RNA–Protein interactions for RNA: ENST00000546272.5

C12orf43-209, Transcript of chromosome 12 open reading frame 43, humanhuman

TSL 2

Gene C12orf43, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-209ENST00000546272 IGBP1P78318 339 aa20.44■□□□□ 0.86
C12orf43-209ENST00000546272 KRT17Q04695 432 aa20.44■□□□□ 0.86
C12orf43-209ENST00000546272 TMEM62Q0P6H9 643 aa20.44■□□□□ 0.86
C12orf43-209ENST00000546272 KRT32Q14532 448 aa20.44■□□□□ 0.86
C12orf43-209ENST00000546272 RARS2Q5T160 578 aaKnown RBP20.44■□□□□ 0.86
C12orf43-209ENST00000546272 STAG2Q8N3U4 1231 aa20.44■□□□□ 0.86
C12orf43-209ENST00000546272 DCLK2Q8N568 766 aa20.44■□□□□ 0.86
C12orf43-209ENST00000546272 C1orf112Q9NSG2 853 aa20.44■□□□□ 0.86
C12orf43-209ENST00000546272 DUSP12Q9UNI6 340 aa20.44■□□□□ 0.86
C12orf43-209ENST00000546272 KDM3AQ9Y4C1 1321 aa20.44■□□□□ 0.86
C12orf43-209ENST00000546272 EPB41L2O43491 1005 aaKnown RBP20.43■□□□□ 0.86
C12orf43-209ENST00000546272 PPM1AP35813 382 aa20.43■□□□□ 0.86
C12orf43-209ENST00000546272 NFX1Q12986 1120 aaKnown RBP20.43■□□□□ 0.86
C12orf43-209ENST00000546272 SMC1AQ14683 1233 aaKnown RBP20.43■□□□□ 0.86
C12orf43-209ENST00000546272 SLC24A5Q71RS6 500 aa20.43■□□□□ 0.86
C12orf43-209ENST00000546272 MRPL43Q8N983 215 aaKnown RBP20.43■□□□□ 0.86
C12orf43-209ENST00000546272 SEPT1Q8WYJ6 367 aa20.43■□□□□ 0.86
C12orf43-209ENST00000546272 GLG1Q92896 1179 aa20.43■□□□□ 0.86
C12orf43-209ENST00000546272 ACSF2Q96CM8 615 aaPredicted RBP20.43■□□□□ 0.86
C12orf43-209ENST00000546272 ZBTB10Q96DT7 871 aa20.43■□□□□ 0.86
C12orf43-209ENST00000546272 LRRC2Q9BYS8 371 aa20.43■□□□□ 0.86
C12orf43-209ENST00000546272 SMARCAD1Q9H4L7 1026 aa20.43■□□□□ 0.86
C12orf43-209ENST00000546272 SNX14Q9Y5W7 946 aa20.43■□□□□ 0.86
C12orf43-209ENST00000546272 DENND4AQ7Z401 1863 aa20.43■□□□□ 0.86
C12orf43-209ENST00000546272 CHD8Q9HCK8 2581 aa20.42■□□□□ 0.86
C12orf43-209ENST00000546272 DENND3A2RUS2 1198 aa20.42■□□□□ 0.86
C12orf43-209ENST00000546272 STK25O00506 426 aa20.42■□□□□ 0.86
C12orf43-209ENST00000546272 MGEA5O60502 916 aa20.42■□□□□ 0.86
C12orf43-209ENST00000546272 TROAPQ12815 778 aa20.42■□□□□ 0.86
C12orf43-209ENST00000546272 GRM4Q14833 912 aa20.42■□□□□ 0.86
C12orf43-209ENST00000546272 TMEM266Q2M3C6 531 aa20.42■□□□□ 0.86
C12orf43-209ENST00000546272 CATIPQ7Z7H3 387 aa20.42■□□□□ 0.86
C12orf43-209ENST00000546272 RIN2Q8WYP3 895 aaPredicted RBP20.42■□□□□ 0.86
C12orf43-209ENST00000546272 ADAM2Q99965 735 aa20.42■□□□□ 0.86
C12orf43-209ENST00000546272 RGS18Q9NS28 235 aa20.42■□□□□ 0.86
C12orf43-209ENST00000546272 DZANK1Q9NVP4 752 aa20.42■□□□□ 0.86
C12orf43-209ENST00000546272 MAD2L2Q9UI95 211 aa20.42■□□□□ 0.86
C12orf43-209ENST00000546272 PALM3A6NDB9 673 aaPredicted RBP20.41■□□□□ 0.86
C12orf43-209ENST00000546272 C2orf71A6NGG8 1288 aa20.41■□□□□ 0.86
C12orf43-209ENST00000546272 C9IYK1 514 aa20.41■□□□□ 0.86
C12orf43-209ENST00000546272 KLRF2D3W0D1 207 aa20.41■□□□□ 0.86
C12orf43-209ENST00000546272 INSRRP14616 1297 aa20.41■□□□□ 0.86
C12orf43-209ENST00000546272 LIFRP42702 1097 aa20.41■□□□□ 0.86
C12orf43-209ENST00000546272 EXOSC10Q01780 885 aaKnown RBP20.41■□□□□ 0.86
C12orf43-209ENST00000546272 KCNT2Q6UVM3 1135 aa20.41■□□□□ 0.86
C12orf43-209ENST00000546272 NFXL1Q6ZNB6 911 aa20.41■□□□□ 0.86
C12orf43-209ENST00000546272 DHX32Q7L7V1 743 aaKnown RBP20.41■□□□□ 0.86
C12orf43-209ENST00000546272 ZNF654Q8IZM8 581 aa20.41■□□□□ 0.86
C12orf43-209ENST00000546272 TMTC2Q8N394 836 aa20.41■□□□□ 0.86
C12orf43-209ENST00000546272 TCEANC2Q96MN5 208 aa20.41■□□□□ 0.86
C12orf43-209ENST00000546272 PCDHA2Q9Y5H9 948 aa20.41■□□□□ 0.86
C12orf43-209ENST00000546272 USP24Q9UPU5 2620 aa20.4■□□□□ 0.86
C12orf43-209ENST00000546272 GSTTP1A0A1W2PQM5 241 aa20.4■□□□□ 0.86
C12orf43-209ENST00000546272 CCDC69A6NI79 296 aa20.4■□□□□ 0.86
C12orf43-209ENST00000546272 CLASP2O75122 1294 aaKnown RBP20.4■□□□□ 0.86
C12orf43-209ENST00000546272 KRT76Q01546 638 aa20.4■□□□□ 0.86
C12orf43-209ENST00000546272 KIAA0319Q5VV43 1072 aa20.4■□□□□ 0.86
C12orf43-209ENST00000546272 XRRA1Q6P2D8 792 aa20.4■□□□□ 0.86
C12orf43-209ENST00000546272 NLRX1Q86UT6 975 aa20.4■□□□□ 0.86
C12orf43-209ENST00000546272 NME8Q8N427 588 aa20.4■□□□□ 0.86
C12orf43-209ENST00000546272 C12orf76Q8N812 135 aaPredicted RBP20.4■□□□□ 0.86
C12orf43-209ENST00000546272 ZNF558Q96NG5 402 aa20.4■□□□□ 0.86
C12orf43-209ENST00000546272 ATP6V0A4Q9HBG4 840 aa20.4■□□□□ 0.86
C12orf43-209ENST00000546272 TMEM161AQ9NX61 479 aa20.4■□□□□ 0.86
C12orf43-209ENST00000546272 HMGB1P09429 215 aaKnown RBP20.39■□□□□ 0.85
C12orf43-209ENST00000546272 FGFR1P11362 822 aa20.39■□□□□ 0.85
