RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 CSPP1Q1MSJ5 1256 aa14.8□□□□□ -0.04
RTN3-213ENST00000543552 MOXD1Q6UVY6 613 aa14.8□□□□□ -0.04
RTN3-213ENST00000543552 TRMT1LQ7Z2T5 733 aaKnown RBP14.8□□□□□ -0.04
RTN3-213ENST00000543552 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.8□□□□□ -0.04
RTN3-213ENST00000543552 OSMRQ99650 979 aa14.8□□□□□ -0.04
RTN3-213ENST00000543552 PLAGL2Q9UPG8 496 aa14.8□□□□□ -0.04
RTN3-213ENST00000543552 PCDHB12Q9Y5F1 795 aa14.8□□□□□ -0.04
RTN3-213ENST00000543552 CYP3A7-CYP3A51PA0A087WV96 503 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 FSD2A1L4K1 749 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 H3BQ06 376 aaPredicted RBP14.79□□□□□ -0.04
RTN3-213ENST00000543552 HOXA2O43364 376 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 IBSPP21815 317 aaPredicted RBP14.79□□□□□ -0.04
RTN3-213ENST00000543552 CYP3A7P24462 503 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 SSTR3P32745 418 aaPredicted RBP14.79□□□□□ -0.04
RTN3-213ENST00000543552 CLCN3P51790 818 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 CDC42EP1Q00587 391 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 TBC1D8BQ0IIM8 1120 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 STK3Q13188 491 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 NONOQ15233 471 aaKnown RBP eCLIP14.79□□□□□ -0.04
RTN3-213ENST00000543552 SPOUT1Q5T280 376 aaKnown RBP14.79□□□□□ -0.04
RTN3-213ENST00000543552 EFCAB12Q6NXP0 572 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 MIER3Q7Z3K6 550 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 KRT25Q7Z3Z0 450 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 FAM178BQ8IXR5 827 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 TMEM40Q8WWA1 233 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 SCLT1Q96NL6 688 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 ELAC1Q9H777 363 aaKnown RBP14.79□□□□□ -0.04
RTN3-213ENST00000543552 CDHR5Q9HBB8 845 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 ATP6V0A4Q9HBG4 840 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 TMEM161AQ9NX61 479 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 PRKAG3Q9UGI9 489 aa14.79□□□□□ -0.04
RTN3-213ENST00000543552 EVPLQ92817 2033 aa14.78□□□□□ -0.04
RTN3-213ENST00000543552 STK36Q9NRP7 1315 aa14.78□□□□□ -0.04
RTN3-213ENST00000543552 C9IYK1 514 aa14.78□□□□□ -0.04
RTN3-213ENST00000543552 GPR32O75388 356 aa14.78□□□□□ -0.04
RTN3-213ENST00000543552 ZSCAN20P17040 1043 aaPredicted RBP14.78□□□□□ -0.04
RTN3-213ENST00000543552 EIF4BP23588 611 aaKnown RBP14.78□□□□□ -0.04
RTN3-213ENST00000543552 NLRP11P59045 1033 aaKnown RBP14.78□□□□□ -0.04
RTN3-213ENST00000543552 UBE3AQ05086 875 aa14.78□□□□□ -0.04
RTN3-213ENST00000543552 ANKRD1Q15327 319 aa14.78□□□□□ -0.04
RTN3-213ENST00000543552 FAM228AQ86W67 206 aa14.78□□□□□ -0.04
RTN3-213ENST00000543552 GJD3Q8N144 294 aa14.78□□□□□ -0.04
RTN3-213ENST00000543552 KLHL23Q8NBE8 558 aa14.78□□□□□ -0.04
RTN3-213ENST00000543552 PPP1R16BQ96T49 567 aa14.78□□□□□ -0.04
RTN3-213ENST00000543552 NAP1L4Q99733 375 aaKnown RBP14.78□□□□□ -0.04
RTN3-213ENST00000543552 SLKQ9H2G2 1235 aaPredicted RBP14.78□□□□□ -0.04
RTN3-213ENST00000543552 UNC45AQ9H3U1 944 aa14.78□□□□□ -0.04
RTN3-213ENST00000543552 ALG13Q9NP73 1137 aaKnown RBP14.78□□□□□ -0.04
RTN3-213ENST00000543552 DDX25Q9UHL0 483 aaKnown RBP14.78□□□□□ -0.04
RTN3-213ENST00000543552 CCDC194A0A1B0GVG4 234 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 TBKBP1A7MCY6 615 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 ZNF862O60290 1169 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 MGEA5O60502 916 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 DKC1O60832 514 aaKnown RBP eCLIP14.77□□□□□ -0.05
RTN3-213ENST00000543552 PSMD10O75832 226 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 ITGB1P05556 798 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 IL9P15248 144 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 GCFC2P16383 781 aaKnown RBP14.77□□□□□ -0.05
RTN3-213ENST00000543552 DNM2P50570 870 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 ANAPC15P60006 121 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 HYAL1Q12794 435 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 CTC1Q2NKJ3 1217 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 XKR3Q5GH77 459 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 ABI1Q8IZP0 508 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 LRRC71Q8N4P6 559 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 WASF1Q92558 559 aa14.77□□□□□ -0.05
RTN3-213ENST00000543552 POP1Q99575 1024 aaKnown RBP14.77□□□□□ -0.05
RTN3-213ENST00000543552 JPH2Q9BR39 696 aaPredicted RBP14.77□□□□□ -0.05
RTN3-213ENST00000543552 SEPT9Q9UHD8 586 aaPredicted RBP14.77□□□□□ -0.05
RTN3-213ENST00000543552 KIAA1671Q9BY89 1806 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 M0R2N6 131 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 TDP2O95551 362 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 LAG3P18627 525 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 NDUFV1P49821 464 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 FAM189BP81408 668 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 UGCGQ16739 394 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 TMEM31Q5JXX7 168 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 PDE12Q6L8Q7 609 aaKnown RBP14.76□□□□□ -0.05
RTN3-213ENST00000543552 LINC01465Q8N7H1 131 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 ETNPPLQ8TBG4 499 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 SPPL3Q8TCT6 385 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 POF1BQ8WVV4 589 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 NLRP7Q8WX94 980 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 RSPH1Q8WYR4 309 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 MBOAT7Q96N66 472 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 DACT1Q9NYF0 836 aa14.76□□□□□ -0.05
RTN3-213ENST00000543552 WDR81Q562E7 1941 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 CSPG5O95196 566 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 ALADP13716 330 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 DARSP14868 501 aaKnown RBP14.75□□□□□ -0.05
RTN3-213ENST00000543552 GATMP50440 423 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 GPC3P51654 580 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 SMAD4Q13485 552 aaKnown RBP14.75□□□□□ -0.05
RTN3-213ENST00000543552 DSC3Q14574 896 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 LETM2Q2VYF4 491 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 ERICH6BQ5W0A0 696 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 EXOC8Q8IYI6 725 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 THNSL1Q8IYQ7 743 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 LRRC43Q8N309 656 aa14.75□□□□□ -0.05
RTN3-213ENST00000543552 FAM20AQ96MK3 541 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms