RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 CDC25AP30304 524 aa24.64■■□□□ 1.54
TRIM65-202ENST00000540128 RARRES1P49788 294 aa24.64■■□□□ 1.54
TRIM65-202ENST00000540128 CLCN3P51790 818 aa24.64■■□□□ 1.54
TRIM65-202ENST00000540128 PLEKHG4Q58EX7 1191 aa24.64■■□□□ 1.54
TRIM65-202ENST00000540128 FBXO47Q5MNV8 452 aa24.64■■□□□ 1.54
TRIM65-202ENST00000540128 HYIQ5T013 277 aa24.64■■□□□ 1.54
TRIM65-202ENST00000540128 FOXD4L5Q5VV16 416 aaPredicted RBP24.64■■□□□ 1.54
TRIM65-202ENST00000540128 ATL3Q6DD88 541 aa24.64■■□□□ 1.54
TRIM65-202ENST00000540128 LRRC71Q8N4P6 559 aa24.64■■□□□ 1.54
TRIM65-202ENST00000540128 KCTD17Q8N5Z5 321 aa24.64■■□□□ 1.54
TRIM65-202ENST00000540128 SNX29Q8TEQ0 813 aa24.64■■□□□ 1.54
TRIM65-202ENST00000540128 PIGOQ8TEQ8 1089 aa24.64■■□□□ 1.54
TRIM65-202ENST00000540128 FOXD4L4Q8WXT5 416 aaPredicted RBP24.64■■□□□ 1.54
TRIM65-202ENST00000540128 MAP7D2Q96T17 732 aa24.64■■□□□ 1.54
TRIM65-202ENST00000540128 SRPRBQ9Y5M8 271 aaKnown RBP24.64■■□□□ 1.54
TRIM65-202ENST00000540128 M0QZ92 97 aa24.63■■□□□ 1.53
TRIM65-202ENST00000540128 GPR32O75388 356 aa24.63■■□□□ 1.53
TRIM65-202ENST00000540128 ACTN1P12814 892 aa24.63■■□□□ 1.53
TRIM65-202ENST00000540128 LONP1P36776 959 aaKnown RBP24.63■■□□□ 1.53
TRIM65-202ENST00000540128 CDC42EP1Q00587 391 aa24.63■■□□□ 1.53
TRIM65-202ENST00000540128 LRIT3Q3SXY7 679 aa24.63■■□□□ 1.53
TRIM65-202ENST00000540128 HABP4Q5JVS0 413 aaKnown RBP24.63■■□□□ 1.53
TRIM65-202ENST00000540128 CNKSR3Q6P9H4 555 aa24.63■■□□□ 1.53
TRIM65-202ENST00000540128 POTEGQ6S5H5 508 aa24.63■■□□□ 1.53
TRIM65-202ENST00000540128 USP38Q8NB14 1042 aa24.63■■□□□ 1.53
TRIM65-202ENST00000540128 SLC7A3Q8WY07 619 aa24.63■■□□□ 1.53
TRIM65-202ENST00000540128 ADAMTS10Q9H324 1103 aa24.63■■□□□ 1.53
TRIM65-202ENST00000540128 FBXO2Q9UK22 296 aaPredicted RBP24.63■■□□□ 1.53
TRIM65-202ENST00000540128 A0A087WWV3 80 aa24.62■■□□□ 1.53
TRIM65-202ENST00000540128 GAS2O43903 313 aaKnown RBP24.62■■□□□ 1.53
TRIM65-202ENST00000540128 DGAT1O75907 488 aa24.62■■□□□ 1.53
TRIM65-202ENST00000540128 DDIT3P35638 169 aa24.62■■□□□ 1.53
TRIM65-202ENST00000540128 DNM2P50570 870 aa24.62■■□□□ 1.53
TRIM65-202ENST00000540128 CEBPZQ03701 1054 aaKnown RBP24.62■■□□□ 1.53
TRIM65-202ENST00000540128 TMEM62Q0P6H9 643 aa24.62■■□□□ 1.53
TRIM65-202ENST00000540128 DRP2Q13474 957 aa24.62■■□□□ 1.53
TRIM65-202ENST00000540128 LPIN1Q14693 890 aa24.62■■□□□ 1.53
TRIM65-202ENST00000540128 FAM43BQ6ZT52 329 aaPredicted RBP24.62■■□□□ 1.53
TRIM65-202ENST00000540128 LINC00301Q8NCQ3 95 aa24.62■■□□□ 1.53
TRIM65-202ENST00000540128 DBF4BQ8NFT6 615 aa24.62■■□□□ 1.53
TRIM65-202ENST00000540128 RNPC3Q96LT9 517 aaKnown RBP24.62■■□□□ 1.53
TRIM65-202ENST00000540128 KIAA1024Q9UPX6 916 aa24.62■■□□□ 1.53
TRIM65-202ENST00000540128 RANBP2P49792 3224 aaKnown RBP24.62■■□□□ 1.53
TRIM65-202ENST00000540128 BAIAP3O94812 1187 aa24.61■■□□□ 1.53
TRIM65-202ENST00000540128 VTNP04004 478 aa24.61■■□□□ 1.53
TRIM65-202ENST00000540128 MARCKSP29966 332 aaPredicted RBP24.61■■□□□ 1.53
TRIM65-202ENST00000540128 CRYBB1P53674 252 aaPredicted RBP24.61■■□□□ 1.53
TRIM65-202ENST00000540128 POLGP54098 1239 aaPredicted RBP24.61■■□□□ 1.53
TRIM65-202ENST00000540128 GRIN1Q05586 938 aa24.61■■□□□ 1.53
TRIM65-202ENST00000540128 TCTN1Q2MV58 587 aa24.61■■□□□ 1.53
TRIM65-202ENST00000540128 OTOP2Q7RTS6 562 aa24.61■■□□□ 1.53
TRIM65-202ENST00000540128 SEPT8Q92599 483 aa24.61■■□□□ 1.53
TRIM65-202ENST00000540128 MTIF3Q9H2K0 278 aaKnown RBP24.61■■□□□ 1.53
TRIM65-202ENST00000540128 CDHR5Q9HBB8 845 aa24.61■■□□□ 1.53
TRIM65-202ENST00000540128 XPNPEP1Q9NQW7 623 aa24.61■■□□□ 1.53
TRIM65-202ENST00000540128 SUCLA2Q9P2R7 463 aaPredicted RBP24.61■■□□□ 1.53
TRIM65-202ENST00000540128 TFIP11Q9UBB9 837 aaKnown RBP24.61■■□□□ 1.53
TRIM65-202ENST00000540128 AKT3Q9Y243 479 aa24.61■■□□□ 1.53
TRIM65-202ENST00000540128 ABHD14A-ACY1A0A1B0GW23 586 aa24.6■■□□□ 1.53
TRIM65-202ENST00000540128 YEATS4O95619 227 aa24.6■■□□□ 1.53
TRIM65-202ENST00000540128 EMC2Q15006 297 aa24.6■■□□□ 1.53
TRIM65-202ENST00000540128 TSHZ1Q6ZSZ6 1077 aa24.6■■□□□ 1.53
TRIM65-202ENST00000540128 PNMA5Q96PV4 448 aa24.6■■□□□ 1.53
TRIM65-202ENST00000540128 DDX19AQ9NUU7 478 aaKnown RBP24.6■■□□□ 1.53
TRIM65-202ENST00000540128 CXXC1Q9P0U4 656 aaPredicted RBP24.6■■□□□ 1.53
TRIM65-202ENST00000540128 GHRP10912 638 aa24.59■■□□□ 1.53
TRIM65-202ENST00000540128 GPC3P51654 580 aa24.59■■□□□ 1.53
TRIM65-202ENST00000540128 NLRP11P59045 1033 aaKnown RBP24.59■■□□□ 1.53
TRIM65-202ENST00000540128 TCP11Q8WWU5 503 aa24.59■■□□□ 1.53
TRIM65-202ENST00000540128 APBB2Q92870 758 aa24.59■■□□□ 1.53
TRIM65-202ENST00000540128 CCSER1Q9C0I3 900 aa24.59■■□□□ 1.53
TRIM65-202ENST00000540128 NT5C3AQ9H0P0 336 aa24.59■■□□□ 1.53
TRIM65-202ENST00000540128 AGO3Q9H9G7 860 aaKnown RBP24.59■■□□□ 1.53
TRIM65-202ENST00000540128 ATP6V0A4Q9HBG4 840 aa24.59■■□□□ 1.53
TRIM65-202ENST00000540128 DNM3Q9UQ16 869 aa24.59■■□□□ 1.53
TRIM65-202ENST00000540128 EFCAB14O75071 495 aa24.58■■□□□ 1.53
TRIM65-202ENST00000540128 PPP6R2O75170 966 aa24.58■■□□□ 1.53
TRIM65-202ENST00000540128 EYA4O95677 639 aa24.58■■□□□ 1.53
TRIM65-202ENST00000540128 UBA7P41226 1012 aa24.58■■□□□ 1.53
TRIM65-202ENST00000540128 GRB10Q13322 594 aa24.58■■□□□ 1.53
TRIM65-202ENST00000540128 IKBKEQ14164 716 aa24.58■■□□□ 1.53
TRIM65-202ENST00000540128 STK38Q15208 465 aa24.58■■□□□ 1.53
TRIM65-202ENST00000540128 KIZQ2M2Z5 673 aa24.58■■□□□ 1.53
TRIM65-202ENST00000540128 CABP7Q86V35 215 aa24.58■■□□□ 1.53
TRIM65-202ENST00000540128 KRI1Q8N9T8 703 aaKnown RBP24.58■■□□□ 1.53
TRIM65-202ENST00000540128 MTRQ99707 1265 aa24.58■■□□□ 1.53
TRIM65-202ENST00000540128 IFIH1Q9BYX4 1025 aaKnown RBP24.58■■□□□ 1.53
TRIM65-202ENST00000540128 CSRNP2Q9H175 543 aa24.58■■□□□ 1.53
TRIM65-202ENST00000540128 CFAP45Q9UL16 551 aa24.58■■□□□ 1.53
TRIM65-202ENST00000540128 SPTLC2O15270 562 aa24.57■■□□□ 1.52
TRIM65-202ENST00000540128 ASAP2O43150 1006 aa24.57■■□□□ 1.52
TRIM65-202ENST00000540128 CYP11B2P19099 503 aa24.57■■□□□ 1.52
TRIM65-202ENST00000540128 TMEM119Q4V9L6 283 aa24.57■■□□□ 1.52
TRIM65-202ENST00000540128 PADI6Q6TGC4 694 aa24.57■■□□□ 1.52
TRIM65-202ENST00000540128 ZNF410Q86VK4 478 aa24.57■■□□□ 1.52
TRIM65-202ENST00000540128 TMEM40Q8WWA1 233 aa24.57■■□□□ 1.52
TRIM65-202ENST00000540128 PRPF31Q8WWY3 499 aaKnown RBP24.57■■□□□ 1.52
TRIM65-202ENST00000540128 TMEM143Q96AN5 459 aa24.57■■□□□ 1.52
TRIM65-202ENST00000540128 CCDC43Q96MW1 224 aaKnown RBP24.57■■□□□ 1.52
TRIM65-202ENST00000540128 ARHGEF35A5YM69 484 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms