RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 SNX21Q969T3 373 aa18.93■□□□□ 0.62
CD9-209ENST00000540891 ZNF576Q9H609 170 aa18.93■□□□□ 0.62
CD9-209ENST00000540891 ZSWIM4Q9H7M6 989 aa18.93■□□□□ 0.62
CD9-209ENST00000540891 SUGCTQ9HAC7 445 aa18.93■□□□□ 0.62
CD9-209ENST00000540891 CYP26B1Q9NR63 512 aa18.93■□□□□ 0.62
CD9-209ENST00000540891 GINS2Q9Y248 185 aa18.93■□□□□ 0.62
CD9-209ENST00000540891 MAFO75444 373 aaPredicted RBP18.92■□□□□ 0.62
CD9-209ENST00000540891 LYPLA2O95372 231 aa18.92■□□□□ 0.62
CD9-209ENST00000540891 GJB5O95377 273 aa18.92■□□□□ 0.62
CD9-209ENST00000540891 YWHABP31946 246 aaKnown RBP18.92■□□□□ 0.62
CD9-209ENST00000540891 TECP42680 631 aa18.92■□□□□ 0.62
CD9-209ENST00000540891 GRIN2CQ14957 1233 aa18.92■□□□□ 0.62
CD9-209ENST00000540891 KIZQ2M2Z5 673 aa18.92■□□□□ 0.62
CD9-209ENST00000540891 TPH2Q8IWU9 490 aa18.92■□□□□ 0.62
CD9-209ENST00000540891 NEK9Q8TD19 979 aa18.92■□□□□ 0.62
CD9-209ENST00000540891 INTS4Q96HW7 963 aaKnown RBP18.92■□□□□ 0.62
CD9-209ENST00000540891 OSMRQ99650 979 aa18.92■□□□□ 0.62
CD9-209ENST00000540891 ADAMTS10Q9H324 1103 aa18.92■□□□□ 0.62
CD9-209ENST00000540891 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.92■□□□□ 0.62
CD9-209ENST00000540891 PADI3Q9ULW8 664 aa18.92■□□□□ 0.62
CD9-209ENST00000540891 NOC2LQ9Y3T9 749 aaKnown RBP18.92■□□□□ 0.62
CD9-209ENST00000540891 LCHNA4D1U4 455 aa18.91■□□□□ 0.62
CD9-209ENST00000540891 AMHP03971 560 aa18.91■□□□□ 0.62
CD9-209ENST00000540891 CA3P07451 260 aa18.91■□□□□ 0.62
CD9-209ENST00000540891 SPATA31C1P0DKV0 1188 aa18.91■□□□□ 0.62
CD9-209ENST00000540891 TMOD1P28289 359 aa18.91■□□□□ 0.62
CD9-209ENST00000540891 CRYBB1P53674 252 aaPredicted RBP18.91■□□□□ 0.62
CD9-209ENST00000540891 PTGDRQ13258 359 aa18.91■□□□□ 0.62
CD9-209ENST00000540891 TMEM266Q2M3C6 531 aa18.91■□□□□ 0.62
CD9-209ENST00000540891 RTN4RL1Q86UN2 441 aaPredicted RBP18.91■□□□□ 0.62
CD9-209ENST00000540891 MYOCDQ8IZQ8 938 aa18.91■□□□□ 0.62
CD9-209ENST00000540891 CEP170P1Q96L14 293 aa18.91■□□□□ 0.62
CD9-209ENST00000540891 MAP7D2Q96T17 732 aa18.91■□□□□ 0.62
CD9-209ENST00000540891 CDX2Q99626 313 aaPredicted RBP18.91■□□□□ 0.62
CD9-209ENST00000540891 TMX1Q9H3N1 280 aa18.91■□□□□ 0.62
CD9-209ENST00000540891 ERVK-5Q9HDB9 667 aa18.91■□□□□ 0.62
CD9-209ENST00000540891 AKT3Q9Y243 479 aa18.91■□□□□ 0.62
CD9-209ENST00000540891 LOXHD1Q8IVV2 1947 aa18.9■□□□□ 0.62
CD9-209ENST00000540891 ENPP3O14638 875 aa18.9■□□□□ 0.62
CD9-209ENST00000540891 TLL1O43897 1013 aa18.9■□□□□ 0.62
CD9-209ENST00000540891 FXR2P51116 673 aaKnown RBP eCLIP18.9■□□□□ 0.62
CD9-209ENST00000540891 GPC3P51654 580 aa18.9■□□□□ 0.62
CD9-209ENST00000540891 NLRP11P59045 1033 aaKnown RBP18.9■□□□□ 0.62
CD9-209ENST00000540891 IL17AQ16552 155 aa18.9■□□□□ 0.62
CD9-209ENST00000540891 RILPL1Q5EBL4 403 aa18.9■□□□□ 0.62
CD9-209ENST00000540891 FAM117BQ6P1L5 589 aa18.9■□□□□ 0.62
CD9-209ENST00000540891 TOP1MTQ969P6 601 aa18.9■□□□□ 0.62
CD9-209ENST00000540891 ZNF668Q96K58 619 aaPredicted RBP18.9■□□□□ 0.62
CD9-209ENST00000540891 DHX33Q9H6R0 707 aaKnown RBP18.9■□□□□ 0.62
CD9-209ENST00000540891 SLC28A3Q9HAS3 691 aa18.9■□□□□ 0.62
CD9-209ENST00000540891 MED24O75448 989 aa18.89■□□□□ 0.61
CD9-209ENST00000540891 PAK2Q13177 524 aa18.89■□□□□ 0.61
CD9-209ENST00000540891 PPP2R2DQ66LE6 453 aa18.89■□□□□ 0.61
CD9-209ENST00000540891 FAM228AQ86W67 206 aa18.89■□□□□ 0.61
CD9-209ENST00000540891 CATSPER3Q86XQ3 398 aa18.89■□□□□ 0.61
CD9-209ENST00000540891 FOXD4L1Q9NU39 408 aa18.89■□□□□ 0.61
CD9-209ENST00000540891 PPME1Q9Y570 386 aa18.89■□□□□ 0.61
CD9-209ENST00000540891 CHD9Q3L8U1 2897 aa18.89■□□□□ 0.61
CD9-209ENST00000540891 A0A087WWV3 80 aa18.88■□□□□ 0.61
CD9-209ENST00000540891 MGEA5O60502 916 aa18.88■□□□□ 0.61
CD9-209ENST00000540891 RPS6KA5O75582 802 aa18.88■□□□□ 0.61
CD9-209ENST00000540891 HTRA4P83105 476 aaPredicted RBP18.88■□□□□ 0.61
CD9-209ENST00000540891 TAP1Q03518 808 aa18.88■□□□□ 0.61
CD9-209ENST00000540891 XKR9Q5GH70 373 aa18.88■□□□□ 0.61
CD9-209ENST00000540891 OTUD6AQ7L8S5 288 aa18.88■□□□□ 0.61
CD9-209ENST00000540891 SPRED2Q7Z698 418 aa18.88■□□□□ 0.61
CD9-209ENST00000540891 MYLIPQ8WY64 445 aa18.88■□□□□ 0.61
CD9-209ENST00000540891 RAD9AQ99638 391 aa18.88■□□□□ 0.61
CD9-209ENST00000540891 ZBED2Q9BTP6 218 aa18.88■□□□□ 0.61
CD9-209ENST00000540891 POLR3CQ9BUI4 534 aaPredicted RBP18.88■□□□□ 0.61
CD9-209ENST00000540891 TUFT1Q9NNX1 390 aa18.88■□□□□ 0.61
CD9-209ENST00000540891 BMP2KQ9NSY1 1161 aaPredicted RBP18.88■□□□□ 0.61
CD9-209ENST00000540891 ST3GAL5Q9UNP4 418 aa18.88■□□□□ 0.61
CD9-209ENST00000540891 ARID2Q68CP9 1835 aa18.88■□□□□ 0.61
CD9-209ENST00000540891 SYT1P21579 422 aa18.87■□□□□ 0.61
CD9-209ENST00000540891 RFC5P40937 340 aa18.87■□□□□ 0.61
CD9-209ENST00000540891 RARRES1P49788 294 aa18.87■□□□□ 0.61
CD9-209ENST00000540891 POLGP54098 1239 aaPredicted RBP18.87■□□□□ 0.61
CD9-209ENST00000540891 ATP2C1P98194 919 aaPredicted RBP18.87■□□□□ 0.61
CD9-209ENST00000540891 NFX1Q12986 1120 aaKnown RBP18.87■□□□□ 0.61
CD9-209ENST00000540891 CRIPAKQ8N1N5 446 aa18.87■□□□□ 0.61
CD9-209ENST00000540891 ZNF710Q8N1W2 664 aa18.87■□□□□ 0.61
CD9-209ENST00000540891 IGSF22Q8N9C0 903 aa18.87■□□□□ 0.61
CD9-209ENST00000540891 PIGOQ8TEQ8 1089 aa18.87■□□□□ 0.61
CD9-209ENST00000540891 SLC7A3Q8WY07 619 aa18.87■□□□□ 0.61
CD9-209ENST00000540891 JPH2Q9BR39 696 aaPredicted RBP18.87■□□□□ 0.61
CD9-209ENST00000540891 FTHL17Q9BXU8 183 aa18.87■□□□□ 0.61
CD9-209ENST00000540891 TSPYL2Q9H2G4 693 aaPredicted RBP18.87■□□□□ 0.61
CD9-209ENST00000540891 XPNPEP1Q9NQW7 623 aa18.87■□□□□ 0.61
CD9-209ENST00000540891 ANKEF1Q9NU02 776 aa18.87■□□□□ 0.61
CD9-209ENST00000540891 SUCLA2Q9P2R7 463 aaPredicted RBP18.87■□□□□ 0.61
CD9-209ENST00000540891 STXBP5LQ9Y2K9 1186 aa18.87■□□□□ 0.61
CD9-209ENST00000540891 VPS37CA5D8V6 355 aaPredicted RBP18.86■□□□□ 0.61
CD9-209ENST00000540891 LAD1O00515 517 aa18.86■□□□□ 0.61
CD9-209ENST00000540891 GPR182O15218 404 aa18.86■□□□□ 0.61
CD9-209ENST00000540891 UPP2O95045 317 aa18.86■□□□□ 0.61
CD9-209ENST00000540891 DARSP14868 501 aaKnown RBP18.86■□□□□ 0.61
CD9-209ENST00000540891 PDCP20941 246 aa18.86■□□□□ 0.61
CD9-209ENST00000540891 EIF4BP23588 611 aaKnown RBP18.86■□□□□ 0.61
CD9-209ENST00000540891 RPA1P27694 616 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms