RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 DENND1CQ8IV53 801 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 NKAPQ8N5F7 415 aaKnown RBP4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 LINC00116Q8NCU8 138 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 C1GALT1C1Q96EU7 318 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 KRTAP4-5Q9BYR2 181 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 QRSL1Q9H0R6 528 aaKnown RBP4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 ACSS2Q9NR19 701 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 MBNL3Q9NUK0 354 aaKnown RBP4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 TRMT13Q9NUP7 481 aaKnown RBP4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 AP5S1Q9NUS5 200 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 MSRAQ9UJ68 235 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 TUBD1Q9UJT1 453 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 CAPN6Q9Y6Q1 641 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 CEP164Q9UPV0 1460 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 SMARCA4P51532 1647 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 TCRBV5S4A2TA0A5A2 114 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 C7orf72A4D263 438 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 PRR33A8MZF0 331 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 H7BY64 318 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 DTNBO60941 627 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 TBC1D8O95759 1140 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 CYP17A1P05093 508 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 CEACAM5P06731 702 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 SRFP11831 508 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 RENBPP51606 427 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 BTKQ06187 659 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 ZNF124Q15973 351 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 PDCD2Q16342 344 aaPredicted RBP4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 PKN1Q16512 942 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 AOC3Q16853 763 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 CPZQ66K79 652 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 CC2D1AQ6P1N0 951 aaPredicted RBP4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 CYP2R1Q6VVX0 501 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 ARHGAP27Q6ZUM4 889 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 KIAA0319LQ8IZA0 1049 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 MFSD4AQ8N468 514 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 NAT16Q8N8M0 369 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 DEPTORQ8TB45 409 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 RTF1Q92541 710 aaKnown RBP4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 HRASLS5Q96KN8 279 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 SLC2A13Q96QE2 648 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 TBCBQ99426 244 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 CRB3Q9BUF7 120 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 CDADC1Q9BWV3 514 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 APOL5Q9BWW9 433 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 B3GNT5Q9BYG0 378 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 BHMT2Q9H2M3 363 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 TRIT1Q9H3H1 467 aaKnown RBP4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 BTG4Q9NY30 223 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 C9orf78Q9NZ63 289 aaPredicted RBP4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 RTEL1Q9NZ71 1219 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 USP36Q9P275 1121 aaKnown RBP4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 SERPINB13Q9UIV8 391 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 KCNG1Q9UIX4 513 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 ADAMTS6Q9UKP5 1117 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 TCFL5Q9UL49 500 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 POLHQ9Y253 713 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 B3GALT1Q9Y5Z6 326 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 SCINQ9Y6U3 715 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 ARAP1Q96P48 1450 aa4.8□□□□□ -1.64
SFSWAP-211ENST00000542813 TMEM265A0A087WTH1 108 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 WTIPA6NIX2 430 aaPredicted RBP4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 RASA4BC9J798 803 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 GOLIM4O00461 696 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 MAN2B1O00754 1011 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 NKRFO15226 690 aaKnown RBP eCLIP4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 MAFGO15525 162 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 RASA4O43374 803 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 B3GALT2O43825 422 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 NPHS1O60500 1241 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 UBXN7O94888 489 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 HSP90AA1P07900 732 aaKnown RBP4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 TMEM253P0C7T8 217 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 COL6A2P12110 1019 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 MTHFD2P13995 350 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 PDCP20941 246 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 ENDOUP21128 410 aaKnown RBP4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 CD96P40200 585 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 CCT5P48643 541 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 OXCT1P55809 520 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 ELF2Q15723 593 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 UGT8Q16880 541 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 SLC4A8Q2Y0W8 1093 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 PGS1Q32NB8 556 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 CT83Q5H943 113 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 FIGNQ5HY92 759 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 HABP4Q5JVS0 413 aaKnown RBP4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 RNF220Q5VTB9 566 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 MMS22LQ6ZRQ5 1243 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 CEP68Q76N32 757 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 FAM214BQ7L5A3 538 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 OTOP3Q7RTS5 596 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 KCNK18Q7Z418 384 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 CXorf67Q86X51 503 aaPredicted RBP4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 SIRT2Q8IXJ6 389 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 THEMISQ8N1K5 641 aaPredicted RBP4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 ZNF496Q96IT1 587 aaPredicted RBP4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 CDC5LQ99459 802 aaKnown RBP4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 FOXP3Q9BZS1 431 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms