RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 HTATIP2Q9BUP3 242 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 RUSC1Q9BVN2 902 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 PANK2Q9BZ23 570 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 BHMT2Q9H2M3 363 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 POLD4Q9HCU8 107 aa14.5□□□□□ -0.09
CCDC42-202ENST00000539522 LAMA2P24043 3122 aaKnown RBP14.49□□□□□ -0.09
CCDC42-202ENST00000539522 SMIM35A0A1B0GVV1 85 aa14.49□□□□□ -0.09
CCDC42-202ENST00000539522 DCDC2CA8MYV0 355 aa14.49□□□□□ -0.09
CCDC42-202ENST00000539522 EYA4O95677 639 aa14.49□□□□□ -0.09
CCDC42-202ENST00000539522 CHRNA1P02708 482 aa14.49□□□□□ -0.09
CCDC42-202ENST00000539522 CKBP12277 381 aa14.49□□□□□ -0.09
CCDC42-202ENST00000539522 UBA7P41226 1012 aa14.49□□□□□ -0.09
CCDC42-202ENST00000539522 MAPK7Q13164 816 aa14.49□□□□□ -0.09
CCDC42-202ENST00000539522 ZRSR1Q15695 479 aaKnown RBP14.49□□□□□ -0.09
CCDC42-202ENST00000539522 XKR9Q5GH70 373 aa14.49□□□□□ -0.09
CCDC42-202ENST00000539522 ZNF618Q5T7W0 954 aa14.49□□□□□ -0.09
CCDC42-202ENST00000539522 EFCAB12Q6NXP0 572 aa14.49□□□□□ -0.09
CCDC42-202ENST00000539522 DAW1Q8N136 415 aa14.49□□□□□ -0.09
CCDC42-202ENST00000539522 PPP1R12CQ9BZL4 782 aa14.49□□□□□ -0.09
CCDC42-202ENST00000539522 GPRC5CQ9NQ84 441 aa14.49□□□□□ -0.09
CCDC42-202ENST00000539522 ZMYND8Q9ULU4 1186 aaPredicted RBP14.49□□□□□ -0.09
CCDC42-202ENST00000539522 PTPRSQ13332 1948 aa14.49□□□□□ -0.09
CCDC42-202ENST00000539522 KDM3AQ9Y4C1 1321 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 NPHP3-ACAD11A0A0J9YXS1 232 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 A0A1B0GVL5 298 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 SLC26A4O43511 780 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 TRAK2O60296 914 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 EVI5O60447 810 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 DKC1O60832 514 aaKnown RBP eCLIP14.48□□□□□ -0.09
CCDC42-202ENST00000539522 GPR32O75388 356 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 CMA1P23946 247 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 EPHB4P54760 987 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 TMEM62Q0P6H9 643 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 MCM6Q14566 821 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 FAM26DQ5JW98 314 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 RINT1Q6NUQ1 792 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 C1orf186Q6ZWK4 172 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 KSR1Q8IVT5 923 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 SYT2Q8N9I0 419 aaPredicted RBP14.48□□□□□ -0.09
CCDC42-202ENST00000539522 TMEM40Q8WWA1 233 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 RAD54LQ92698 747 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 DPF3Q92784 378 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 TMEM143Q96AN5 459 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 SCLYQ96I15 445 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 FAM49AQ9H0Q0 323 aaPredicted RBP14.48□□□□□ -0.09
CCDC42-202ENST00000539522 TMEM39AQ9NV64 488 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 STK24Q9Y6E0 443 aa14.48□□□□□ -0.09
CCDC42-202ENST00000539522 A0A1W2PQ27 194 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 A0A1W2PQ64 194 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 A0A1W2PQD8 194 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 TLR3O15455 904 aaKnown RBP14.47□□□□□ -0.09
CCDC42-202ENST00000539522 USO1O60763 962 aaKnown RBP14.47□□□□□ -0.09
CCDC42-202ENST00000539522 NBNO60934 754 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 TIMP1P01033 207 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 VTNP04004 478 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 IQCF3P0C7M6 154 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 PLA2G4BP0C869 781 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 GNAT1P11488 350 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 PFKFB1P16118 471 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 ARL2P36404 184 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 NDUFA8P51970 172 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 CCL23P55773 120 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 TBC1D8BQ0IIM8 1120 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 EMC2Q15006 297 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 PADI6Q6TGC4 694 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 C16orf59Q7L2K0 433 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 PDILTQ8N807 584 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 ASAP3Q8TDY4 903 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 BSNDQ8WZ55 320 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 ZNF668Q96K58 619 aaPredicted RBP14.47□□□□□ -0.09
CCDC42-202ENST00000539522 ANP32EQ9BTT0 268 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 ADAMTS10Q9H324 1103 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 HIPK3Q9H422 1215 aa14.47□□□□□ -0.09
CCDC42-202ENST00000539522 PRDM5Q9NQX1 630 aaPredicted RBP14.47□□□□□ -0.09
CCDC42-202ENST00000539522 MYH11P35749 1972 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 H0YGN5 161 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 PITPNM1O00562 1244 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 MAGEB2O15479 319 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 ACTN4O43707 911 aaKnown RBP14.46□□□□□ -0.09
CCDC42-202ENST00000539522 CTSHP09668 335 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 CYP11B2P19099 503 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 THPOP40225 353 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 RFC5P40937 340 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 TAF2Q6P1X5 1199 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 OTUD6AQ7L8S5 288 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 ENGASEQ8NFI3 743 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 BADQ92934 168 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 PPP1R16BQ96T49 567 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 NT5C3AQ9H0P0 336 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 SUGCTQ9HAC7 445 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 DNM3Q9UQ16 869 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 PPME1Q9Y570 386 aa14.46□□□□□ -0.09
CCDC42-202ENST00000539522 GOLGA6L4A6NEF3 574 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 MYMKA6NI61 221 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 RSPH10B2B2RC85 870 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 POLR2DO15514 142 aaKnown RBP14.45□□□□□ -0.1
CCDC42-202ENST00000539522 DGAT1O75907 488 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 MBD3O95983 291 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 RSPH10BP0C881 870 aa14.45□□□□□ -0.1
CCDC42-202ENST00000539522 GLRA2P23416 452 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms