RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 SEPT9Q9UHD8 586 aaPredicted RBP10.74□□□□□ -0.69
PHC1-208ENST00000540574 PLAAQ9Y263 795 aa10.74□□□□□ -0.69
PHC1-208ENST00000540574 GLI1P08151 1106 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 RPA1P27694 616 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 PRELPP51888 382 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 OSTNP61366 133 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 RINT1Q6NUQ1 792 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 ZNF571Q7Z3V5 609 aaPredicted RBP10.73□□□□□ -0.69
PHC1-208ENST00000540574 PASD1Q8IV76 773 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 SLC30A5Q8TAD4 765 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 IQCDQ96DY2 449 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 FAM20AQ96MK3 541 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 TRIM51Q9BSJ1 452 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 PLCB1Q9NQ66 1216 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 SIK3Q9Y2K2 1263 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 SPEF2Q9C093 1822 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 MYH7P12883 1935 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 RAD51CO43502 376 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 MXI1P50539 228 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 SLC27A3Q5K4L6 730 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 MSANTD4Q8NCY6 345 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 IPO4Q8TEX9 1081 aaKnown RBP10.73□□□□□ -0.69
PHC1-208ENST00000540574 RMDN3Q96TC7 470 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 FAM118BQ9BPY3 351 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 NYAP2Q9P242 653 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 NOVA2Q9UNW9 492 aaKnown RBP10.73□□□□□ -0.69
PHC1-208ENST00000540574 TTI1O43156 1089 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 ZBED4O75132 1171 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 FERP16591 822 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 CALCOCO2Q13137 446 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 MTMR1Q13613 665 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 LRRC55Q6ZSA7 311 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 ANKRD42Q8N9B4 389 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 ZNF653Q96CK0 615 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 TLR10Q9BXR5 811 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 ADAM33Q9BZ11 813 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 WDR11Q9BZH6 1224 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 PICK1Q9NRD5 415 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 STRCP1A6NGW2 1772 aa10.73□□□□□ -0.69
PHC1-208ENST00000540574 EP400Q96L91 3159 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 MEIS2O14770 477 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 SART1O43290 800 aaKnown RBP10.72□□□□□ -0.69
PHC1-208ENST00000540574 POTEJP0CG39 1038 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 SEPT14Q6ZU15 432 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 TTLL6Q8N841 843 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 TAOK3Q9H2K8 898 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 MLXIPLQ9NP71 852 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 NOC2LQ9Y3T9 749 aaKnown RBP10.72□□□□□ -0.69
PHC1-208ENST00000540574 ABCC6O95255 1503 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 LRP6O75581 1613 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 CALCAP01258 141 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 FAM153BP0C7A2 387 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 PON1P27169 355 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 FAM153CQ494X1 144 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 KLHDC7AQ5VTJ3 777 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 PAPD7Q5XG87 772 aaKnown RBP10.72□□□□□ -0.69
PHC1-208ENST00000540574 OTUD6AQ7L8S5 288 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 CREG2Q8IUH2 290 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 SYCE1Q8N0S2 351 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 LRRC45Q96CN5 670 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 BTBD6Q96KE9 485 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 ZIM3Q96PE6 472 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 HEMGNQ9BXL5 484 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 FAM153AQ9UHL3 310 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 RASAL2Q9UJF2 1139 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 TJP1Q07157 1748 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 ANKRD62A6NC57 917 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 NFIBO00712 420 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 EYA4O95677 639 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 IFNB1P01574 187 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 FTLP02792 175 aaPredicted RBP10.72□□□□□ -0.69
PHC1-208ENST00000540574 INPP5BP32019 993 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 IFT88Q13099 833 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 SEPT7Q16181 437 aaKnown RBP10.72□□□□□ -0.69
PHC1-208ENST00000540574 NBPF9Q3BBW0 867 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 TTC31Q49AM3 519 aaPredicted RBP10.72□□□□□ -0.69
PHC1-208ENST00000540574 UBL4BQ8N7F7 174 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 POP1Q99575 1024 aaKnown RBP10.72□□□□□ -0.69
PHC1-208ENST00000540574 SYNCQ9H7C4 482 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 DNAJC18Q9H819 358 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 LAMB4A4D0S4 1761 aa10.72□□□□□ -0.69
PHC1-208ENST00000540574 GAKO14976 1311 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 M0R2N6 131 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 KIF4AO95239 1232 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 MYCNP04198 464 aaPredicted RBP10.71□□□□□ -0.69
PHC1-208ENST00000540574 ITGA4P13612 1032 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 RDXP35241 583 aaKnown RBP10.71□□□□□ -0.69
PHC1-208ENST00000540574 RASA3Q14644 834 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 HP1BP3Q5SSJ5 553 aaPredicted RBP10.71□□□□□ -0.69
PHC1-208ENST00000540574 TRIM59Q8IWR1 403 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 SYT2Q8N9I0 419 aaPredicted RBP10.71□□□□□ -0.69
PHC1-208ENST00000540574 FAM163AQ96GL9 167 aaPredicted RBP10.71□□□□□ -0.69
PHC1-208ENST00000540574 PI4K2AQ9BTU6 479 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 KMT5AQ9NQR1 393 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 NAGPAQ9UK23 515 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 PKD1L3Q7Z443 1732 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 KRT19P08727 400 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 MARK3P27448 753 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 TMOD1P28289 359 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 KCNJ1P48048 391 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms