RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	USO1	O60763	962 aa	Known RBP	6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ITGBL1	O95965	494 aa	Predicted RBP	6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CCDC172	P0C7W6	258 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	POTEI	P0CG38	1075 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	POTEJ	P0CG39	1038 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PAFAH1B1	P43034	410 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	EPHB4	P54760	987 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ZBED6	P86452	979 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	FUT2	Q10981	343 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MEA1	Q16626	185 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CATSPERG	Q6ZRH7	1159 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	B4GALNT4	Q76KP1	1039 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SRBD1	Q8N5C6	995 aa	Known RBP	6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ARRDC4	Q8NCT1	418 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	GIMAP7	Q8NHV1	300 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	LRRC15	Q8TF66	581 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ATG4C	Q96DT6	458 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CALML4	Q96GE6	196 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CCT8L2	Q96SF2	557 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	DUSP9	Q99956	384 aa	Known RBP	6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SPATC1L	Q9H0A9	340 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	RMND1	Q9NWS8	449 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ARHGAP20	Q9P2F6	1191 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PRR12	Q9ULL5	1215 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	LAMB2	P55268	1798 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783		A0A1W2PQC6	194 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ANO9	A1A5B4	782 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	KBTBD13	C9JR72	458 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	HEXIM1	O94992	359 aa	Known RBP	6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	FTCD	O95954	541 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	EGFR	P00533	1210 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ICAM1	P05362	532 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PDHB	P11177	359 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	HOXA7	P31268	230 aa	Predicted RBP	6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	RDX	P35241	583 aa	Known RBP	6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SLC16A2	P36021	539 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MAGEA1	P43355	309 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	GFPT1	Q06210	699 aa	Predicted RBP	6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	STK4	Q13043	487 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TTLL4	Q14679	1199 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	E2F5	Q15329	346 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SEC23A	Q15436	765 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SPRED3	Q2MJR0	410 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	NAALADL2	Q58DX5	795 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	FAM160B1	Q5W0V3	765 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	RRAGA	Q7L523	313 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CTU1	Q7Z7A3	348 aa	Known RBP	6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	KLHL7	Q8IXQ5	586 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	EXOC8	Q8IYI6	725 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CCDC155	Q8N6L0	562 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	KRT12	Q99456	494 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TMEM60	Q9H2L4	133 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	AFG3L2	Q9Y4W6	797 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SPEF2	Q9C093	1822 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SNED1	Q8TER0	1413 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	BTBD19	C9JJ37	291 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	STAM2	O75886	525 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	NR1D1	P20393	614 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	EEF1G	P26641	437 aa	Known RBP	6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	KIF11	P52732	1056 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ERVK-9	P63128	1117 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SLC9C1	Q4G0N8	1177 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CEP85L	Q5SZL2	805 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TTI2	Q6NXR4	508 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	NLRP14	Q86W24	1093 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TRIM58	Q8NG06	486 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TNFRSF25	Q93038	417 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TTYH3	Q9C0H2	523 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CEP83	Q9Y592	693 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783		M0QZ92	97 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TLR3	O15455	904 aa	Known RBP	6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CLSTN1	O94985	981 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CYP2B6	P20813	491 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TMOD1	P28289	359 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	UBA7	P41226	1012 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	VEGFB	P49765	207 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SKOR1	P84550	965 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ARID5A	Q03989	594 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PTGIS	Q16647	500 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	QRICH1	Q2TAL8	776 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CCDC40	Q4G0X9	1142 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ALS2CL	Q60I27	953 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	RSPH3	Q86UC2	560 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	DNAAF5	Q86Y56	855 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CCDC13	Q8IYE1	715 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	BLID	Q8IZY5	108 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SLAIN1	Q8ND83	568 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MTMR8	Q96EF0	704 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CCDC114	Q96M63	670 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TEPSIN	Q96N21	525 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PURB	Q96QR8	312 aa	Known RBP	6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PIGS	Q96S52	555 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TLR10	Q9BXR5	811 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	EPN3	Q9H201	632 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	NLRC4	Q9NPP4	1024 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	KLC4	Q9NSK0	619 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	HYOU1	Q9Y4L1	999 aa		6.18	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TESPA1	A2RU30	521 aa	Predicted RBP	6.18	□□□□□ -1.42

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