 H2AFVQ71UI9 128 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 PRUNE1Q86TP1 453 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 C18orf8Q96DM3 657 aa15.93■□□□□ 0.14
HOXC11-202ENST00000546378 TISP43B9A030 160 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 TBCAO75347 108 aaKnown RBP15.92■□□□□ 0.14
HOXC11-202ENST00000546378 NOL4O94818 638 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 MARCKSL1P49006 195 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 UAP1Q16222 522 aaPredicted RBP15.92■□□□□ 0.14
HOXC11-202ENST00000546378 CYB5D1Q6P9G0 228 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 IQCKQ8N0W5 287 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 STAMBPL1Q96FJ0 436 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 PCDHAC2Q9Y5I4 1007 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 AKAP11Q9UKA4 1901 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 CREB1P16220 341 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 CDC37Q16543 378 aaPredicted RBP15.92■□□□□ 0.14
HOXC11-202ENST00000546378 PALB2Q86YC2 1186 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 FMO2Q99518 471 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 GOLGA6L10A0A0M3HER8 536 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 GOLGA8IPA6NC78 632 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 GOLGA8JA6NMD2 632 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 PPIP5K2O43314 1243 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 UCHL3P15374 230 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 SLC29A2Q14542 456 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 CCDC50Q8IVM0 306 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 PARP9Q8IXQ6 854 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 CCDC127Q96BQ5 260 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 C7orf25Q9BPX7 421 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 PLCB1Q9NQ66 1216 aa15.92■□□□□ 0.14
HOXC11-202ENST00000546378 TPX2Q9ULW0 747 aaKnown RBP15.92■□□□□ 0.14
HOXC11-202ENST00000546378 ENO4A6NNW6 628 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 PPP2R2AP63151 447 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 RNASELQ05823 741 aaKnown RBP15.91■□□□□ 0.14
HOXC11-202ENST00000546378 R3HDM1Q15032 1099 aaKnown RBP15.91■□□□□ 0.14
HOXC11-202ENST00000546378 LRRC55Q6ZSA7 311 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 RFX8Q6ZV50 586 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 VPS36Q86VN1 386 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 FBXO25Q8TCJ0 367 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 INTS9Q9NV88 658 aaKnown RBP15.91■□□□□ 0.14
HOXC11-202ENST00000546378 CTNNAL1Q9UBT7 734 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 PPP1R9AQ9ULJ8 1098 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 PCDHA1Q9Y5I3 950 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 GALCP54803 685 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 ITGB3BPQ13352 177 aaPredicted RBP15.91■□□□□ 0.14
HOXC11-202ENST00000546378 NAB2Q15742 525 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 SYCP2LQ5T4T6 812 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 RPAINQ86UA6 219 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 HEMGNQ9BXL5 484 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 CENPFP49454 3210 aa15.91■□□□□ 0.14
HOXC11-202ENST00000546378 RAD17O75943 681 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 FAM107AO95990 144 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 DENND2CQ68D51 928 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 LRRC34Q8IZ02 419 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 LRRC45Q96CN5 670 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 HOOK2Q96ED9 719 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 SEMA4AQ9H3S1 761 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 ERVK-5Q9HDB9 667 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 ANAPC4Q9UJX5 808 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 SPOPO43791 374 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 MED24O75448 989 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 CFBP00751 764 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 CYP4F22Q6NT55 531 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 DGKHQ86XP1 1220 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 ADGRF4Q8IZF3 695 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 CERS5Q8N5B7 392 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 ARFGAP2Q8N6H7 521 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 SCFD1Q8WVM8 642 aa15.9■□□□□ 0.14
HOXC11-202ENST00000546378 C1orf54Q8WWF1 131 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms