RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 ALKBH8Q96BT7 664 aaKnown RBP20.65■□□□□ 0.9
HDAC4-215ENST00000543185 ARL2BPQ9Y2Y0 163 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 A0A0D9SFI3 127 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 RCOR1Q9UKL0 485 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 SLC7A5Q01650 507 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 DIAPH2O60879 1101 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 ABCE1P61221 599 aaKnown RBP20.65■□□□□ 0.9
HDAC4-215ENST00000543185 ADCK1Q86TW2 530 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 TGFBRAP1Q8WUH2 860 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 NEURL1BA8MQ27 555 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 MXI1P50539 228 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 OSBPL5Q9H0X9 879 aaPredicted RBP20.65■□□□□ 0.9
HDAC4-215ENST00000543185 DCAF15Q66K64 600 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 SLFN12LQ6IEE8 588 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 AMNQ9BXJ7 453 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 ADA2Q9NZK5 511 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 AP4S1Q9Y587 144 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 PABPC4Q13310 644 aaKnown RBP eCLIP20.64■□□□□ 0.9
HDAC4-215ENST00000543185 SLC52A2Q9HAB3 445 aa20.64■□□□□ 0.9
HDAC4-215ENST00000543185 MLH3Q9UHC1 1453 aa20.64■□□□□ 0.9
HDAC4-215ENST00000543185 RPAP1Q9BWH6 1393 aaPredicted RBP20.64■□□□□ 0.9
HDAC4-215ENST00000543185 DEPDC1Q5TB30 811 aa20.64■□□□□ 0.9
HDAC4-215ENST00000543185 PLEKHM3Q6ZWE6 761 aa20.64■□□□□ 0.9
HDAC4-215ENST00000543185 PCDHA1Q9Y5I3 950 aa20.64■□□□□ 0.9
HDAC4-215ENST00000543185 LSG1Q9H089 658 aaKnown RBP20.64■□□□□ 0.89
HDAC4-215ENST00000543185 CDR2LQ86X02 465 aaPredicted RBP20.64■□□□□ 0.89
HDAC4-215ENST00000543185 TTC39CQ8N584 583 aa20.64■□□□□ 0.89
HDAC4-215ENST00000543185 COG1Q8WTW3 980 aa20.64■□□□□ 0.89
HDAC4-215ENST00000543185 RESP18Q5W5W9 173 aa20.64■□□□□ 0.89
HDAC4-215ENST00000543185 FBXO11Q86XK2 927 aa20.64■□□□□ 0.89
HDAC4-215ENST00000543185 HOMEZQ8IX15 550 aa20.64■□□□□ 0.89
HDAC4-215ENST00000543185 CIAO1O76071 339 aa20.64■□□□□ 0.89
HDAC4-215ENST00000543185 FTCDO95954 541 aa20.64■□□□□ 0.89
HDAC4-215ENST00000543185 ALDH1B1P30837 517 aa20.64■□□□□ 0.89
HDAC4-215ENST00000543185 RUNX1T1Q06455 604 aa20.64■□□□□ 0.89
HDAC4-215ENST00000543185 SLC44A4Q53GD3 710 aa20.64■□□□□ 0.89
HDAC4-215ENST00000543185 NSMFQ6X4W1 530 aa20.64■□□□□ 0.89
HDAC4-215ENST00000543185 BTBD18B2RXH4 712 aa20.64■□□□□ 0.89
HDAC4-215ENST00000543185 STMN3Q9NZ72 180 aa20.64■□□□□ 0.89
HDAC4-215ENST00000543185 USP19O94966 1318 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 GSPT1P15170 499 aaKnown RBP20.63■□□□□ 0.89
HDAC4-215ENST00000543185 C16orf89Q6UX73 402 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 SRLQ86TD4 932 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 TUBGCP3Q96CW5 907 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 CMTM5Q96DZ9 223 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 MLXIPQ9HAP2 919 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 PMS1P54277 932 aaKnown RBP20.63■□□□□ 0.89
HDAC4-215ENST00000543185 TSTA3Q13630 321 aaPredicted RBP20.63■□□□□ 0.89
HDAC4-215ENST00000543185 TTC17Q96AE7 1141 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 WNT8AQ9H1J5 351 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 ANXA13P27216 316 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 PMS2P54278 862 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 TRAF7Q6Q0C0 670 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 FAM161BQ96MY7 647 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 CCDC134Q9H6E4 229 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 SIX6OS1Q8N1H7 587 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 PSMA2P25787 234 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 SAYSD1Q9NPB0 183 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 KRT7P08729 469 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 PHF21AQ96BD5 680 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 UBE2TQ9NPD8 197 aaPredicted RBP20.63■□□□□ 0.89
HDAC4-215ENST00000543185 E7ENQ6 273 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 GJC2Q5T442 439 aaPredicted RBP20.63■□□□□ 0.89
HDAC4-215ENST00000543185 NDUFA13Q9P0J0 144 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 ERBB4Q15303 1308 aa20.63■□□□□ 0.89
HDAC4-215ENST00000543185 RASSF9O75901 435 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 GFPT2O94808 682 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 KRT31Q15323 416 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 PRUNE1Q86TP1 453 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 C19orf60Q96EN9 201 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 CXorf56Q9H5V9 222 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 WDR91A4D1P6 747 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 FAM187AA6NFU0 413 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 TTLL1O95922 423 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 LINC00301Q8NCQ3 95 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 MAP4K1Q92918 833 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 CNBD2Q96M20 576 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 CCNE1P24864 410 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 ARFIP2P53365 341 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 CUL4AQ13619 759 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 NR1H4Q96RI1 486 aaPredicted RBP20.62■□□□□ 0.89
HDAC4-215ENST00000543185 SEL1LQ9UBV2 794 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 CRYMQ14894 314 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 MFSD14BQ5SR56 506 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 MIS18BP1Q6P0N0 1132 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 FGAP02671 866 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 NAALADL2Q58DX5 795 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 TJAP1Q5JTD0 557 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 METTL23Q86XA0 190 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 EPS8L2Q9H6S3 715 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 TAP1Q03518 808 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 FAM193BQ96PV7 902 aaPredicted RBP20.62■□□□□ 0.89
HDAC4-215ENST00000543185 ARHGEF5Q12774 1597 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 KCNA3P22001 575 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 CDC27P30260 824 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 APOA5Q6Q788 366 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 LUZP2Q86TE4 346 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 ANKRD13CQ8N6S4 541 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 CCDC90BQ9GZT6 254 aa20.62■□□□□ 0.89
HDAC4-215ENST00000543185 FAF2Q96CS3 445 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms