RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PADI6Q6TGC4 694 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 CCDC73Q6ZRK6 1079 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 LRRC8DQ7L1W4 858 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 SERINC5Q86VE9 423 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 PDILTQ8N807 584 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 LEO1Q8WVC0 666 aaPredicted RBP7.03□□□□□ -1.28
LTBR-212ENST00000543542 TCP11Q8WWU5 503 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 NLRP7Q8WX94 980 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 BADQ92934 168 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 TRIM43Q96BQ3 446 aaPredicted RBP7.03□□□□□ -1.28
LTBR-212ENST00000543542 SCLYQ96I15 445 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 PNMA5Q96PV4 448 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 MMTAG2Q9BU76 263 aaKnown RBP7.03□□□□□ -1.28
LTBR-212ENST00000543542 NOC4LQ9BVI4 516 aaKnown RBP7.03□□□□□ -1.28
LTBR-212ENST00000543542 CCSER1Q9C0I3 900 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 BHMT2Q9H2M3 363 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 ATP6V0A4Q9HBG4 840 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 SUCLA2Q9P2R7 463 aaPredicted RBP7.03□□□□□ -1.28
LTBR-212ENST00000543542 DBR1Q9UK59 544 aaKnown RBP7.03□□□□□ -1.28
LTBR-212ENST00000543542 PCDHA7Q9UN72 937 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 PPME1Q9Y570 386 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 EVPLQ92817 2033 aa7.03□□□□□ -1.28
LTBR-212ENST00000543542 UMODL1Q5DID0 1318 aa7.02□□□□□ -1.28
LTBR-212ENST00000543542 MBLAC1A4D2B0 266 aaPredicted RBP7.02□□□□□ -1.29
LTBR-212ENST00000543542 H0YGN5 161 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 PITPNM1O00562 1244 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 TNRC18O15417 2968 aaPredicted RBP7.02□□□□□ -1.29
LTBR-212ENST00000543542 GAS2O43903 313 aaKnown RBP7.02□□□□□ -1.29
LTBR-212ENST00000543542 CAND2O75155 1236 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 MAFO75444 373 aaPredicted RBP7.02□□□□□ -1.29
LTBR-212ENST00000543542 DGAT1O75907 488 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 STBD1O95210 358 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 VTNP04004 478 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 PLA2G4BP0C869 781 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 SELPP16109 830 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 HOXC8P31273 242 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 ADAM17P78536 824 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 MRPS6P82932 125 aaKnown RBP7.02□□□□□ -1.29
LTBR-212ENST00000543542 FPGSQ05932 587 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 GRB10Q13322 594 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 PPIGQ13427 754 aaKnown RBP eCLIP7.02□□□□□ -1.29
LTBR-212ENST00000543542 TARBP2Q15633 366 aaKnown RBP7.02□□□□□ -1.29
LTBR-212ENST00000543542 ECM1Q16610 540 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 ZNF618Q5T7W0 954 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 ADALQ6DHV7 355 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 MFSD5Q6N075 450 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 USP49Q70CQ1 688 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 DEFB128Q7Z7B8 93 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 RHPN2Q8IUC4 686 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 CEP57L1Q8IYX8 460 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 RPUSD2Q8IZ73 545 aaKnown RBP7.02□□□□□ -1.29
LTBR-212ENST00000543542 NME8Q8N427 588 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 ZNF579Q8NAF0 562 aaKnown RBP7.02□□□□□ -1.29
LTBR-212ENST00000543542 MCPH1Q8NEM0 835 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 PSPC1Q8WXF1 523 aaKnown RBP7.02□□□□□ -1.29
LTBR-212ENST00000543542 DHX38Q92620 1227 aaKnown RBP7.02□□□□□ -1.29
LTBR-212ENST00000543542 WNT8BQ93098 351 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 TMEM143Q96AN5 459 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 DHX58Q96C10 678 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 ZNF668Q96K58 619 aaPredicted RBP7.02□□□□□ -1.29
LTBR-212ENST00000543542 PYM1Q9BRP8 204 aaKnown RBP7.02□□□□□ -1.29
LTBR-212ENST00000543542 ZHX3Q9H4I2 956 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 TBX21Q9UL17 535 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 TRPV2Q9Y5S1 764 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 CDY2AQ9Y6F7 541 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 MORC2Q9Y6X9 1032 aaPredicted RBP7.02□□□□□ -1.29
LTBR-212ENST00000543542 TANC1Q9C0D5 1861 aa7.02□□□□□ -1.29
LTBR-212ENST00000543542 MKI67P46013 3256 aaKnown RBP7.01□□□□□ -1.29
LTBR-212ENST00000543542 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.01□□□□□ -1.29
LTBR-212ENST00000543542 A0A1B0GVL5 298 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 ZBTB42B2RXF5 422 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 GOLGA6L22H0YM25 854 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 POLR2DO15514 142 aaKnown RBP7.01□□□□□ -1.29
LTBR-212ENST00000543542 PARNO95453 639 aaKnown RBP7.01□□□□□ -1.29
LTBR-212ENST00000543542 IQCF3P0C7M6 154 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 SRGAP2CP0DJJ0 459 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 ACTN1P12814 892 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 RFC2P35250 354 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 NLRP11P59045 1033 aaKnown RBP7.01□□□□□ -1.29
LTBR-212ENST00000543542 CDC42EP1Q00587 391 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 RAD51AP2Q09MP3 1159 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 TFDP1Q14186 410 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 MCM6Q14566 821 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 TMEM132AQ24JP5 1023 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 KIZQ2M2Z5 673 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 TMEM119Q4V9L6 283 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 ODR4Q5SWX8 454 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 HYIQ5T013 277 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 SHC4Q6S5L8 630 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 SV2BQ7L1I2 683 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 KCNK18Q7Z418 384 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 GPBP1Q86WP2 473 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 KIAA0319LQ8IZA0 1049 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 KCTD17Q8N5Z5 321 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 FSIP1Q8NA03 581 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 IQUBQ8NA54 791 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 MRPS27Q92552 414 aaKnown RBP7.01□□□□□ -1.29
LTBR-212ENST00000543542 LARP4BQ92615 738 aaKnown RBP7.01□□□□□ -1.29
LTBR-212ENST00000543542 RAD54LQ92698 747 aa7.01□□□□□ -1.29
LTBR-212ENST00000543542 IFT74Q96LB3 600 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms