RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 DDX39AO00148 427 aaKnown RBP11.16□□□□□ -0.62
SPARC-209ENST00000539687 MAPK13O15264 365 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 RRP9O43818 475 aaKnown RBP11.16□□□□□ -0.62
SPARC-209ENST00000539687 HIP1RO75146 1068 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 EIF3JO75822 258 aaKnown RBP11.16□□□□□ -0.62
SPARC-209ENST00000539687 DDNO94850 711 aaPredicted RBP11.16□□□□□ -0.62
SPARC-209ENST00000539687 PRPF6O94906 941 aaKnown RBP11.16□□□□□ -0.62
SPARC-209ENST00000539687 CCDC172P0C7W6 258 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 OSBPP22059 807 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 ICAM3P32942 547 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 SMTNP53814 917 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 RTP1P59025 263 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 IRX3P78415 501 aaPredicted RBP11.16□□□□□ -0.62
SPARC-209ENST00000539687 ENPEPQ07075 957 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 CETN1Q12798 172 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 KIF5AQ12840 1032 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 MTF1Q14872 753 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 STXBP2Q15833 593 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 SFMBT2Q5VUG0 894 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 PDXDC1Q6P996 788 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 KCNV1Q6PIU1 500 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 GBP6Q6ZN66 633 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.16□□□□□ -0.62
SPARC-209ENST00000539687 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.16□□□□□ -0.62
SPARC-209ENST00000539687 ARMC9Q7Z3E5 817 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 PRRT2Q7Z6L0 340 aaPredicted RBP11.16□□□□□ -0.62
SPARC-209ENST00000539687 USP37Q86T82 979 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 SYCP3Q8IZU3 236 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 CEP112Q8N8E3 955 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 GLIS3Q8NEA6 775 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 MCPH1Q8NEM0 835 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 KIFAP3Q92845 792 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 ACCSQ96QU6 501 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 JPH1Q9HDC5 661 aaPredicted RBP11.16□□□□□ -0.62
SPARC-209ENST00000539687 LZTFL1Q9NQ48 299 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 A1CFQ9NQ94 594 aaKnown RBP11.16□□□□□ -0.62
SPARC-209ENST00000539687 FAM207AQ9NSI2 230 aaPredicted RBP11.16□□□□□ -0.62
SPARC-209ENST00000539687 AGPAT5Q9NUQ2 364 aa11.16□□□□□ -0.62
SPARC-209ENST00000539687 ATP8B3O60423 1300 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 SBF1O95248 1867 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 RSPH10B2B2RC85 870 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 SPATA31C2B4DYI2 1134 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 K7ENM7 598 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 IRF6O14896 467 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 AKR1B10O60218 316 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 PPP1R37O75864 691 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 LCA5LO95447 670 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 SERPING1P05155 500 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 RSPH10BP0C881 870 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 KRT13P13646 458 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 CASP5P51878 434 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 VAV2P52735 878 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 KCNH2Q12809 1159 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 PPIL2Q13356 520 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 PLS1Q14651 629 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 C10orf76Q5T2E6 689 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 WDR59Q6PJI9 974 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 RRAGAQ7L523 313 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 VPS36Q86VN1 386 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 FAM186BQ8IYM0 893 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 ANKRD35Q8N283 1001 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 ANKRD7Q92527 254 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 JAKMIP2Q96AA8 810 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 NAPGQ99747 312 aaPredicted RBP11.15□□□□□ -0.62
SPARC-209ENST00000539687 LSM14BQ9BX40 385 aaKnown RBP11.15□□□□□ -0.62
SPARC-209ENST00000539687 RIPK3Q9Y572 518 aa11.15□□□□□ -0.62
SPARC-209ENST00000539687 A0A0G2JMZ2 1700 aa11.15□□□□□ -0.63
SPARC-209ENST00000539687 PAPPA2Q9BXP8 1791 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 RLFQ13129 1914 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 ANO9A1A5B4 782 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 RASSF10A6NK89 507 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 P4HA2O15460 535 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 DGAT1O75907 488 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 TUBBP07437 444 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 HTRA3P83110 453 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 DMP1Q13316 513 aaPredicted RBP11.14□□□□□ -0.63
SPARC-209ENST00000539687 DGKZQ13574 1117 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 EXOC3L4Q17RC7 722 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 WHAMMP3Q1A5X7 153 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 XKR9Q5GH70 373 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 ZNF569Q5MCW4 686 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 CCDC122Q5T0U0 273 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 PRAMEF18Q5VWM3 479 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 C9orf131Q5VYM1 1079 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 INTS8Q75QN2 995 aaKnown RBP11.14□□□□□ -0.63
SPARC-209ENST00000539687 PNMA8AQ86V59 439 aaPredicted RBP11.14□□□□□ -0.63
SPARC-209ENST00000539687 ACRBPQ8NEB7 543 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 SPIRE2Q8WWL2 714 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 BAP1Q92560 729 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 UBXN4Q92575 508 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 EEF2KMTQ96G04 330 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 ALS2CR12Q96Q35 445 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 CHP1Q99653 195 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 STRA6Q9BX79 667 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 FGFBP2Q9BYJ0 223 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 PDCL3Q9H2J4 239 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 AGPAT3Q9NRZ7 376 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 DMAC2Q9NW81 257 aa11.14□□□□□ -0.63
SPARC-209ENST00000539687 ARGLU1Q9NWB6 273 aaPredicted RBP11.14□□□□□ -0.63
SPARC-209ENST00000539687 AIPL1Q9NZN9 384 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms