RNA–Protein interactions for RNA: ENST00000546033.1

PTP4A1P2-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 2, humanhuman

BASIC

Gene PTP4A1P2, Length 454 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P2-201ENST00000546033 GTPBP6O43824 516 aaPredicted RBP17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 TRAPPC10P48553 1259 aa17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 NLRP11P59045 1033 aaKnown RBP17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 HTRA4P83105 476 aaPredicted RBP17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 TARBP2Q15633 366 aaKnown RBP17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 C4orf19Q8IY42 314 aa17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 NEK9Q8TD19 979 aa17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 TGS1Q96RS0 853 aaKnown RBP17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 PPP1R16BQ96T49 567 aa17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 OSMRQ99650 979 aa17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 LXNQ9BS40 222 aa17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 BACH2Q9BYV9 841 aa17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 ZSWIM4Q9H7M6 989 aa17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 CERS4Q9HA82 394 aa17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 COL6A3P12111 3177 aa17.2■□□□□ 0.34
PTP4A1P2-201ENST00000546033 LCHNA4D1U4 455 aa17.19■□□□□ 0.34
PTP4A1P2-201ENST00000546033 H3BQV1 296 aa17.19■□□□□ 0.34
PTP4A1P2-201ENST00000546033 STAG3L1P0CL83 205 aa17.19■□□□□ 0.34
PTP4A1P2-201ENST00000546033 TPH2Q8IWU9 490 aa17.19■□□□□ 0.34
PTP4A1P2-201ENST00000546033 LINC01465Q8N7H1 131 aa17.19■□□□□ 0.34
PTP4A1P2-201ENST00000546033 SLC7A3Q8WY07 619 aa17.19■□□□□ 0.34
PTP4A1P2-201ENST00000546033 DYDC2Q96IM9 177 aa17.19■□□□□ 0.34
PTP4A1P2-201ENST00000546033 CCDC43Q96MW1 224 aaKnown RBP17.19■□□□□ 0.34
PTP4A1P2-201ENST00000546033 CYP26B1Q9NR63 512 aa17.19■□□□□ 0.34
PTP4A1P2-201ENST00000546033 SMC3Q9UQE7 1217 aa17.19■□□□□ 0.34
PTP4A1P2-201ENST00000546033 DENND3A2RUS2 1198 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 LINC01553A4QN01 128 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 GPR32O75388 356 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 CD2BP2O95400 341 aaKnown RBP17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 YWHABP31946 246 aaKnown RBP17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 POLGP54098 1239 aaPredicted RBP17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 CYP4A11Q02928 519 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 SPIRE1Q08AE8 756 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 TMEM266Q2M3C6 531 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 TTC38Q5R3I4 469 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 MCTP1Q6DN14 999 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 ANO5Q75V66 913 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 NLRP7Q8WX94 980 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 CEP170P1Q96L14 293 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 SAMD11Q96NU1 681 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 MTMR9Q96QG7 549 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 EIF2AK1Q9BQI3 630 aaKnown RBP17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 TSPYL2Q9H2G4 693 aaPredicted RBP17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 CDHR5Q9HBB8 845 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 ERVK-5Q9HDB9 667 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 RGL1Q9NZL6 768 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 LRFN2Q9ULH4 789 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 ST3GAL5Q9UNP4 418 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 NOC2LQ9Y3T9 749 aaKnown RBP17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 GTF3C3Q9Y5Q9 886 aa17.18■□□□□ 0.34
PTP4A1P2-201ENST00000546033 TMEM150BA6NC51 233 aa17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 MAFO75444 373 aaPredicted RBP17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 STBD1O95210 358 aa17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 OR52Z1P0C646 297 aa17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 U2AF2P26368 475 aaKnown RBP eCLIP17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 GJB2P29033 226 aa17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 GPC3P51654 580 aa17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 ERVK-21P61565 698 aa17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 CTTNQ14247 550 aaKnown RBP17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 ZNF174Q15697 407 aa17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 PLA2G4FQ68DD2 849 aa17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 FIBCD1Q8N539 461 aa17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 ERMNQ8TAM6 284 aa17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 SH2D3AQ9BRG2 576 aa17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 C1orf112Q9NSG2 853 aa17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 CHD9Q3L8U1 2897 aa17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 CDH23Q9H251 3354 aa17.17■□□□□ 0.34
PTP4A1P2-201ENST00000546033 IGKV6-21A0A0C4DH24 114 aa17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 WNT7AO00755 349 aa17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 GAS2O43903 313 aaKnown RBP17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 ARHGEF15O94989 841 aa17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 ZSCAN20P17040 1043 aaPredicted RBP17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 EIF4BP23588 611 aaKnown RBP17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 RFC5P40937 340 aa17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 ADGRE1Q14246 886 aa17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 XKR9Q5GH70 373 aa17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 NPAS4Q8IUM7 802 aa17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 SP7Q8TDD2 431 aaPredicted RBP17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 TMEM40Q8WWA1 233 aa17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 GCOM2Q9BZD3 368 aaPredicted RBP17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 INO80BQ9C086 356 aaPredicted RBP17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 TMEM60Q9H2L4 133 aa17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 ADAMTS10Q9H324 1103 aa17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 SUCLA2Q9P2R7 463 aaPredicted RBP17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 MTUS1Q9ULD2 1270 aa17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 NLRC5Q86WI3 1866 aa17.16■□□□□ 0.34
PTP4A1P2-201ENST00000546033 RBAK-RBAKDNI3L0D1 243 aa17.15■□□□□ 0.34
PTP4A1P2-201ENST00000546033 SLITRK3O94933 977 aa17.15■□□□□ 0.34
PTP4A1P2-201ENST00000546033 SARSP49591 514 aaKnown RBP17.15■□□□□ 0.34
PTP4A1P2-201ENST00000546033 NPEPPSP55786 919 aa17.15■□□□□ 0.34
PTP4A1P2-201ENST00000546033 SLC24A5Q71RS6 500 aa17.15■□□□□ 0.34
PTP4A1P2-201ENST00000546033 ZNF410Q86VK4 478 aa17.15■□□□□ 0.34
PTP4A1P2-201ENST00000546033 FAM228AQ86W67 206 aa17.15■□□□□ 0.34
PTP4A1P2-201ENST00000546033 RHPN2Q8IUC4 686 aa17.15■□□□□ 0.34
PTP4A1P2-201ENST00000546033 FBXO22Q8NEZ5 403 aa17.15■□□□□ 0.34
PTP4A1P2-201ENST00000546033 TCP11Q8WWU5 503 aa17.15■□□□□ 0.34
PTP4A1P2-201ENST00000546033 LINC01599Q8WXQ3 324 aa17.15■□□□□ 0.34
PTP4A1P2-201ENST00000546033 PPM1EQ8WY54 764 aa17.15■□□□□ 0.34
PTP4A1P2-201ENST00000546033 CEP89Q96ST8 783 aa17.15■□□□□ 0.34
PTP4A1P2-201ENST00000546033 ADAM2Q99965 735 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms