RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 GPR32O75388 356 aa17.61■□□□□ 0.41
RPAIN-206ENST00000539417 MAFO75444 373 aaPredicted RBP17.61■□□□□ 0.41
RPAIN-206ENST00000539417 F13A1P00488 732 aa17.61■□□□□ 0.41
RPAIN-206ENST00000539417 MARCKSP29966 332 aaPredicted RBP17.61■□□□□ 0.41
RPAIN-206ENST00000539417 CCT6AP40227 531 aaKnown RBP17.61■□□□□ 0.41
RPAIN-206ENST00000539417 KIZQ2M2Z5 673 aa17.61■□□□□ 0.41
RPAIN-206ENST00000539417 PLEKHG4Q58EX7 1191 aa17.61■□□□□ 0.41
RPAIN-206ENST00000539417 FBXO47Q5MNV8 452 aa17.61■□□□□ 0.41
RPAIN-206ENST00000539417 KCNK18Q7Z418 384 aa17.61■□□□□ 0.41
RPAIN-206ENST00000539417 TMCO2Q7Z6W1 182 aaPredicted RBP17.61■□□□□ 0.41
RPAIN-206ENST00000539417 RSPH3Q86UC2 560 aa17.61■□□□□ 0.41
RPAIN-206ENST00000539417 SNX29Q8TEQ0 813 aa17.61■□□□□ 0.41
RPAIN-206ENST00000539417 CELF4Q9BZC1 486 aaKnown RBP17.61■□□□□ 0.41
RPAIN-206ENST00000539417 ZSCAN16Q9H4T2 348 aaPredicted RBP17.61■□□□□ 0.41
RPAIN-206ENST00000539417 TFIP11Q9UBB9 837 aaKnown RBP17.61■□□□□ 0.41
RPAIN-206ENST00000539417 GINS2Q9Y248 185 aa17.61■□□□□ 0.41
RPAIN-206ENST00000539417 DKC1O60832 514 aaKnown RBP eCLIP17.6■□□□□ 0.41
RPAIN-206ENST00000539417 RARRES1P49788 294 aa17.6■□□□□ 0.41
RPAIN-206ENST00000539417 KSR1Q8IVT5 923 aa17.6■□□□□ 0.41
RPAIN-206ENST00000539417 NME8Q8N427 588 aa17.6■□□□□ 0.41
RPAIN-206ENST00000539417 TMEM143Q96AN5 459 aa17.6■□□□□ 0.41
RPAIN-206ENST00000539417 PNMA5Q96PV4 448 aa17.6■□□□□ 0.41
RPAIN-206ENST00000539417 OSMRQ99650 979 aa17.6■□□□□ 0.41
RPAIN-206ENST00000539417 ADAMTS10Q9H324 1103 aa17.6■□□□□ 0.41
RPAIN-206ENST00000539417 DHX33Q9H6R0 707 aaKnown RBP17.6■□□□□ 0.41
RPAIN-206ENST00000539417 XPNPEP1Q9NQW7 623 aa17.6■□□□□ 0.41
RPAIN-206ENST00000539417 ZBBXA8MT70 800 aa17.59■□□□□ 0.41
RPAIN-206ENST00000539417 PFKMP08237 780 aa17.59■□□□□ 0.41
RPAIN-206ENST00000539417 FXR1P51114 621 aaKnown RBP eCLIP17.59■□□□□ 0.41
RPAIN-206ENST00000539417 LRIT3Q3SXY7 679 aa17.59■□□□□ 0.41
RPAIN-206ENST00000539417 IER5Q5VY09 327 aa17.59■□□□□ 0.41
RPAIN-206ENST00000539417 ARL6IP4Q66PJ3 421 aaKnown RBP17.59■□□□□ 0.41
RPAIN-206ENST00000539417 CNKSR3Q6P9H4 555 aa17.59■□□□□ 0.41
RPAIN-206ENST00000539417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.59■□□□□ 0.412e-8■■■■■ 28.9
RPAIN-206ENST00000539417 ERMNQ8TAM6 284 aa17.59■□□□□ 0.41
RPAIN-206ENST00000539417 LRRC15Q8TF66 581 aa17.59■□□□□ 0.41
RPAIN-206ENST00000539417 CLIC6Q96NY7 704 aa17.59■□□□□ 0.41
RPAIN-206ENST00000539417 PLIN2Q99541 437 aa17.59■□□□□ 0.41
RPAIN-206ENST00000539417 ANKEF1Q9NU02 776 aa17.59■□□□□ 0.41
RPAIN-206ENST00000539417 DAXXQ9UER7 740 aaPredicted RBP17.59■□□□□ 0.41
RPAIN-206ENST00000539417 FBXO2Q9UK22 296 aaPredicted RBP17.59■□□□□ 0.41
RPAIN-206ENST00000539417 KIAA1024Q9UPX6 916 aa17.59■□□□□ 0.41
RPAIN-206ENST00000539417 AKT3Q9Y243 479 aa17.59■□□□□ 0.41
RPAIN-206ENST00000539417 KDM3AQ9Y4C1 1321 aa17.58■□□□□ 0.41
RPAIN-206ENST00000539417 PARNO95453 639 aaKnown RBP17.58■□□□□ 0.41
RPAIN-206ENST00000539417 CD52P31358 61 aa17.58■□□□□ 0.41
RPAIN-206ENST00000539417 GPC3P51654 580 aa17.58■□□□□ 0.41
RPAIN-206ENST00000539417 NLRP11P59045 1033 aaKnown RBP17.58■□□□□ 0.41
RPAIN-206ENST00000539417 DEFB103AP81534 67 aa17.58■□□□□ 0.41
RPAIN-206ENST00000539417 BECN1Q14457 450 aa17.58■□□□□ 0.41
RPAIN-206ENST00000539417 EMC2Q15006 297 aa17.58■□□□□ 0.41
RPAIN-206ENST00000539417 SPECC1Q5M775 1068 aa17.58■□□□□ 0.41
RPAIN-206ENST00000539417 USP49Q70CQ1 688 aa17.58■□□□□ 0.41
RPAIN-206ENST00000539417 OTUD6AQ7L8S5 288 aa17.58■□□□□ 0.41
RPAIN-206ENST00000539417 POLD4Q9HCU8 107 aa17.58■□□□□ 0.41
RPAIN-206ENST00000539417 DDX19AQ9NUU7 478 aaKnown RBP17.58■□□□□ 0.41
RPAIN-206ENST00000539417 SUCLA2Q9P2R7 463 aaPredicted RBP17.58■□□□□ 0.41
RPAIN-206ENST00000539417 NOC2LQ9Y3T9 749 aaKnown RBP17.58■□□□□ 0.41
RPAIN-206ENST00000539417 CHD9Q3L8U1 2897 aa17.58■□□□□ 0.4
RPAIN-206ENST00000539417 E9PMD0 336 aa17.57■□□□□ 0.4
RPAIN-206ENST00000539417 CSDE1O75534 798 aaKnown RBP17.57■□□□□ 0.4
RPAIN-206ENST00000539417 BRD1O95696 1058 aa17.57■□□□□ 0.4
RPAIN-206ENST00000539417 POLGP54098 1239 aaPredicted RBP17.57■□□□□ 0.4
RPAIN-206ENST00000539417 WDR5P61964 334 aaKnown RBP17.57■□□□□ 0.4
RPAIN-206ENST00000539417 GRB10Q13322 594 aa17.57■□□□□ 0.4
RPAIN-206ENST00000539417 ZRSR1Q15695 479 aaKnown RBP17.57■□□□□ 0.4
RPAIN-206ENST00000539417 LINC01599Q8WXQ3 324 aa17.57■□□□□ 0.4
RPAIN-206ENST00000539417 IFIH1Q9BYX4 1025 aaKnown RBP17.57■□□□□ 0.4
RPAIN-206ENST00000539417 GBF1Q92538 1859 aa17.57■□□□□ 0.4
RPAIN-206ENST00000539417 MICAL3Q7RTP6 2002 aa17.57■□□□□ 0.4
RPAIN-206ENST00000539417 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.56■□□□□ 0.4
RPAIN-206ENST00000539417 USO1O60763 962 aaKnown RBP17.56■□□□□ 0.4
RPAIN-206ENST00000539417 FGFR4P22455 802 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 PBX2P40425 430 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 RFC5P40937 340 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 NASPP49321 788 aaPredicted RBP17.56■□□□□ 0.4
RPAIN-206ENST00000539417 RABGGTBP53611 331 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 KRT79Q5XKE5 535 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 HAUS3Q68CZ6 603 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 TSHZ1Q6ZSZ6 1077 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 MAEAQ7L5Y9 396 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 RTN4RL1Q86UN2 441 aaPredicted RBP17.56■□□□□ 0.4
RPAIN-206ENST00000539417 NACC1Q96RE7 527 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 MAP7D2Q96T17 732 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 RAB34Q9BZG1 259 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 CSRNP2Q9H175 543 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 TMX1Q9H3N1 280 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 GPRC5CQ9NQ84 441 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 DBR1Q9UK59 544 aaKnown RBP17.56■□□□□ 0.4
RPAIN-206ENST00000539417 PADI3Q9ULW8 664 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 A0A087WZ62 844 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 M0QZ92 97 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 MGEA5O60502 916 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 ACTN1P12814 892 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 XRCC6P12956 609 aaKnown RBP eCLIP17.56■□□□□ 0.4
RPAIN-206ENST00000539417 TMOD1P28289 359 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 CRYBB1P53674 252 aaPredicted RBP17.56■□□□□ 0.4
RPAIN-206ENST00000539417 SLC39A14Q15043 492 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 FAM228AQ86W67 206 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 RHPN2Q8IUC4 686 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms