RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 PF4V1P10720 104 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 GNAT1P11488 350 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 CCND1P24385 295 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 SCAND1P57086 179 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 PHC1P78364 1004 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 DLX2Q07687 328 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-222ENST00000545308 TMEM240Q5SV17 173 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 CXorf57Q6NSI4 855 aaKnown RBP5.33□□□□□ -1.56
SNHG1-222ENST00000545308 PGM2L1Q6PCE3 622 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 OTOP3Q7RTS5 596 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 RASSF3Q86WH2 238 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 KIAA1958Q8N8K9 716 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 PLEKHO2Q8TD55 490 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 MORC4Q8TE76 937 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 RPS6KC1Q96S38 1066 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 MYH16Q9H6N6 1097 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 ZMAT4Q9H898 229 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 OBP2AQ9NY56 170 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 MARCH2Q9P0N8 246 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 FBLN5Q9UBX5 448 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 DBR1Q9UK59 544 aaKnown RBP5.33□□□□□ -1.56
SNHG1-222ENST00000545308 ZBTB21Q9ULJ3 1066 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 X6R8D5 127 aa5.33□□□□□ -1.56
SNHG1-222ENST00000545308 RSF1Q96T23 1441 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-222ENST00000545308 WASHC2AQ641Q2 1341 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 GOLGA6CA6NDK9 693 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 GOLGA6BA6NDN3 693 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 VSTM5A8MXK1 200 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 C22orf46C9J442 243 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 MYL1P05976 194 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 GOLGA6DP0CG33 693 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 INSRRP14616 1297 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 MC3RP41968 323 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 RECQLP46063 649 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-222ENST00000545308 GPR3P46089 330 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 KRT85P78386 507 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 BIRC2Q13490 618 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 HLTFQ14527 1009 aaKnown RBP eCLIP5.32□□□□□ -1.56
SNHG1-222ENST00000545308 PDCD1Q15116 288 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 SEC23AQ15436 765 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 GFOD2Q3B7J2 385 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 SYCP2LQ5T4T6 812 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 B3GNT8Q7Z7M8 397 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 CMTR2Q8IYT2 770 aaKnown RBP5.32□□□□□ -1.56
SNHG1-222ENST00000545308 PIP4K2CQ8TBX8 421 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 LMBR1Q8WVP7 490 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 ALG3Q92685 438 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 TRMT2BQ96GJ1 504 aaKnown RBP5.32□□□□□ -1.56
SNHG1-222ENST00000545308 SCYL1Q96KG9 808 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 MTA3Q9BTC8 594 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 TMPRSS5Q9H3S3 457 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 ANLNQ9NQW6 1124 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 TOMM22Q9NS69 142 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 GOLGA6AQ9NYA3 693 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 SRPK3Q9UPE1 567 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 MYRFQ9Y2G1 1151 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 ANKRD6Q9Y2G4 727 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 GIT1Q9Y2X7 761 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 IFT140Q96RY7 1462 aa5.32□□□□□ -1.56
SNHG1-222ENST00000545308 TRIM75PA6NK02 468 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 SCDO00767 359 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 NOBOXO60393 691 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 CFBP00751 764 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 FUCA1P04066 466 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 CT47B1P0C2W7 299 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-222ENST00000545308 PTX3P26022 381 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-222ENST00000545308 LSP1P33241 339 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 KIF11P52732 1056 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 SPIRE1Q08AE8 756 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 ZNF174Q15697 407 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 GORABQ5T7V8 394 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 GPR158Q5T848 1215 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 CPZQ66K79 652 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 ESRP1Q6NXG1 681 aaKnown RBP5.31□□□□□ -1.56
SNHG1-222ENST00000545308 SLC4A10Q6U841 1118 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 KSR2Q6VAB6 950 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 EPM2AIP1Q7L775 607 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-222ENST00000545308 PNMA8AQ86V59 439 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-222ENST00000545308 DGKHQ86XP1 1220 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 CARFQ8N187 725 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 ZNF610Q8N9Z0 462 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 DLG3Q92796 817 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 TSPAN17Q96FV3 270 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 ZDHHC5Q9C0B5 715 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 EPB41L1Q9H4G0 881 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 PNMA8BQ9ULN7 279 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-222ENST00000545308 NOC2LQ9Y3T9 749 aaKnown RBP5.31□□□□□ -1.56
SNHG1-222ENST00000545308 RWDD3Q9Y3V2 267 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 B3GALT1Q9Y5Z6 326 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 CFTRP13569 1480 aa5.31□□□□□ -1.56
SNHG1-222ENST00000545308 GOLGA8AA7E2F4 631 aa5.3□□□□□ -1.56
SNHG1-222ENST00000545308 GOLGA8BA8MQT2 603 aa5.3□□□□□ -1.56
SNHG1-222ENST00000545308 PLIN1O60240 522 aa5.3□□□□□ -1.56
SNHG1-222ENST00000545308 ZRANB2O95218 330 aaKnown RBP eCLIP5.3□□□□□ -1.563e-9■■■■■ 27.5
SNHG1-222ENST00000545308 LTFP02788 710 aa5.3□□□□□ -1.56
SNHG1-222ENST00000545308 LPOP22079 712 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-222ENST00000545308 RGL3Q3MIN7 710 aa5.3□□□□□ -1.56
SNHG1-222ENST00000545308 USP33Q8TEY7 942 aa5.3□□□□□ -1.56
SNHG1-222ENST00000545308 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.3□□□□□ -1.56
SNHG1-222ENST00000545308 TIFAQ96CG3 184 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms