RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 MGEA5O60502 916 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 TMOD1P28289 359 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 SREBF1P36956 1147 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 TCF15Q12870 199 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 ITGB3BPQ13352 177 aaPredicted RBP13.93□□□□□ -0.18
SNHG1-216ENST00000541416 WWC2Q6AWC2 1192 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 MCTP2Q6DN12 878 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 ABHD15Q6UXT9 468 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 TMC7Q7Z402 723 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 SGMS1Q86VZ5 419 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 UBALD2Q8IYN6 164 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 LRRC43Q8N309 656 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 METTL13Q8N6R0 699 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 TMEM87AQ8NBN3 555 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 BBXQ8WY36 941 aaPredicted RBP13.93□□□□□ -0.18
SNHG1-216ENST00000541416 ASIC4Q96FT7 647 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 ZNF558Q96NG5 402 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 MAP7D2Q96T17 732 aa13.93□□□□□ -0.18
SNHG1-216ENST00000541416 CARNS1A5YM72 827 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 SMCO2A6NFE2 343 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 DDX39AO00148 427 aaKnown RBP13.92□□□□□ -0.18
SNHG1-216ENST00000541416 MAGEB2O15479 319 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 FAM189BP81408 668 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 SETQ01105 290 aaPredicted RBP13.92□□□□□ -0.18
SNHG1-216ENST00000541416 ITIH3Q06033 890 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 MTMR3Q13615 1198 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 SMC1AQ14683 1233 aaKnown RBP13.92□□□□□ -0.18
SNHG1-216ENST00000541416 KIZQ2M2Z5 673 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 RNF20Q5VTR2 975 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 SWSAP1Q6NVH7 229 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 KCNT2Q6UVM3 1135 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 OSMRQ99650 979 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 CWH43Q9H720 699 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 TSHZ2Q9NRE2 1034 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 TBC1D22BQ9NU19 505 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 SPG21Q9NZD8 308 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 KMT2EQ8IZD2 1858 aa13.92□□□□□ -0.18
SNHG1-216ENST00000541416 IPO5O00410 1097 aaKnown RBP13.91□□□□□ -0.18
SNHG1-216ENST00000541416 SLC27A2O14975 620 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 PSAPP07602 524 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 FGFR1P11362 822 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 RTN1Q16799 776 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 LLGL2Q6P1M3 1020 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 FAM228AQ86W67 206 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 PLA2G4DQ86XP0 818 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 RAB11FIP4Q86YS3 637 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 CCDC60Q8IWA6 550 aaPredicted RBP13.91□□□□□ -0.18
SNHG1-216ENST00000541416 SMAP1Q8IYB5 467 aaPredicted RBP13.91□□□□□ -0.18
SNHG1-216ENST00000541416 VN1R2Q8NFZ6 395 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 TMEM40Q8WWA1 233 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 RSPH1Q8WYR4 309 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 PGBD1Q96JS3 809 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 FAM167AQ96KS9 214 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 RIPOR3Q96MK2 946 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 S1PR5Q9H228 398 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 CDHR5Q9HBB8 845 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 BARHL2Q9NY43 387 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 SORCS3Q9UPU3 1222 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 EVPLQ92817 2033 aa13.91□□□□□ -0.18
SNHG1-216ENST00000541416 ZDBF2Q9HCK1 2354 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 ZBTB43O43298 467 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 C22orf31O95567 290 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 CCNE2O96020 404 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 VTNP04004 478 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 MTHFRP42898 656 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 ALDH7A1P49419 539 aaKnown RBP13.9□□□□□ -0.18
SNHG1-216ENST00000541416 VCPP55072 806 aaKnown RBP13.9□□□□□ -0.18
SNHG1-216ENST00000541416 RBM10P98175 930 aaKnown RBP13.9□□□□□ -0.18
SNHG1-216ENST00000541416 FOXK2Q01167 660 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 APOBRQ0VD83 1088 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 KCNC3Q14003 757 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 CREB3L3Q68CJ9 461 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 ZNF746Q6NUN9 644 aaPredicted RBP13.9□□□□□ -0.18
SNHG1-216ENST00000541416 SYCE2Q6PIF2 218 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 APOA5Q6Q788 366 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 KREMEN2Q8NCW0 462 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 CCDC12Q8WUD4 166 aaPredicted RBP13.9□□□□□ -0.18
SNHG1-216ENST00000541416 SCLT1Q96NL6 688 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 PPP1R16BQ96T49 567 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 ZNF577Q9BSK1 485 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 APOL5Q9BWW9 433 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 MRPL9Q9BYD2 267 aaKnown RBP13.9□□□□□ -0.18
SNHG1-216ENST00000541416 AKT3Q9Y243 479 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 SAMM50Q9Y512 469 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 PCDHA10Q9Y5I2 948 aa13.9□□□□□ -0.18
SNHG1-216ENST00000541416 MAFBQ9Y5Q3 323 aaPredicted RBP13.9□□□□□ -0.18
SNHG1-216ENST00000541416 MYH9P35579 1960 aaKnown RBP13.9□□□□□ -0.18
SNHG1-216ENST00000541416 CNTNAP5Q8WYK1 1306 aa13.9□□□□□ -0.19
SNHG1-216ENST00000541416 GPR32O75388 356 aa13.89□□□□□ -0.19
SNHG1-216ENST00000541416 EOMESO95936 686 aa13.89□□□□□ -0.19
SNHG1-216ENST00000541416 EIF4BP23588 611 aaKnown RBP13.89□□□□□ -0.19
SNHG1-216ENST00000541416 CA8P35219 290 aa13.89□□□□□ -0.19
SNHG1-216ENST00000541416 DSC3Q14574 896 aa13.89□□□□□ -0.19
SNHG1-216ENST00000541416 PLCD3Q8N3E9 789 aa13.89□□□□□ -0.19
SNHG1-216ENST00000541416 MRPL43Q8N983 215 aaKnown RBP13.89□□□□□ -0.19
SNHG1-216ENST00000541416 CASD1Q96PB1 797 aa13.89□□□□□ -0.19
SNHG1-216ENST00000541416 LRRC2Q9BYS8 371 aa13.89□□□□□ -0.19
SNHG1-216ENST00000541416 ADAM7Q9H2U9 754 aa13.89□□□□□ -0.19
SNHG1-216ENST00000541416 FAM86C1Q9NVL1 165 aa13.89□□□□□ -0.19
SNHG1-216ENST00000541416 DACT1Q9NYF0 836 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms