RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 ALDH16A1Q8IZ83 802 aa8.8□□□□□ -1
SNHG1-223ENST00000545440 PGBD3Q8N328 593 aa8.8□□□□□ -1
SNHG1-223ENST00000545440 DEFB123Q8N688 67 aa8.8□□□□□ -1
SNHG1-223ENST00000545440 KAT2BQ92831 832 aa8.8□□□□□ -1
SNHG1-223ENST00000545440 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.8□□□□□ -11e-17■■■□□ 16.6
SNHG1-223ENST00000545440 MTIF3Q9H2K0 278 aaKnown RBP8.8□□□□□ -1
SNHG1-223ENST00000545440 PSTPIP2Q9H939 334 aa8.8□□□□□ -1
SNHG1-223ENST00000545440 IL23AQ9NPF7 189 aa8.8□□□□□ -1
SNHG1-223ENST00000545440 TIMMDC1Q9NPL8 285 aa8.8□□□□□ -1
SNHG1-223ENST00000545440 FAM13BQ9NYF5 915 aa8.8□□□□□ -1
SNHG1-223ENST00000545440 ZDHHC3Q9NYG2 299 aa8.8□□□□□ -1
SNHG1-223ENST00000545440 STIM2Q9P246 746 aa8.8□□□□□ -1
SNHG1-223ENST00000545440 GPC6Q9Y625 555 aaPredicted RBP8.8□□□□□ -1
SNHG1-223ENST00000545440 RALGAPA2Q2PPJ7 1873 aa8.8□□□□□ -1
SNHG1-223ENST00000545440 UMODL1Q5DID0 1318 aa8.8□□□□□ -1
SNHG1-223ENST00000545440 COL6A3P12111 3177 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 hCG_1642624A0A1W2PR95 340 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 SPDYE3A6NKU9 549 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 HAS3O00219 553 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 EML1O00423 815 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 PPFIA4O75335 1185 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 CENPBP07199 599 aaPredicted RBP8.79□□□□□ -1
SNHG1-223ENST00000545440 ZNF286BP0CG31 522 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 PCSK2P16519 638 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 RPS6KB1P23443 525 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 RFC2P35250 354 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 METAP2P50579 478 aaKnown RBP eCLIP8.79□□□□□ -1
SNHG1-223ENST00000545440 MARSP56192 900 aaKnown RBP8.79□□□□□ -1
SNHG1-223ENST00000545440 SP2Q02086 613 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 RBL2Q08999 1139 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 POU4F2Q12837 409 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 NEDD9Q14511 834 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 C11orf91Q3C1V1 193 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 HSDL1Q3SXM5 330 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 C4orf17Q53FE4 359 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 TMEM240Q5SV17 173 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 WWC2Q6AWC2 1192 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 METTL7BQ6UX53 244 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 Q6ZUG5 572 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 C16orf59Q7L2K0 433 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 CRIPAKQ8N1N5 446 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 CCDC155Q8N6L0 562 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 CAGE1Q8TC20 777 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 RNF217Q8TC41 542 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 GPRASP2Q96D09 838 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 CDHR1Q96JP9 859 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 SPATA33Q96N06 139 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 SENP7Q9BQF6 1050 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 PHACTR1Q9C0D0 580 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 EHMT1Q9H9B1 1298 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 MTMR10Q9NXD2 777 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 GTF2IRD1Q9UHL9 959 aa8.79□□□□□ -1
SNHG1-223ENST00000545440 A0A1B0GTH6 734 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 STXBP3O00186 592 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 NOP56O00567 594 aaKnown RBP8.78□□□□□ -1
SNHG1-223ENST00000545440 CYP2C9P11712 490 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 BMP1P13497 986 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 CPA1P15085 419 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 CDC27P30260 824 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 SCNN1AP37088 669 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 NAPAP54920 295 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 EVCP57679 992 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 APOBRQ0VD83 1088 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 AP3B2Q13367 1082 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 BFSP2Q13515 415 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 PTGISQ16647 500 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 UBE2SQ16763 222 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 KIAA0753Q2KHM9 967 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 ARSJQ5FYB0 599 aaPredicted RBP8.78□□□□□ -1
SNHG1-223ENST00000545440 FOXD4L5Q5VV16 416 aaPredicted RBP8.78□□□□□ -1
SNHG1-223ENST00000545440 ZNF365Q70YC5 407 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 Q7L0L9 218 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 NLRX1Q86UT6 975 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 RPUSD2Q8IZ73 545 aaKnown RBP8.78□□□□□ -1
SNHG1-223ENST00000545440 C7orf31Q8N865 590 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 GIMAP8Q8ND71 665 aaPredicted RBP8.78□□□□□ -1
SNHG1-223ENST00000545440 AFAP1L1Q8TED9 768 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 HERVK_113Q902F9 699 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 BRF1Q92994 677 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 MYO19Q96H55 970 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 CTAGE1Q96RT6 745 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 GLT8D2Q9H1C3 349 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 MLXIPQ9HAP2 919 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 RIC8AQ9NPQ8 531 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 BARHL2Q9NY43 387 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 STXBP5LQ9Y2K9 1186 aa8.78□□□□□ -1
SNHG1-223ENST00000545440 DNMT3AQ9Y6K1 912 aaPredicted RBP8.78□□□□□ -1
SNHG1-223ENST00000545440 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-223ENST00000545440 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-223ENST00000545440 ESYT2A0FGR8 921 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 FIGNL2A6NMB9 653 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 NDUFB5O43674 189 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 PARNO95453 639 aaKnown RBP8.77□□□□□ -1.01
SNHG1-223ENST00000545440 FOSP01100 380 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-223ENST00000545440 LGALS2P05162 132 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 ACRP10323 421 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 ITGB5P18084 799 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 HOXC8P31273 242 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 ADCY7P51828 1080 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 CCL23P55773 120 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms