RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	ADAMTS20	P59510	1910 aa		7.29	□□□□□ -1.24
LEMD3-205	ENST00000544506	C9orf118	A6NHY6	69 aa		7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	MAF	O75444	373 aa	Predicted RBP	7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	PRKD3	O94806	890 aa		7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	NCL	P19338	710 aa	Known RBP	7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	IBSP	P21815	317 aa	Predicted RBP	7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	POLD1	P28340	1107 aa		7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	ADCY2	Q08462	1091 aa		7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	TOP3A	Q13472	1001 aa	Predicted RBP	7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	NOLC1	Q14978	699 aa	Known RBP eCLIP	7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	TMEM200B	Q69YZ2	307 aa		7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	GRAMD4	Q6IC98	578 aa		7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	KIAA1841	Q6NSI8	718 aa		7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	FRMD7	Q6ZUT3	714 aa		7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	ESPNL	Q6ZVH7	1005 aa		7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	KANSL1	Q7Z3B3	1105 aa		7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	CXorf67	Q86X51	503 aa	Predicted RBP	7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	SIAH1	Q8IUQ4	282 aa		7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	KRTAP9-2	Q9BYQ4	174 aa		7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	TOPORS	Q9NS56	1045 aa	Predicted RBP	7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	FBXO10	Q9UK96	956 aa		7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	NOP58	Q9Y2X3	529 aa	Known RBP	7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	PHLDB1	Q86UU1	1377 aa		7.28	□□□□□ -1.24
LEMD3-205	ENST00000544506	CUTA	O60888	179 aa		7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506	BMP7	P18075	431 aa		7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506	GJA9	P57773	515 aa		7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506	EVA1C	P58658	441 aa		7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506	NFATC3	Q12968	1075 aa		7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506	KRTAP19-4	Q3LI73	84 aa		7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506	NT5DC1	Q5TFE4	455 aa		7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506	UNQ6494/PRO21346	Q6UXR6	183 aa		7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506		Q6ZUG5	572 aa		7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506	MARCH10	Q8NA82	808 aa	Predicted RBP	7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506	RPGR	Q92834	1020 aa	Known RBP	7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506	FERMT2	Q96AC1	680 aa		7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506	MBD6	Q96DN6	1003 aa		7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506	LCOR	Q96JN0	433 aa	Predicted RBP	7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506	CDC42EP3	Q9UKI2	254 aa		7.27	□□□□□ -1.25
LEMD3-205	ENST00000544506		A0A0G2JNJ9	132 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	MROH6	A6NGR9	719 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	NOBOX	O60393	691 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	ETV4	P43268	484 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	KCNQ1	P51787	676 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	MAP3K12	Q12852	859 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	PDCD1	Q15116	288 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	NECAB2	Q7Z6G3	386 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	REXO1L1P	Q8IX06	675 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	KLHL36	Q8N4N3	616 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	OR5AN1	Q8NGI8	311 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	AJUBA	Q96IF1	538 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	KCNC2	Q96PR1	638 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	KATNBL1	Q9H079	304 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	BARX1	Q9HBU1	254 aa	Predicted RBP	7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	SLC5A4	Q9NY91	659 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506		Q9UFV3	132 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	ADAM29	Q9UKF5	820 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	PPP2R3B	Q9Y5P8	575 aa		7.26	□□□□□ -1.25
LEMD3-205	ENST00000544506	hCG_2014768	A0A024R1R8	64 aa		7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	HMGCR	P04035	888 aa		7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	CSF2RB	P32927	897 aa		7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	MANF	P55145	182 aa	Known RBP	7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	BCAR1	P56945	870 aa		7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	FAM50A	Q14320	339 aa	Known RBP	7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	EIF4H	Q15056	248 aa	Known RBP	7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	GPR155	Q7Z3F1	870 aa		7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	IFNL2	Q8IZJ0	200 aa		7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	BCL6B	Q8N143	479 aa	Predicted RBP	7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	FEZF2	Q8TBJ5	459 aa		7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	PITHD1	Q9GZP4	211 aa	Predicted RBP	7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	MTG2	Q9H4K7	406 aa		7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	KCMF1	Q9P0J7	381 aa		7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	MAGEL2	Q9UJ55	1249 aa		7.25	□□□□□ -1.25
LEMD3-205	ENST00000544506	ST20-MTHFS	A0A0A6YYL1	179 aa		7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	PRSS38	A1L453	326 aa		7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	SASH1	O94885	1247 aa		7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	CLEC2L	P0C7M8	214 aa		7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	ZNF888	P0CJ79	500 aa	Predicted RBP	7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	STAT5B	P51692	787 aa		7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	GUCY2F	P51841	1108 aa		7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	CMIP	Q8IY22	773 aa		7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	RPUSD2	Q8IZ73	545 aa	Known RBP	7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	CNTD1	Q8N815	330 aa		7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	AHCYL2	Q96HN2	611 aa	Known RBP	7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	ANO3	Q9BYT9	981 aa		7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	TRIM8	Q9BZR9	551 aa		7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	USP40	Q9NVE5	1235 aa		7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	DENND2A	Q9ULE3	1009 aa		7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	ZDHHC9	Q9Y397	364 aa		7.24	□□□□□ -1.25
LEMD3-205	ENST00000544506	KRTAP9-6	A0A140TA67	174 aa		7.23	□□□□□ -1.25
LEMD3-205	ENST00000544506	OPHN1	O60890	802 aa		7.23	□□□□□ -1.25
LEMD3-205	ENST00000544506	PCDH8	O95206	1070 aa		7.23	□□□□□ -1.25
LEMD3-205	ENST00000544506	RRAD	P55042	308 aa		7.23	□□□□□ -1.25
LEMD3-205	ENST00000544506	ANTXR2	P58335	489 aa		7.23	□□□□□ -1.25
LEMD3-205	ENST00000544506	FAP	Q12884	760 aa		7.23	□□□□□ -1.25
LEMD3-205	ENST00000544506	DGKD	Q16760	1214 aa		7.23	□□□□□ -1.25
LEMD3-205	ENST00000544506	BMP8A	Q7Z5Y6	402 aa		7.23	□□□□□ -1.25
LEMD3-205	ENST00000544506	RALYL	Q86SE5	291 aa	Known RBP	7.23	□□□□□ -1.25
LEMD3-205	ENST00000544506	CARD11	Q9BXL7	1154 aa		7.23	□□□□□ -1.25
LEMD3-205	ENST00000544506	PUS7L	Q9H0K6	701 aa	Known RBP	7.23	□□□□□ -1.25

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