C12orf43-209ENST00000546272 RFX1P22670 979 aa20.39■□□□□ 0.85
C12orf43-209ENST00000546272 ODR4Q5SWX8 454 aa20.39■□□□□ 0.85
C12orf43-209ENST00000546272 PCNX4Q63HM2 1172 aa20.39■□□□□ 0.85
C12orf43-209ENST00000546272 OTOP3Q7RTS5 596 aa20.39■□□□□ 0.85
C12orf43-209ENST00000546272 HOMER1Q86YM7 354 aa20.39■□□□□ 0.85
C12orf43-209ENST00000546272 TNPO1Q92973 898 aaKnown RBP20.39■□□□□ 0.85
C12orf43-209ENST00000546272 JAKMIP1Q96N16 626 aaKnown RBP20.39■□□□□ 0.85
C12orf43-209ENST00000546272 MYL10Q9BUA6 226 aa20.39■□□□□ 0.85
C12orf43-209ENST00000546272 KCNK12Q9HB15 430 aa20.39■□□□□ 0.85
C12orf43-209ENST00000546272 SPG21Q9NZD8 308 aa20.39■□□□□ 0.85
C12orf43-209ENST00000546272 WNT16Q9UBV4 365 aa20.39■□□□□ 0.85
C12orf43-209ENST00000546272 GPR179Q6PRD1 2367 aa20.39■□□□□ 0.85
C12orf43-209ENST00000546272 BAZ2BQ9UIF8 2168 aaKnown RBP20.39■□□□□ 0.85
C12orf43-209ENST00000546272 ATRXP46100 2492 aa20.38■□□□□ 0.85
C12orf43-209ENST00000546272 RPS6KA5O75582 802 aa20.38■□□□□ 0.85
C12orf43-209ENST00000546272 DDAH1O94760 285 aa20.38■□□□□ 0.85
C12orf43-209ENST00000546272 SP9P0CG40 484 aa20.38■□□□□ 0.85
C12orf43-209ENST00000546272 CPA1P15085 419 aa20.38■□□□□ 0.85
C12orf43-209ENST00000546272 TBC1D8BQ0IIM8 1120 aa20.38■□□□□ 0.85
C12orf43-209ENST00000546272 BMS1Q14692 1282 aaKnown RBP20.38■□□□□ 0.85
C12orf43-209ENST00000546272 TMEM117Q9H0C3 514 aa20.38■□□□□ 0.85
C12orf43-209ENST00000546272 ELAC1Q9H777 363 aaKnown RBP20.38■□□□□ 0.85
C12orf43-209ENST00000546272 SMIM35A0A1B0GVV1 85 aa20.37■□□□□ 0.85
C12orf43-209ENST00000546272 ATXN1P54253 815 aaKnown RBP20.37■□□□□ 0.85
C12orf43-209ENST00000546272 SLC35G1Q2M3R5 365 aa20.37■□□□□ 0.85
C12orf43-209ENST00000546272 KANK3Q6NY19 840 aa20.37■□□□□ 0.85
C12orf43-209ENST00000546272 LRRC55Q6ZSA7 311 aa20.37■□□□□ 0.85
C12orf43-209ENST00000546272 SGMS1Q86VZ5 419 aa20.37■□□□□ 0.85
C12orf43-209ENST00000546272 GPR161Q8N6U8 529 aaKnown RBP20.37■□□□□ 0.85
C12orf43-209ENST00000546272 SUMF1Q8NBK3 374 aa20.37■□□□□ 0.85
C12orf43-209ENST00000546272 MAP3K14Q99558 947 aa20.37■□□□□ 0.85
C12orf43-209ENST00000546272 IGSF9Q9P2J2 1179 aa20.37■□□□□ 0.85
C12orf43-209ENST00000546272 NOC2LQ9Y3T9 749 aaKnown RBP20.37■□□□□ 0.85
C12orf43-209ENST00000546272 CACNA1IQ9P0X4 2223 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms