RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 FERMT3Q86UX7 667 aa10.33□□□□□ -0.76
SNHG1-215ENST00000540904 C4orf32Q8N8J7 132 aa10.33□□□□□ -0.76
SNHG1-215ENST00000540904 ZNF579Q8NAF0 562 aaKnown RBP10.33□□□□□ -0.76
SNHG1-215ENST00000540904 NEK9Q8TD19 979 aa10.33□□□□□ -0.76
SNHG1-215ENST00000540904 APBB2Q92870 758 aa10.33□□□□□ -0.76
SNHG1-215ENST00000540904 TIFAQ96CG3 184 aa10.33□□□□□ -0.76
SNHG1-215ENST00000540904 HSD17B14Q9BPX1 270 aa10.33□□□□□ -0.76
SNHG1-215ENST00000540904 AGO3Q9H9G7 860 aaKnown RBP10.33□□□□□ -0.76
SNHG1-215ENST00000540904 CDHR5Q9HBB8 845 aa10.33□□□□□ -0.76
SNHG1-215ENST00000540904 CYP26B1Q9NR63 512 aa10.33□□□□□ -0.76
SNHG1-215ENST00000540904 MSRAQ9UJ68 235 aa10.33□□□□□ -0.76
SNHG1-215ENST00000540904 TRIP12Q14669 1992 aaPredicted RBP10.33□□□□□ -0.76
SNHG1-215ENST00000540904 GPR32O75388 356 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 MYOGP15173 224 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 CRYBB1P53674 252 aaPredicted RBP10.32□□□□□ -0.76
SNHG1-215ENST00000540904 POLGP54098 1239 aaPredicted RBP10.32□□□□□ -0.76
SNHG1-215ENST00000540904 NLRP11P59045 1033 aaKnown RBP10.32□□□□□ -0.76
SNHG1-215ENST00000540904 PAK2Q13177 524 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 DRP2Q13474 957 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 RAB30Q15771 203 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 XKR9Q5GH70 373 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 FAM117BQ6P1L5 589 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 BRAPQ7Z569 592 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 HERC6Q8IVU3 1022 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 MYOCDQ8IZQ8 938 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 LINC01465Q8N7H1 131 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 USP38Q8NB14 1042 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 ERMNQ8TAM6 284 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 PHOSPHO2Q8TCD6 241 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 TMEM40Q8WWA1 233 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 SLC7A3Q8WY07 619 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 ZNF668Q96K58 619 aaPredicted RBP10.32□□□□□ -0.76
SNHG1-215ENST00000540904 SCLT1Q96NL6 688 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 CEP89Q96ST8 783 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 OSMRQ99650 979 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 ZBED2Q9BTP6 218 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 NKX2-4Q9H2Z4 354 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.32□□□□□ -0.76
SNHG1-215ENST00000540904 BMP2KQ9NSY1 1161 aaPredicted RBP10.32□□□□□ -0.76
SNHG1-215ENST00000540904 YBX2Q9Y2T7 364 aaKnown RBP10.32□□□□□ -0.76
SNHG1-215ENST00000540904 KDM3AQ9Y4C1 1321 aa10.32□□□□□ -0.76
SNHG1-215ENST00000540904 A0A087WWV3 80 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 IGKV6-21A0A0C4DH24 114 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 LAD1O00515 517 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 TLL1O43897 1013 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 MAFO75444 373 aaPredicted RBP10.31□□□□□ -0.76
SNHG1-215ENST00000540904 MED24O75448 989 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 LYPLA2O95372 231 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 AMHP03971 560 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 SPATA31C1P0DKV0 1188 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 DNM2P50570 870 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 NFX1Q12986 1120 aaKnown RBP10.31□□□□□ -0.76
SNHG1-215ENST00000540904 DTHD1Q6ZMT9 781 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 CATSPER3Q86XQ3 398 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 SPRYD3Q8NCJ5 442 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 PIGOQ8TEQ8 1089 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 NLRP7Q8WX94 980 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 JPH2Q9BR39 696 aaPredicted RBP10.31□□□□□ -0.76
SNHG1-215ENST00000540904 RAB34Q9BZG1 259 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 TTYH1Q9H313 450 aaPredicted RBP10.31□□□□□ -0.76
SNHG1-215ENST00000540904 TUFT1Q9NNX1 390 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 SUCLA2Q9P2R7 463 aaPredicted RBP10.31□□□□□ -0.76
SNHG1-215ENST00000540904 LRWD1Q9UFC0 647 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 PADI3Q9ULW8 664 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 NOC2LQ9Y3T9 749 aaKnown RBP10.31□□□□□ -0.76
SNHG1-215ENST00000540904 PCDHA11Q9Y5I1 949 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 SQORQ9Y6N5 450 aa10.31□□□□□ -0.76
SNHG1-215ENST00000540904 TMEM265A0A087WTH1 108 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.3□□□□□ -0.76
SNHG1-215ENST00000540904 RPS6KA5O75582 802 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 UPP2O95045 317 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 CA3P07451 260 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 RPA1P27694 616 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 CCT6AP40227 531 aaKnown RBP10.3□□□□□ -0.76
SNHG1-215ENST00000540904 RFC5P40937 340 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 PRPHP41219 470 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 GPC3P51654 580 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 ATP2C1P98194 919 aaPredicted RBP10.3□□□□□ -0.76
SNHG1-215ENST00000540904 PDIA5Q14554 519 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 IL17AQ16552 155 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 PPP2R2DQ66LE6 453 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 HAUS3Q68CZ6 603 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 POTEGQ6S5H5 508 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 RHPN2Q8IUC4 686 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 EXOC8Q8IYI6 725 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 ZNF710Q8N1W2 664 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 IGSF22Q8N9C0 903 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 TMEM143Q96AN5 459 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 NLRP4Q96MN2 994 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 CCDC43Q96MW1 224 aaKnown RBP10.3□□□□□ -0.76
SNHG1-215ENST00000540904 POLR3CQ9BUI4 534 aaPredicted RBP10.3□□□□□ -0.76
SNHG1-215ENST00000540904 ADAMTS10Q9H324 1103 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 SEMA6BQ9H3T3 888 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 ZNF576Q9H609 170 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 DHX33Q9H6R0 707 aaKnown RBP10.3□□□□□ -0.76
SNHG1-215ENST00000540904 SLC28A3Q9HAS3 691 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 ANKEF1Q9NU02 776 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 MTMR10Q9NXD2 777 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 MTMR6Q9Y217 621 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 PPME1Q9Y570 386 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms