RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SMC1BQ8NDV3 1235 aa13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 CEP170P1Q96L14 293 aa13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 C16orf45Q96MC5 204 aaPredicted RBP13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 ERGIC2Q96RQ1 377 aa13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 PDLIM7Q9NR12 457 aa13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 MORF4L1Q9UBU8 362 aa13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 SEL1LQ9UBV2 794 aa13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 SEPT9Q9UHD8 586 aaPredicted RBP13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 DDX41Q9UJV9 622 aaKnown RBP13.52□□□□□ -0.25
AP003559.1-201ENST00000540906 IGKV6D-21A0A0A0MT36 114 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 A0A0U1RQJ8 604 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 K7ENM7 598 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 IGF2BP3O00425 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 KIF20AO95235 890 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 ZBTB48P10074 688 aaPredicted RBP13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 PLS3P13797 630 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 MARSP56192 900 aaKnown RBP13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 KCNMA1Q12791 1236 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 FAM102BQ5T8I3 360 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 MIS18BP1Q6P0N0 1132 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 GPIHBP1Q8IV16 184 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 MORC4Q8TE76 937 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 ATRIPQ8WXE1 791 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 ATP6V0A1Q93050 837 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 PPP1R13BQ96KQ4 1090 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 PANX2Q96RD6 677 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 CEP89Q96ST8 783 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 DESI2Q9BSY9 194 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 ABHD10Q9NUJ1 306 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 AGPAT5Q9NUQ2 364 aa13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 MAFBQ9Y5Q3 323 aaPredicted RBP13.51□□□□□ -0.25
AP003559.1-201ENST00000540906 SLC16A4O15374 487 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 CALUO43852 315 aaPredicted RBP13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 FGFR1OPO95684 399 aaKnown RBP13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 FECHP22830 423 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 ADORA2AP29274 412 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 PEX3P56589 373 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 ZNF792Q3KQV3 632 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 MTERF2Q49AM1 385 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 GJC2Q5T442 439 aaPredicted RBP13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 TRIM50Q86XT4 487 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 CCDC112Q8NEF3 446 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 ZSWIM2Q8NEG5 633 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 ZNF302Q9NR11 478 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 KCND1Q9NSA2 647 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 ADGRA3Q8IWK6 1321 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 CETN3O15182 167 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 KRT9P35527 623 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 HSDL1Q3SXM5 330 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 CCDC62Q6P9F0 684 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 ARMCX2Q7L311 632 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 BORCS6Q96GS4 357 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 CCDC43Q96MW1 224 aaKnown RBP13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 CHP1Q99653 195 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 CYP26B1Q9NR63 512 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 AGPAT3Q9NRZ7 376 aa13.5□□□□□ -0.25
AP003559.1-201ENST00000540906 ADGRA2Q96PE1 1338 aa13.49□□□□□ -0.25
AP003559.1-201ENST00000540906 STX10O60499 249 aa13.49□□□□□ -0.25
AP003559.1-201ENST00000540906 KCNJ6P48051 423 aa13.49□□□□□ -0.25
AP003559.1-201ENST00000540906 WDR59Q6PJI9 974 aa13.49□□□□□ -0.25
AP003559.1-201ENST00000540906 NYAP1Q6ZVC0 841 aa13.49□□□□□ -0.25
AP003559.1-201ENST00000540906 REXO1L1PQ8IX06 675 aa13.49□□□□□ -0.25
AP003559.1-201ENST00000540906 GTF3C2Q8WUA4 911 aaPredicted RBP13.49□□□□□ -0.25
AP003559.1-201ENST00000540906 CRACR2AQ9BSW2 395 aa13.49□□□□□ -0.25
AP003559.1-201ENST00000540906 DMAC2Q9NW81 257 aa13.49□□□□□ -0.25
AP003559.1-201ENST00000540906 CPA4Q9UI42 421 aa13.49□□□□□ -0.25
AP003559.1-201ENST00000540906 CAPN11Q9UMQ6 739 aa13.49□□□□□ -0.25
AP003559.1-201ENST00000540906 UBE4BO95155 1302 aa13.49□□□□□ -0.25
AP003559.1-201ENST00000540906 ARHGAP6O43182 974 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 OATP04181 439 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 TCF7P36402 384 aaPredicted RBP13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 NPTX2P47972 431 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 CYP2J2P51589 502 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 NCKAP1LP55160 1127 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 XKR3Q5GH77 459 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 CELF3Q5SZQ8 465 aaKnown RBP13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 FKBP15Q5T1M5 1219 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 DPY19L2P1Q6NXN4 242 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 TAPT1Q6NXT6 567 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 METTL7BQ6UX53 244 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 MAMDC4Q6UXC1 1216 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 HAUS6Q7Z4H7 955 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 GPR142Q7Z601 462 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 CNGA4Q8IV77 575 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 PCMTD1Q96MG8 357 aaPredicted RBP13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 GPR20Q99678 358 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 KATNBL1Q9H079 304 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 FAM207AQ9NSI2 230 aaPredicted RBP13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 PCDHB13Q9Y5F0 798 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 NOL4O94818 638 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 GNA14O95837 355 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 TPM2P07951 284 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 MAPTP10636 758 aaKnown RBP13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 GCLCP48506 637 aaPredicted RBP13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 ZNF157P51786 506 aaPredicted RBP13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 KCNH2Q12809 1159 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 TRIM14Q14142 442 aa13.48□□□□□ -0.25
AP003559.1-201ENST00000540906 NEDD9Q14511 834 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms