RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 PHF7Q9BWX1 381 aaPredicted RBP16.98■□□□□ 0.31
USB1-203ENST00000539737 FTHL17Q9BXU8 183 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 KCNH6Q9H252 994 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 CWH43Q9H720 699 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 AGO4Q9HCK5 861 aaKnown RBP16.98■□□□□ 0.31
USB1-203ENST00000539737 TLR9Q9NR96 1032 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 PDRG1Q9NUG6 133 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 ST3GAL5Q9UNP4 418 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 PCDHB7Q9Y5E2 793 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 PLXNA3P51805 1871 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 ZBTB42B2RXF5 422 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 H0Y858 1186 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 RPS6KA5O75582 802 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 VTNP04004 478 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 ATP4AP20648 1035 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 PTPN5P54829 565 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 EVCP57679 992 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 SYCE2Q6PIF2 218 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 LRRC55Q6ZSA7 311 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 BMP8AQ7Z5Y6 402 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 FAM228AQ86W67 206 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 KIAA0319LQ8IZA0 1049 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 UPF2Q9HAU5 1272 aaKnown RBP16.97■□□□□ 0.31
USB1-203ENST00000539737 TSHZ2Q9NRE2 1034 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 RNF19AQ9NV58 838 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 VPS13AQ96RL7 3174 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 MYO10Q9HD67 2058 aa16.97■□□□□ 0.31
USB1-203ENST00000539737 CNTNAP5Q8WYK1 1306 aa16.96■□□□□ 0.31
USB1-203ENST00000539737 SMIM35A0A1B0GVV1 85 aa16.96■□□□□ 0.31
USB1-203ENST00000539737 BACH1O14867 736 aa16.96■□□□□ 0.31
USB1-203ENST00000539737 FSCN2O14926 492 aa16.96■□□□□ 0.31
USB1-203ENST00000539737 TOB2Q14106 344 aaPredicted RBP16.96■□□□□ 0.31
USB1-203ENST00000539737 PPP2R3CQ969Q6 453 aa16.96■□□□□ 0.31
USB1-203ENST00000539737 SDF4Q9BRK5 362 aa16.96■□□□□ 0.31
USB1-203ENST00000539737 S1PR5Q9H228 398 aa16.96■□□□□ 0.31
USB1-203ENST00000539737 PTPRZ1P23471 2315 aaPredicted RBP16.95■□□□□ 0.3
USB1-203ENST00000539737 DENND3A2RUS2 1198 aa16.95■□□□□ 0.3
USB1-203ENST00000539737 C9IYK1 514 aa16.95■□□□□ 0.3
USB1-203ENST00000539737 GFRA3O60609 400 aa16.95■□□□□ 0.3
USB1-203ENST00000539737 FGFR4P22455 802 aa16.95■□□□□ 0.3
USB1-203ENST00000539737 SIGLEC14Q08ET2 396 aa16.95■□□□□ 0.3
USB1-203ENST00000539737 ANKRD1Q15327 319 aa16.95■□□□□ 0.3
USB1-203ENST00000539737 PTPN21Q16825 1174 aa16.95■□□□□ 0.3
USB1-203ENST00000539737 NAALADL2Q58DX5 795 aa16.95■□□□□ 0.3
USB1-203ENST00000539737 RNF169Q8NCN4 708 aa16.95■□□□□ 0.3
USB1-203ENST00000539737 TCF25Q9BQ70 676 aa16.95■□□□□ 0.3
USB1-203ENST00000539737 ANO3Q9BYT9 981 aa16.95■□□□□ 0.3
USB1-203ENST00000539737 PCDHB12Q9Y5F1 795 aa16.95■□□□□ 0.3
USB1-203ENST00000539737 AVPR2P30518 371 aa16.94■□□□□ 0.3
USB1-203ENST00000539737 CLCN3P51790 818 aa16.94■□□□□ 0.3
USB1-203ENST00000539737 NAPAP54920 295 aa16.94■□□□□ 0.3
USB1-203ENST00000539737 KCNC3Q14003 757 aa16.94■□□□□ 0.3
USB1-203ENST00000539737 SWSAP1Q6NVH7 229 aa16.94■□□□□ 0.3
USB1-203ENST00000539737 ANKRD54Q6NXT1 300 aa16.94■□□□□ 0.3
USB1-203ENST00000539737 PLPPR4Q7Z2D5 763 aa16.94■□□□□ 0.3
USB1-203ENST00000539737 ZBTB33Q86T24 672 aa16.94■□□□□ 0.3
USB1-203ENST00000539737 C12orf76Q8N812 135 aaPredicted RBP16.94■□□□□ 0.3
USB1-203ENST00000539737 ATOH1Q92858 354 aaPredicted RBP16.94■□□□□ 0.3
USB1-203ENST00000539737 ENTPD7Q9NQZ7 604 aa16.94■□□□□ 0.3
USB1-203ENST00000539737 RGS18Q9NS28 235 aa16.94■□□□□ 0.3
USB1-203ENST00000539737 NFASCO94856 1347 aa16.94■□□□□ 0.3
USB1-203ENST00000539737 KDM3AQ9Y4C1 1321 aa16.94■□□□□ 0.3
USB1-203ENST00000539737 RIF1Q5UIP0 2472 aaKnown RBP16.93■□□□□ 0.3
USB1-203ENST00000539737 FAM86B1E9PN63 330 aa16.93■□□□□ 0.3
USB1-203ENST00000539737 hCG_1984214I3L0E3 225 aa16.93■□□□□ 0.3
USB1-203ENST00000539737 ATG7O95352 703 aa16.93■□□□□ 0.3
USB1-203ENST00000539737 ASGR2P07307 311 aa16.93■□□□□ 0.3
USB1-203ENST00000539737 FAM86B2P0C5J1 330 aa16.93■□□□□ 0.3
USB1-203ENST00000539737 CEP55Q53EZ4 464 aa16.93■□□□□ 0.3
USB1-203ENST00000539737 JAKMIP3Q5VZ66 844 aa16.93■□□□□ 0.3
USB1-203ENST00000539737 PDXDC2PQ6P474 469 aa16.93■□□□□ 0.3
USB1-203ENST00000539737 ABHD15Q6UXT9 468 aa16.93■□□□□ 0.3
USB1-203ENST00000539737 LRRC71Q8N4P6 559 aa16.93■□□□□ 0.3
USB1-203ENST00000539737 ZNF713Q8N859 430 aaPredicted RBP16.93■□□□□ 0.3
USB1-203ENST00000539737 AUTS2Q8WXX7 1259 aa16.93■□□□□ 0.3
USB1-203ENST00000539737 ZNF274Q96GC6 653 aaPredicted RBP16.93■□□□□ 0.3
USB1-203ENST00000539737 C22orf23Q9BZE7 217 aa16.93■□□□□ 0.3
USB1-203ENST00000539737 SQORQ9Y6N5 450 aa16.93■□□□□ 0.3
USB1-203ENST00000539737 IGKV6D-21A0A0A0MT36 114 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 C2CD4DB7Z1M9 353 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 NT5C1B-RDH14C9J2C7 533 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 GPR32O75388 356 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 C22orf31O95567 290 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 PDIA3P30101 505 aaKnown RBP16.92■□□□□ 0.3
USB1-203ENST00000539737 CDC27P30260 824 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 CA8P35219 290 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 FUT2Q10981 343 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 DSC3Q14574 896 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 LONRF3Q496Y0 759 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 TEX2Q8IWB9 1127 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 METTL13Q8N6R0 699 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 KREMEN2Q8NCW0 462 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 CASD1Q96PB1 797 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 GLT8D2Q9H1C3 349 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 POMKQ9H5K3 350 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 ATP6V0A4Q9HBG4 840 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 ZNF302Q9NR11 478 aa16.92■□□□□ 0.3
USB1-203ENST00000539737 FAM217BQ9NTX9 383 aaPredicted RBP16.92■□□□□ 0.3
USB1-203ENST00000539737 MEIS1O00470 390 aa16.91■□□□□ 0.3
USB1-203ENST00000539737 DHX15O43143 795 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms