RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 HSPA4P34932 840 aa18.4■□□□□ 0.54
TRIM65-203ENST00000540812 NRIP1P48552 1158 aa18.4■□□□□ 0.54
TRIM65-203ENST00000540812 CLCN3P51790 818 aa18.4■□□□□ 0.54
TRIM65-203ENST00000540812 DSC3Q14574 896 aa18.4■□□□□ 0.54
TRIM65-203ENST00000540812 NTRK3Q16288 839 aa18.4■□□□□ 0.54
TRIM65-203ENST00000540812 SPOUT1Q5T280 376 aaKnown RBP18.4■□□□□ 0.54
TRIM65-203ENST00000540812 SLC24A5Q71RS6 500 aa18.4■□□□□ 0.54
TRIM65-203ENST00000540812 RBM23Q86U06 439 aaKnown RBP18.4■□□□□ 0.54
TRIM65-203ENST00000540812 EFHBQ8N7U6 833 aa18.4■□□□□ 0.54
TRIM65-203ENST00000540812 PPP2R3CQ969Q6 453 aa18.4■□□□□ 0.54
TRIM65-203ENST00000540812 PCDHA10Q9Y5I2 948 aa18.4■□□□□ 0.54
TRIM65-203ENST00000540812 PIEZO1Q92508 2521 aa18.4■□□□□ 0.54
TRIM65-203ENST00000540812 FNDC1Q4ZHG4 1894 aaPredicted RBP18.39■□□□□ 0.54
TRIM65-203ENST00000540812 EYA4O95677 639 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 GLP2RO95838 553 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 FGFR1P11362 822 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 RPS6KB1P23443 525 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 GNA11P29992 359 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 FAM189BP81408 668 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 ERICH6BQ5W0A0 696 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 MCTP2Q6DN12 878 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 LINC01465Q8N7H1 131 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 SLC26A6Q9BXS9 759 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 AGXT2Q9BYV1 514 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 TYW1Q9NV66 732 aaKnown RBP18.39■□□□□ 0.53
TRIM65-203ENST00000540812 VPS54Q9P1Q0 977 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 TCEAL9Q9UHQ7 104 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 MUTYHQ9UIF7 546 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 BARX2Q9UMQ3 279 aaPredicted RBP18.39■□□□□ 0.53
TRIM65-203ENST00000540812 PCDHB12Q9Y5F1 795 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 PLXNA4Q9HCM2 1894 aa18.39■□□□□ 0.53
TRIM65-203ENST00000540812 ZNF862O60290 1169 aa18.38■□□□□ 0.53
TRIM65-203ENST00000540812 RBM10P98175 930 aaKnown RBP18.38■□□□□ 0.53
TRIM65-203ENST00000540812 AKAP17AQ02040 695 aaKnown RBP18.38■□□□□ 0.53
TRIM65-203ENST00000540812 CSPP1Q1MSJ5 1256 aa18.38■□□□□ 0.53
TRIM65-203ENST00000540812 ODR4Q5SWX8 454 aa18.38■□□□□ 0.53
TRIM65-203ENST00000540812 FBXL16Q8N461 479 aa18.38■□□□□ 0.53
TRIM65-203ENST00000540812 LRRC71Q8N4P6 559 aa18.38■□□□□ 0.53
TRIM65-203ENST00000540812 COLGALT1Q8NBJ5 622 aa18.38■□□□□ 0.53
TRIM65-203ENST00000540812 SMRP1Q8NCR6 262 aa18.38■□□□□ 0.53
TRIM65-203ENST00000540812 ZNF668Q96K58 619 aaPredicted RBP18.38■□□□□ 0.53
TRIM65-203ENST00000540812 POP1Q99575 1024 aaKnown RBP18.38■□□□□ 0.53
TRIM65-203ENST00000540812 CWH43Q9H720 699 aa18.38■□□□□ 0.53
TRIM65-203ENST00000540812 ATP6V0A4Q9HBG4 840 aa18.38■□□□□ 0.53
TRIM65-203ENST00000540812 NCOA5Q9HCD5 579 aaKnown RBP18.38■□□□□ 0.53
TRIM65-203ENST00000540812 RNF19AQ9NV58 838 aa18.38■□□□□ 0.53
TRIM65-203ENST00000540812 CEP131Q9UPN4 1083 aa18.38■□□□□ 0.53
TRIM65-203ENST00000540812 MYH9P35579 1960 aaKnown RBP18.38■□□□□ 0.53
TRIM65-203ENST00000540812 WDR64B1ANS9 1081 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 PER2O15055 1255 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 MSH4O15457 936 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 FGF18O76093 207 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 NLRP11P59045 1033 aaKnown RBP18.37■□□□□ 0.53
TRIM65-203ENST00000540812 ERVFC1P60507 584 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 CCT2P78371 535 aaKnown RBP18.37■□□□□ 0.53
TRIM65-203ENST00000540812 COASYQ13057 564 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 UGCGQ16739 394 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 EFCAB12Q6NXP0 572 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 FAM43BQ6ZT52 329 aaPredicted RBP18.37■□□□□ 0.53
TRIM65-203ENST00000540812 RNF135Q8IUD6 432 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 VN1R2Q8NFZ6 395 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 BICD2Q8TD16 824 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 MICAL1Q8TDZ2 1067 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 GJA10Q969M2 543 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 CCDC136Q96JN2 1154 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 FAM167AQ96KS9 214 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 RNF26Q9BY78 433 aaPredicted RBP18.37■□□□□ 0.53
TRIM65-203ENST00000540812 UPF3BQ9BZI7 483 aaKnown RBP18.37■□□□□ 0.53
TRIM65-203ENST00000540812 ADAMTS10Q9H324 1103 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 TLE6Q9H808 572 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 AAASQ9NRG9 546 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 DISC1Q9NRI5 854 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 TMEM161AQ9NX61 479 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 AKT3Q9Y243 479 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 SAMM50Q9Y512 469 aa18.37■□□□□ 0.53
TRIM65-203ENST00000540812 MAGEB2O15479 319 aa18.36■□□□□ 0.53
TRIM65-203ENST00000540812 CHMP2AO43633 222 aa18.36■□□□□ 0.53
TRIM65-203ENST00000540812 OATP04181 439 aa18.36■□□□□ 0.53
TRIM65-203ENST00000540812 IFNAR1P17181 557 aa18.36■□□□□ 0.53
TRIM65-203ENST00000540812 PDIA3P30101 505 aaKnown RBP18.36■□□□□ 0.53
TRIM65-203ENST00000540812 PRKCEQ02156 737 aa18.36■□□□□ 0.53
TRIM65-203ENST00000540812 UBE3AQ05086 875 aa18.36■□□□□ 0.53
TRIM65-203ENST00000540812 LRRC55Q6ZSA7 311 aa18.36■□□□□ 0.53
TRIM65-203ENST00000540812 THNSL1Q8IYQ7 743 aa18.36■□□□□ 0.53
TRIM65-203ENST00000540812 CCDC148Q8NFR7 591 aa18.36■□□□□ 0.53
TRIM65-203ENST00000540812 MAP7D2Q96T17 732 aa18.36■□□□□ 0.53
TRIM65-203ENST00000540812 ELAC1Q9H777 363 aaKnown RBP18.36■□□□□ 0.53
TRIM65-203ENST00000540812 TLR9Q9NR96 1032 aa18.36■□□□□ 0.53
TRIM65-203ENST00000540812 RNF216Q9NWF9 866 aaPredicted RBP18.36■□□□□ 0.53
TRIM65-203ENST00000540812 FSCN2O14926 492 aa18.35■□□□□ 0.53
TRIM65-203ENST00000540812 HERC4Q5GLZ8 1057 aaPredicted RBP18.35■□□□□ 0.53
TRIM65-203ENST00000540812 HFE2Q6ZVN8 426 aa18.35■□□□□ 0.53
TRIM65-203ENST00000540812 SLC5A5Q92911 643 aa18.35■□□□□ 0.53
TRIM65-203ENST00000540812 CASD1Q96PB1 797 aa18.35■□□□□ 0.53
TRIM65-203ENST00000540812 UNC45AQ9H3U1 944 aa18.35■□□□□ 0.53
TRIM65-203ENST00000540812 USP15Q9Y4E8 981 aaPredicted RBP18.35■□□□□ 0.53
TRIM65-203ENST00000540812 TECTAO75443 2155 aa18.34■□□□□ 0.53
TRIM65-203ENST00000540812 GAS7O60861 476 aa18.34■□□□□ 0.53
TRIM65-203ENST00000540812 TMOD1P28289 359 aa18.34■□□□□ 0.53
TRIM65-203ENST00000540812 EVCP57679 992 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms