RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 PHF20L1A8MW92 1017 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 ZBTB39O15060 712 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 MOCS3O95396 460 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 PRLRP16471 622 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 INPP5BP32019 993 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 CIAPIN1Q6FI81 312 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 DPY19L2P1Q6NXN4 242 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 WDR93Q6P2C0 686 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 SUGP1Q8IWZ8 645 aaKnown RBP12.38□□□□□ -0.43
LGR5-203ENST00000540815 ALS2CR12Q96Q35 445 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 MXRA8Q9BRK3 442 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 ZNF341Q9BYN7 854 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 GBP3Q9H0R5 595 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 SEL1LQ9UBV2 794 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 CCPG1Q9ULG6 757 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 SNX12Q9UMY4 172 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 ZNF536O15090 1300 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 SKAP2O75563 359 aaPredicted RBP12.38□□□□□ -0.43
LGR5-203ENST00000540815 AKAP3O75969 853 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 EPB41P11171 864 aaKnown RBP12.38□□□□□ -0.43
LGR5-203ENST00000540815 XRCC5P13010 732 aaKnown RBP12.38□□□□□ -0.43
LGR5-203ENST00000540815 USP14P54578 494 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 GHRHRQ02643 423 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 DGKZQ13574 1117 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 RNF10Q8N5U6 811 aaKnown RBP12.38□□□□□ -0.43
LGR5-203ENST00000540815 RIT2Q99578 217 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 DONSONQ9NYP3 566 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 WRAP73Q9P2S5 460 aaPredicted RBP12.38□□□□□ -0.43
LGR5-203ENST00000540815 WDR46O15213 610 aaKnown RBP12.38□□□□□ -0.43
LGR5-203ENST00000540815 RPS6KA5O75582 802 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 BCRP11274 1271 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 ZNF131P52739 623 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 ASIC2Q16515 512 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 MYCT1Q8N699 235 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 NEK9Q8TD19 979 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 TEPSINQ96N21 525 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 PARVGQ9HBI0 331 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 LUC7LQ9NQ29 371 aaKnown RBP12.38□□□□□ -0.43
LGR5-203ENST00000540815 JADE2Q9NQC1 790 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 ODF2LQ9ULJ1 636 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 ZMYM2Q9UBW7 1377 aa12.38□□□□□ -0.43
LGR5-203ENST00000540815 MYH10P35580 1976 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 MYH11P35749 1972 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 IPO5O00410 1097 aaKnown RBP12.37□□□□□ -0.43
LGR5-203ENST00000540815 TGFB1I1O43294 461 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 BAG6P46379 1132 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 IRAK1P51617 712 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 RAPGEF1Q13905 1077 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 MAP9Q49MG5 647 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 NIPA1Q7RTP0 329 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 PRPF38AQ8NAV1 312 aaKnown RBP12.37□□□□□ -0.43
LGR5-203ENST00000540815 LPAR1Q92633 364 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 GINM1Q9NU53 330 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 PIM2Q9P1W9 311 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 COL20A1Q9P218 1284 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 BRCA1P38398 1863 aaKnown RBP12.37□□□□□ -0.43
LGR5-203ENST00000540815 SFI1A8K8P3 1242 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 H0YHG0 523 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 RASSF7Q02833 373 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 KCNA1Q09470 495 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 SF3A3Q12874 501 aaKnown RBP eCLIP12.37□□□□□ -0.433e-7■□□□□ 8.6
LGR5-203ENST00000540815 RASA3Q14644 834 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 SLC18A3Q16572 532 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 IQCEQ6IPM2 695 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 ZNF572Q7Z3I7 529 aaPredicted RBP12.37□□□□□ -0.43
LGR5-203ENST00000540815 MCF2L2Q86YR7 1114 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 MSL3Q8N5Y2 521 aaKnown RBP12.37□□□□□ -0.43
LGR5-203ENST00000540815 CAGE1Q8TC20 777 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 CLEC4DQ8WXI8 215 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 HOOK2Q96ED9 719 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 IKZF4Q9H2S9 585 aa12.37□□□□□ -0.43
LGR5-203ENST00000540815 ASTN2O75129 1339 aaPredicted RBP12.36□□□□□ -0.43
LGR5-203ENST00000540815 TARSL2A2RTX5 802 aaKnown RBP12.36□□□□□ -0.43
LGR5-203ENST00000540815 ZNF185O15231 689 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 PAX7P23759 505 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 MCM3P25205 808 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 PON1P27169 355 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 NMT1P30419 496 aaKnown RBP12.36□□□□□ -0.43
LGR5-203ENST00000540815 CASP4P49662 377 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 ATP1A2P50993 1020 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 ZNF280AP59817 542 aaPredicted RBP12.36□□□□□ -0.43
LGR5-203ENST00000540815 TGFB2P61812 414 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 EXOC3L4Q17RC7 722 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 KLHDC7AQ5VTJ3 777 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 KCTD16Q68DU8 428 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 STXBP4Q6ZWJ1 553 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 BORCS6Q96GS4 357 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 NOX5Q96PH1 765 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 FIZ1Q96SL8 496 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 LXNQ9BS40 222 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 FAM107BQ9H098 131 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 KIAA1683Q9H0B3 1180 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 FBXL5Q9UKA1 691 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 GTPBP10A4D1E9 387 aaKnown RBP12.36□□□□□ -0.43
LGR5-203ENST00000540815 NFKBIEO00221 500 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 PDE2AO00408 941 aaPredicted RBP12.36□□□□□ -0.43
LGR5-203ENST00000540815 EBAG9O00559 213 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 CLIC2O15247 247 aa12.36□□□□□ -0.43
LGR5-203ENST00000540815 ZEB2O60315 1214 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms