RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 IER5Q5VY09 327 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 PLA2G4FQ68DD2 849 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 EFCAB12Q6NXP0 572 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 TRMT1LQ7Z2T5 733 aaKnown RBP13.08□□□□□ -0.32
SNHG1-221ENST00000544983 METTL13Q8N6R0 699 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 SYT2Q8N9I0 419 aaPredicted RBP13.08□□□□□ -0.32
SNHG1-221ENST00000544983 LARP4BQ92615 738 aaKnown RBP13.08□□□□□ -0.32
SNHG1-221ENST00000544983 DPF3Q92784 378 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 CCDC34Q96HJ3 373 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 PNMA5Q96PV4 448 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 CTAGE1Q96RT6 745 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 BHMT2Q9H2M3 363 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 ATP6V0A4Q9HBG4 840 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 KCNG1Q9UIX4 513 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 KCNH3Q9ULD8 1083 aa13.08□□□□□ -0.32
SNHG1-221ENST00000544983 TRIP12Q14669 1992 aaPredicted RBP13.08□□□□□ -0.32
SNHG1-221ENST00000544983 MKI67P46013 3256 aaKnown RBP13.07□□□□□ -0.32
SNHG1-221ENST00000544983 GOLGA6L22H0YM25 854 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 M0QZ92 97 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 ZBTB39O15060 712 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 ASAP2O43150 1006 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 PLA2G4BP0C869 781 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 CYP11B2P19099 503 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 STAT6P42226 847 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 ZNF200P98182 395 aaPredicted RBP13.07□□□□□ -0.32
SNHG1-221ENST00000544983 AMPD3Q01432 767 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 HIC1Q14526 733 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 MXD4Q14582 209 aaPredicted RBP13.07□□□□□ -0.32
SNHG1-221ENST00000544983 USP49Q70CQ1 688 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 KIAA0319LQ8IZA0 1049 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 LINC01465Q8N7H1 131 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 TRAPPC12Q8WVT3 735 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 MRPS27Q92552 414 aaKnown RBP13.07□□□□□ -0.32
SNHG1-221ENST00000544983 RAD54LQ92698 747 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 MTRQ99707 1265 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 NOC4LQ9BVI4 516 aaKnown RBP13.07□□□□□ -0.32
SNHG1-221ENST00000544983 HIPK3Q9H422 1215 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 PDLIM7Q9NR12 457 aa13.07□□□□□ -0.32
SNHG1-221ENST00000544983 CEP290O15078 2479 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 E9PMD0 336 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 TIMP1P01033 207 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 RAG1P15918 1043 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 SELPP16109 830 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 GUCY2CP25092 1073 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 RFC2P35250 354 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 SLC12A3P55017 1021 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 POU5F1BQ06416 359 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 EMC2Q15006 297 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 TRIM71Q2Q1W2 868 aaKnown RBP13.06□□□□□ -0.32
SNHG1-221ENST00000544983 FAM26DQ5JW98 314 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 SV2BQ7L1I2 683 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 PSPC1Q8WXF1 523 aaKnown RBP13.06□□□□□ -0.32
SNHG1-221ENST00000544983 KIFAP3Q92845 792 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 CHAMP1Q96JM3 812 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 TNMDQ9H2S6 317 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 SUGCTQ9HAC7 445 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 C17orf75Q9HAS0 396 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 GDPD2Q9HCC8 539 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 BMP2KQ9NSY1 1161 aaPredicted RBP13.06□□□□□ -0.32
SNHG1-221ENST00000544983 BLOC1S4Q9NUP1 217 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 HPSEQ9Y251 543 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 SQORQ9Y6N5 450 aa13.06□□□□□ -0.32
SNHG1-221ENST00000544983 TMEM150BA6NC51 233 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 POLR2DO15514 142 aaKnown RBP13.05□□□□□ -0.32
SNHG1-221ENST00000544983 USO1O60763 962 aaKnown RBP13.05□□□□□ -0.32
SNHG1-221ENST00000544983 CKBP12277 381 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 SCP2P22307 547 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 THPOP40225 353 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 SYKP43405 635 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 FXR1P51114 621 aaKnown RBP eCLIP13.05□□□□□ -0.32
SNHG1-221ENST00000544983 UBE2HP62256 183 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 PPP2R5AQ15172 486 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 E2F4Q16254 413 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 RINT1Q6NUQ1 792 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 RUFY4Q6ZNE9 571 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 C1orf186Q6ZWK4 172 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 KCNK18Q7Z418 384 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 ZNF410Q86VK4 478 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 CEP57L1Q8IYX8 460 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 C7orf61Q8IZ16 206 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 PDILTQ8N807 584 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 FSIP1Q8NA03 581 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 USP38Q8NB14 1042 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 PPP1R13LQ8WUF5 828 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 DNAJB3Q8WWF6 145 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 DHX38Q92620 1227 aaKnown RBP13.05□□□□□ -0.32
SNHG1-221ENST00000544983 DRC1Q96MC2 740 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 PLIN2Q99541 437 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 PRDM5Q9NQX1 630 aaPredicted RBP13.05□□□□□ -0.32
SNHG1-221ENST00000544983 SUCLA2Q9P2R7 463 aaPredicted RBP13.05□□□□□ -0.32
SNHG1-221ENST00000544983 ODF2LQ9ULJ1 636 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 AKT3Q9Y243 479 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 EVPLQ92817 2033 aa13.05□□□□□ -0.32
SNHG1-221ENST00000544983 ALPK3Q96L96 1907 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 TRIM43BA6NCK2 446 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 RSPH10B2B2RC85 870 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 SSBP05455 408 aaKnown RBP eCLIP13.04□□□□□ -0.32
SNHG1-221ENST00000544983 MYL1P05976 194 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 SLFN14P0C7P3 912 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms