RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 SMCO2A6NFE2 343 aa18.97■□□□□ 0.63
CPSF7-225ENST00000545934 SPOUT1Q5T280 376 aaKnown RBP18.97■□□□□ 0.63
CPSF7-225ENST00000545934 MICAL1Q8TDZ2 1067 aa18.97■□□□□ 0.63
CPSF7-225ENST00000545934 RPGRIP1Q96KN7 1286 aa18.97■□□□□ 0.63
CPSF7-225ENST00000545934 RNF19AQ9NV58 838 aa18.97■□□□□ 0.63
CPSF7-225ENST00000545934 BRPF3Q9ULD4 1205 aa18.97■□□□□ 0.63
CPSF7-225ENST00000545934 GINS2Q9Y248 185 aa18.97■□□□□ 0.63
CPSF7-225ENST00000545934 MAFBQ9Y5Q3 323 aaPredicted RBP18.97■□□□□ 0.63
CPSF7-225ENST00000545934 DDX39AO00148 427 aaKnown RBP18.96■□□□□ 0.63
CPSF7-225ENST00000545934 BACH1O14867 736 aa18.96■□□□□ 0.63
CPSF7-225ENST00000545934 GPR32O75388 356 aa18.96■□□□□ 0.63
CPSF7-225ENST00000545934 CYP3A4P08684 503 aa18.96■□□□□ 0.63
CPSF7-225ENST00000545934 FGFR1P11362 822 aa18.96■□□□□ 0.63
CPSF7-225ENST00000545934 LAG3P18627 525 aa18.96■□□□□ 0.63
CPSF7-225ENST00000545934 EXOSC10Q01780 885 aaKnown RBP18.96■□□□□ 0.63
CPSF7-225ENST00000545934 PDXDC2PQ6P474 469 aa18.96■□□□□ 0.63
CPSF7-225ENST00000545934 SYCE2Q6PIF2 218 aa18.96■□□□□ 0.63
CPSF7-225ENST00000545934 LRRC55Q6ZSA7 311 aa18.96■□□□□ 0.63
CPSF7-225ENST00000545934 SUGP1Q8IWZ8 645 aaKnown RBP18.96■□□□□ 0.63
CPSF7-225ENST00000545934 THNSL1Q8IYQ7 743 aa18.96■□□□□ 0.63
CPSF7-225ENST00000545934 MRPS27Q92552 414 aaKnown RBP18.96■□□□□ 0.63
CPSF7-225ENST00000545934 OSMRQ99650 979 aa18.96■□□□□ 0.63
CPSF7-225ENST00000545934 GLT8D2Q9H1C3 349 aa18.96■□□□□ 0.63
CPSF7-225ENST00000545934 ATP6V0A4Q9HBG4 840 aa18.96■□□□□ 0.63
CPSF7-225ENST00000545934 FAM217BQ9NTX9 383 aaPredicted RBP18.96■□□□□ 0.63
CPSF7-225ENST00000545934 V9GY48 417 aaPredicted RBP18.96■□□□□ 0.63
CPSF7-225ENST00000545934 IBSPP21815 317 aaPredicted RBP18.95■□□□□ 0.62
CPSF7-225ENST00000545934 RTN1Q16799 776 aa18.95■□□□□ 0.62
CPSF7-225ENST00000545934 PTPN21Q16825 1174 aa18.95■□□□□ 0.62
CPSF7-225ENST00000545934 KIZQ2M2Z5 673 aa18.95■□□□□ 0.62
CPSF7-225ENST00000545934 SWSAP1Q6NVH7 229 aa18.95■□□□□ 0.62
CPSF7-225ENST00000545934 ANKRD54Q6NXT1 300 aa18.95■□□□□ 0.62
CPSF7-225ENST00000545934 MIS18BP1Q6P0N0 1132 aa18.95■□□□□ 0.62
CPSF7-225ENST00000545934 SYNE3Q6ZMZ3 975 aa18.95■□□□□ 0.62
CPSF7-225ENST00000545934 PLA2G4DQ86XP0 818 aa18.95■□□□□ 0.62
CPSF7-225ENST00000545934 LINC01465Q8N7H1 131 aa18.95■□□□□ 0.62
CPSF7-225ENST00000545934 BBXQ8WY36 941 aaPredicted RBP18.95■□□□□ 0.62
CPSF7-225ENST00000545934 ZDBF2Q9HCK1 2354 aa18.95■□□□□ 0.62
CPSF7-225ENST00000545934 IPO5O00410 1097 aaKnown RBP18.94■□□□□ 0.62
CPSF7-225ENST00000545934 ZNF76P36508 570 aa18.94■□□□□ 0.62
CPSF7-225ENST00000545934 APOBRQ0VD83 1088 aa18.94■□□□□ 0.62
CPSF7-225ENST00000545934 ZNF746Q6NUN9 644 aaPredicted RBP18.94■□□□□ 0.62
CPSF7-225ENST00000545934 YTHDC1Q96MU7 727 aaKnown RBP18.94■□□□□ 0.62
CPSF7-225ENST00000545934 CASD1Q96PB1 797 aa18.94■□□□□ 0.62
CPSF7-225ENST00000545934 TMEM117Q9H0C3 514 aa18.94■□□□□ 0.62
CPSF7-225ENST00000545934 MYO15AQ9UKN7 3530 aa18.94■□□□□ 0.62
CPSF7-225ENST00000545934 HIDE1A8MVS5 230 aa18.93■□□□□ 0.62
CPSF7-225ENST00000545934 ADAMTS3O15072 1205 aa18.93■□□□□ 0.62
CPSF7-225ENST00000545934 ZBTB43O43298 467 aa18.93■□□□□ 0.62
CPSF7-225ENST00000545934 VTNP04004 478 aa18.93■□□□□ 0.62
CPSF7-225ENST00000545934 SRGAP2BP0DMP2 458 aa18.93■□□□□ 0.62
CPSF7-225ENST00000545934 VCPP55072 806 aaKnown RBP18.93■□□□□ 0.62
CPSF7-225ENST00000545934 PLPP4Q5VZY2 271 aa18.93■□□□□ 0.62
CPSF7-225ENST00000545934 SMAP1Q8IYB5 467 aaPredicted RBP18.93■□□□□ 0.62
CPSF7-225ENST00000545934 PPP1R16BQ96T49 567 aa18.93■□□□□ 0.62
CPSF7-225ENST00000545934 TBC1D22BQ9NU19 505 aa18.93■□□□□ 0.62
CPSF7-225ENST00000545934 CDC27P30260 824 aa18.92■□□□□ 0.62
CPSF7-225ENST00000545934 TECP42680 631 aa18.92■□□□□ 0.62
CPSF7-225ENST00000545934 RCAN1P53805 252 aa18.92■□□□□ 0.62
CPSF7-225ENST00000545934 TSGA10IPQ3SY00 556 aa18.92■□□□□ 0.62
CPSF7-225ENST00000545934 JAKMIP3Q5VZ66 844 aa18.92■□□□□ 0.62
CPSF7-225ENST00000545934 KCNT2Q6UVM3 1135 aa18.92■□□□□ 0.62
CPSF7-225ENST00000545934 TCEANC2Q96MN5 208 aa18.92■□□□□ 0.62
CPSF7-225ENST00000545934 TCF25Q9BQ70 676 aa18.92■□□□□ 0.62
CPSF7-225ENST00000545934 ADAMTS10Q9H324 1103 aa18.92■□□□□ 0.62
CPSF7-225ENST00000545934 NGRNQ9NPE2 291 aaKnown RBP18.92■□□□□ 0.62
CPSF7-225ENST00000545934 ANO2Q9NQ90 1003 aa18.92■□□□□ 0.62
CPSF7-225ENST00000545934 C2orf16Q68DN1 1984 aa18.92■□□□□ 0.62
CPSF7-225ENST00000545934 ESYT2A0FGR8 921 aa18.91■□□□□ 0.62
CPSF7-225ENST00000545934 HOXA2O43364 376 aa18.91■□□□□ 0.62
CPSF7-225ENST00000545934 HOXB8P17481 243 aaPredicted RBP18.91■□□□□ 0.62
CPSF7-225ENST00000545934 SETQ01105 290 aaPredicted RBP18.91■□□□□ 0.62
CPSF7-225ENST00000545934 PFKFB3Q16875 520 aaPredicted RBP18.91■□□□□ 0.62
CPSF7-225ENST00000545934 DHX32Q7L7V1 743 aaKnown RBP18.91■□□□□ 0.62
CPSF7-225ENST00000545934 LRRC43Q8N309 656 aa18.91■□□□□ 0.62
CPSF7-225ENST00000545934 ZNF577Q9BSK1 485 aa18.91■□□□□ 0.62
CPSF7-225ENST00000545934 ZMYND12Q9H0C1 365 aa18.91■□□□□ 0.62
CPSF7-225ENST00000545934 PUF60Q9UHX1 559 aaKnown RBP18.91■□□□□ 0.62
CPSF7-225ENST00000545934 CEP131Q9UPN4 1083 aa18.91■□□□□ 0.62
CPSF7-225ENST00000545934 MAGEB2O15479 319 aa18.9■□□□□ 0.62
CPSF7-225ENST00000545934 AVPR2P30518 371 aa18.9■□□□□ 0.62
CPSF7-225ENST00000545934 PPM1AP35813 382 aa18.9■□□□□ 0.62
CPSF7-225ENST00000545934 CLCN3P51790 818 aa18.9■□□□□ 0.62
CPSF7-225ENST00000545934 CLLU1OSQ5K130 101 aa18.9■□□□□ 0.62
CPSF7-225ENST00000545934 ZNF598Q86UK7 904 aaKnown RBP18.9■□□□□ 0.62
CPSF7-225ENST00000545934 ECHDC2Q86YB7 292 aa18.9■□□□□ 0.62
CPSF7-225ENST00000545934 CKAP2LQ8IYA6 745 aa18.9■□□□□ 0.62
CPSF7-225ENST00000545934 ZNF710Q8N1W2 664 aa18.9■□□□□ 0.62
CPSF7-225ENST00000545934 METTL13Q8N6R0 699 aa18.9■□□□□ 0.62
CPSF7-225ENST00000545934 LENG9Q96B70 501 aa18.9■□□□□ 0.62
CPSF7-225ENST00000545934 ZNF558Q96NG5 402 aa18.9■□□□□ 0.62
CPSF7-225ENST00000545934 ENTPD7Q9NQZ7 604 aa18.9■□□□□ 0.62
CPSF7-225ENST00000545934 PCDHA10Q9Y5I2 948 aa18.9■□□□□ 0.62
CPSF7-225ENST00000545934 DMDP11532 3685 aa18.9■□□□□ 0.62
CPSF7-225ENST00000545934 GOLGA8AA7E2F4 631 aa18.89■□□□□ 0.61
CPSF7-225ENST00000545934 GOLGA8BA8MQT2 603 aa18.89■□□□□ 0.61
CPSF7-225ENST00000545934 ST18O60284 1047 aa18.89■□□□□ 0.61
CPSF7-225ENST00000545934 PSAPP07602 524 aa18.89■□□□□ 0.61
CPSF7-225ENST00000545934 EIF4BP23588 611 aaKnown RBP18.89■□□□□ 0.61
CPSF7-225ENST00000545934 PBX3P40426 434 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms