RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ARHGEF15O94989 841 aa26.1■■□□□ 1.77
CHFR-222ENST00000544093 DNM2P50570 870 aa26.1■■□□□ 1.77
CHFR-222ENST00000544093 CLCN3P51790 818 aa26.1■■□□□ 1.77
CHFR-222ENST00000544093 ORC2Q13416 577 aaPredicted RBP26.1■■□□□ 1.77
CHFR-222ENST00000544093 KIZQ2M2Z5 673 aa26.1■■□□□ 1.77
CHFR-222ENST00000544093 TBC1D32Q96NH3 1257 aa26.1■■□□□ 1.77
CHFR-222ENST00000544093 PCDHA12Q9UN75 941 aa26.1■■□□□ 1.77
CHFR-222ENST00000544093 GPR32O75388 356 aa26.09■■□□□ 1.77
CHFR-222ENST00000544093 VTNP04004 478 aa26.09■■□□□ 1.77
CHFR-222ENST00000544093 MTERF2Q49AM1 385 aa26.09■■□□□ 1.77
CHFR-222ENST00000544093 SUGCTQ9HAC7 445 aa26.09■■□□□ 1.77
CHFR-222ENST00000544093 ERVK-5Q9HDB9 667 aa26.09■■□□□ 1.77
CHFR-222ENST00000544093 DDX11L8A8MPP1 907 aa26.08■■□□□ 1.77
CHFR-222ENST00000544093 STBD1O95210 358 aa26.08■■□□□ 1.77
CHFR-222ENST00000544093 STAG3L1P0CL83 205 aa26.08■■□□□ 1.77
CHFR-222ENST00000544093 GUCY1B3Q02153 619 aa26.08■■□□□ 1.77
CHFR-222ENST00000544093 SPIRE1Q08AE8 756 aa26.08■■□□□ 1.77
CHFR-222ENST00000544093 NFX1Q12986 1120 aaKnown RBP26.08■■□□□ 1.77
CHFR-222ENST00000544093 GNL2Q13823 731 aaKnown RBP26.08■■□□□ 1.77
CHFR-222ENST00000544093 NCAPH2Q6IBW4 605 aa26.08■■□□□ 1.77
CHFR-222ENST00000544093 C4orf19Q8IY42 314 aa26.08■■□□□ 1.77
CHFR-222ENST00000544093 LRRC71Q8N4P6 559 aa26.08■■□□□ 1.77
CHFR-222ENST00000544093 NEK9Q8TD19 979 aa26.08■■□□□ 1.77
CHFR-222ENST00000544093 OSMRQ99650 979 aa26.08■■□□□ 1.77
CHFR-222ENST00000544093 C1orf112Q9NSG2 853 aa26.08■■□□□ 1.77
CHFR-222ENST00000544093 LMCD1Q9NZU5 365 aa26.08■■□□□ 1.77
CHFR-222ENST00000544093 NOC2LQ9Y3T9 749 aaKnown RBP26.08■■□□□ 1.77
CHFR-222ENST00000544093 RALGAPA2Q2PPJ7 1873 aa26.07■■□□□ 1.76
CHFR-222ENST00000544093 NLRP11P59045 1033 aaKnown RBP26.07■■□□□ 1.76
CHFR-222ENST00000544093 ANO5Q75V66 913 aa26.07■■□□□ 1.76
CHFR-222ENST00000544093 OTUD6AQ7L8S5 288 aa26.07■■□□□ 1.76
CHFR-222ENST00000544093 NPAS4Q8IUM7 802 aa26.07■■□□□ 1.76
CHFR-222ENST00000544093 TMEM40Q8WWA1 233 aa26.07■■□□□ 1.76
CHFR-222ENST00000544093 ZSWIM4Q9H7M6 989 aa26.07■■□□□ 1.76
CHFR-222ENST00000544093 TTC12Q9H892 705 aaPredicted RBP26.07■■□□□ 1.76
CHFR-222ENST00000544093 ST3GAL5Q9UNP4 418 aa26.07■■□□□ 1.76
CHFR-222ENST00000544093 RWDD3Q9Y3V2 267 aa26.07■■□□□ 1.76
CHFR-222ENST00000544093 COL4A4P53420 1690 aaPredicted RBP26.06■■□□□ 1.76
CHFR-222ENST00000544093 IGKV6-21A0A0C4DH24 114 aa26.06■■□□□ 1.76
CHFR-222ENST00000544093 MAFO75444 373 aaPredicted RBP26.06■■□□□ 1.76
CHFR-222ENST00000544093 EIF4BP23588 611 aaKnown RBP26.06■■□□□ 1.76
CHFR-222ENST00000544093 TRAPPC10P48553 1259 aa26.06■■□□□ 1.76
CHFR-222ENST00000544093 TMEM266Q2M3C6 531 aa26.06■■□□□ 1.76
CHFR-222ENST00000544093 LINC01599Q8WXQ3 324 aa26.06■■□□□ 1.76
CHFR-222ENST00000544093 SLC7A3Q8WY07 619 aa26.06■■□□□ 1.76
CHFR-222ENST00000544093 CEP89Q96ST8 783 aa26.06■■□□□ 1.76
CHFR-222ENST00000544093 LXNQ9BS40 222 aa26.06■■□□□ 1.76
CHFR-222ENST00000544093 CDHR5Q9HBB8 845 aa26.06■■□□□ 1.76
CHFR-222ENST00000544093 CYP26B1Q9NR63 512 aa26.06■■□□□ 1.76
CHFR-222ENST00000544093 ADGRA3Q8IWK6 1321 aa26.06■■□□□ 1.76
CHFR-222ENST00000544093 NLRC5Q86WI3 1866 aa26.05■■□□□ 1.76
CHFR-222ENST00000544093 DENND3A2RUS2 1198 aa26.05■■□□□ 1.76
CHFR-222ENST00000544093 EPOPA6NHQ4 379 aa26.05■■□□□ 1.76
CHFR-222ENST00000544093 GPC3P51654 580 aa26.05■■□□□ 1.76
CHFR-222ENST00000544093 GRB10Q13322 594 aa26.05■■□□□ 1.76
CHFR-222ENST00000544093 NOSTRINQ8IVI9 506 aa26.05■■□□□ 1.76
CHFR-222ENST00000544093 FIBCD1Q8N539 461 aa26.05■■□□□ 1.76
CHFR-222ENST00000544093 FBXO22Q8NEZ5 403 aa26.05■■□□□ 1.76
CHFR-222ENST00000544093 SCLT1Q96NL6 688 aa26.05■■□□□ 1.76
CHFR-222ENST00000544093 MTMR9Q96QG7 549 aa26.05■■□□□ 1.76
CHFR-222ENST00000544093 ADAMTS10Q9H324 1103 aa26.05■■□□□ 1.76
CHFR-222ENST00000544093 TMX1Q9H3N1 280 aa26.05■■□□□ 1.76
CHFR-222ENST00000544093 NOL7Q9UMY1 257 aaKnown RBP26.05■■□□□ 1.76
CHFR-222ENST00000544093 MTCH2Q9Y6C9 303 aa26.05■■□□□ 1.76
CHFR-222ENST00000544093 RFXAPO00287 272 aa26.04■■□□□ 1.76
CHFR-222ENST00000544093 YWHABP31946 246 aaKnown RBP26.04■■□□□ 1.76
CHFR-222ENST00000544093 RFC5P40937 340 aa26.04■■□□□ 1.76
CHFR-222ENST00000544093 SARSP49591 514 aaKnown RBP26.04■■□□□ 1.76
CHFR-222ENST00000544093 RTN4RL1Q86UN2 441 aaPredicted RBP26.04■■□□□ 1.76
CHFR-222ENST00000544093 FAM228AQ86W67 206 aa26.04■■□□□ 1.76
CHFR-222ENST00000544093 TMX3Q96JJ7 454 aa26.04■■□□□ 1.76
CHFR-222ENST00000544093 PPP1R16BQ96T49 567 aa26.04■■□□□ 1.76
CHFR-222ENST00000544093 RC3H2Q9HBD1 1191 aaKnown RBP26.04■■□□□ 1.76
CHFR-222ENST00000544093 RGS18Q9NS28 235 aa26.04■■□□□ 1.76
CHFR-222ENST00000544093 MTUS1Q9ULD2 1270 aa26.04■■□□□ 1.76
CHFR-222ENST00000544093 LRFN2Q9ULH4 789 aa26.04■■□□□ 1.76
CHFR-222ENST00000544093 PRRC2BQ5JSZ5 2229 aaKnown RBP26.04■■□□□ 1.76
CHFR-222ENST00000544093 GAS2O43903 313 aaKnown RBP26.03■■□□□ 1.76
CHFR-222ENST00000544093 DGKIO75912 1065 aa26.03■■□□□ 1.76
CHFR-222ENST00000544093 MCM7P33993 719 aa26.03■■□□□ 1.76
CHFR-222ENST00000544093 TXKP42681 527 aa26.03■■□□□ 1.76
CHFR-222ENST00000544093 SLC24A5Q71RS6 500 aa26.03■■□□□ 1.76
CHFR-222ENST00000544093 CRIPAKQ8N1N5 446 aa26.03■■□□□ 1.76
CHFR-222ENST00000544093 NLRP7Q8WX94 980 aa26.03■■□□□ 1.76
CHFR-222ENST00000544093 PPM1EQ8WY54 764 aa26.03■■□□□ 1.76
CHFR-222ENST00000544093 ZNF689Q96CS4 500 aaPredicted RBP26.03■■□□□ 1.76
CHFR-222ENST00000544093 CEP170P1Q96L14 293 aa26.03■■□□□ 1.76
CHFR-222ENST00000544093 TMEM150BA6NC51 233 aa26.02■■□□□ 1.76
CHFR-222ENST00000544093 RBAK-RBAKDNI3L0D1 243 aa26.02■■□□□ 1.76
CHFR-222ENST00000544093 LPXNO60711 386 aa26.02■■□□□ 1.76
CHFR-222ENST00000544093 LYPLA2O95372 231 aa26.02■■□□□ 1.76
CHFR-222ENST00000544093 DARSP14868 501 aaKnown RBP26.02■■□□□ 1.76
CHFR-222ENST00000544093 ATP2B1P20020 1258 aa26.02■■□□□ 1.76
CHFR-222ENST00000544093 BTG3Q14201 252 aaPredicted RBP26.02■■□□□ 1.76
CHFR-222ENST00000544093 EPC2Q52LR7 807 aa26.02■■□□□ 1.76
CHFR-222ENST00000544093 PLA2G4FQ68DD2 849 aa26.02■■□□□ 1.76
CHFR-222ENST00000544093 ZNF410Q86VK4 478 aa26.02■■□□□ 1.76
CHFR-222ENST00000544093 CMTR2Q8IYT2 770 aaKnown RBP26.02■■□□□ 1.76
CHFR-222ENST00000544093 DYDC2Q96IM9 177 aa26.02■■□□□ 1.76
CHFR-222ENST00000544093 ADAM2Q99965 735 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms