RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 TSPEARQ8WU66 669 aa4.14□□□□□ -1.75
SNHG1-210ENST00000539303 FERMT2Q96AC1 680 aa4.14□□□□□ -1.75
SNHG1-210ENST00000539303 DDX11Q96FC9 970 aa4.14□□□□□ -1.75
SNHG1-210ENST00000539303 ACAP3Q96P50 834 aa4.14□□□□□ -1.75
SNHG1-210ENST00000539303 FOXB1Q99853 325 aa4.14□□□□□ -1.75
SNHG1-210ENST00000539303 SGPP1Q9BX95 441 aa4.14□□□□□ -1.75
SNHG1-210ENST00000539303 KCTD10Q9H3F6 313 aa4.14□□□□□ -1.75
SNHG1-210ENST00000539303 INCENPQ9NQS7 918 aa4.14□□□□□ -1.75
SNHG1-210ENST00000539303 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.14□□□□□ -1.75
SNHG1-210ENST00000539303 USP36Q9P275 1121 aaKnown RBP4.14□□□□□ -1.75
SNHG1-210ENST00000539303 DPP7Q9UHL4 492 aa4.14□□□□□ -1.75
SNHG1-210ENST00000539303 MAGEL2Q9UJ55 1249 aa4.14□□□□□ -1.75
SNHG1-210ENST00000539303 GPR45Q9Y5Y3 372 aa4.14□□□□□ -1.75
SNHG1-210ENST00000539303 VSTM5A8MXK1 200 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 PFKMP08237 780 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 EPHB3P54753 998 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 IL13RA1P78552 427 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 RBM10P98175 930 aaKnown RBP4.13□□□□□ -1.75
SNHG1-210ENST00000539303 ADCY2Q08462 1091 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 ADCY1Q08828 1119 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 ZNF267Q14586 743 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-210ENST00000539303 SKIDA1Q1XH10 827 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 MAP9Q49MG5 647 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 EFCAB2Q5VUJ9 269 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 KIAA1841Q6NSI8 718 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 PRR23BQ6ZRT6 265 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 KANSL1Q7Z3B3 1105 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 IRF2BP1Q8IU81 584 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 SLC41A1Q8IVJ1 513 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 DTX3Q8N9I9 347 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 SMARCC2Q8TAQ2 1214 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 TIFAQ96CG3 184 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 HSPBAP1Q96EW2 488 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 DIRC2Q96SL1 478 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 TACO1Q9BSH4 297 aaKnown RBP4.13□□□□□ -1.75
SNHG1-210ENST00000539303 ZNF552Q9H707 407 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-210ENST00000539303 CNTD2Q9H8S5 307 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 TCF7L1Q9HCS4 588 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 ZNF277Q9NRM2 450 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-210ENST00000539303 DDX20Q9UHI6 824 aaKnown RBP4.13□□□□□ -1.75
SNHG1-210ENST00000539303 MBD1Q9UIS9 605 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-210ENST00000539303 MRFAP1Q9Y605 127 aa4.13□□□□□ -1.75
SNHG1-210ENST00000539303 CARMIL2Q6F5E8 1435 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 NDUFS2O75306 463 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 LPOP22079 712 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-210ENST00000539303 ECE1P42892 770 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 CDR1P51861 262 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 NKX3-2P78367 333 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 KRT85P78386 507 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 SRSF3P84103 164 aaKnown RBP4.12□□□□□ -1.75
SNHG1-210ENST00000539303 ROM1Q03395 351 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 CACNB2Q08289 660 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-210ENST00000539303 ADAM9Q13443 819 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 MUM1Q2TAK8 710 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 VASNQ6EMK4 673 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 MPZL3Q6UWV2 235 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 NME9Q86XW9 330 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 IGDCC4Q8TDY8 1250 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 FAM168AQ92567 244 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 CLIP3Q96DZ5 547 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 NOX5Q96PH1 765 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 CAMKK2Q96RR4 588 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 MCOLN1Q9GZU1 580 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 MTG2Q9H4K7 406 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 ZFP64Q9NPA5 681 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 DMRT3Q9NQL9 472 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 CHST12Q9NRB3 414 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 GALNT8Q9NY28 637 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 HSPBP1Q9NZL4 362 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 ZFP69BQ9UJL9 534 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 USP18Q9UMW8 372 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 ANKRD6Q9Y2G4 727 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 GIT1Q9Y2X7 761 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 PCDHA5Q9Y5H7 936 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 MYPNQ86TC9 1320 aa4.12□□□□□ -1.75
SNHG1-210ENST00000539303 ENO2P09104 434 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-210ENST00000539303 ADCY8P40145 1251 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 LIMS1P48059 325 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 ITGA1P56199 1179 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 ANTXR2P58335 489 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 CD83Q01151 205 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 KIF23Q02241 960 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-210ENST00000539303 PPARAQ07869 468 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 GALEQ14376 348 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 GRM3Q14832 879 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 RGL3Q3MIN7 710 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 RRP12Q5JTH9 1297 aaKnown RBP4.11□□□□□ -1.75
SNHG1-210ENST00000539303 KANK2Q63ZY3 851 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 TIGD7Q6NT04 549 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-210ENST00000539303 SLC4A10Q6U841 1118 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 GAREM2Q75VX8 874 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 LDHDQ86WU2 507 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 IGDCC3Q8IVU1 814 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 STPG3Q8N7X2 389 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 GORASP1Q9BQQ3 440 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 GTPBP4Q9BZE4 634 aaKnown RBP4.11□□□□□ -1.75
SNHG1-210ENST00000539303 SLC12A5Q9H2X9 1139 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 NSUN3Q9H649 340 aaKnown RBP4.11□□□□□ -1.75
SNHG1-210ENST00000539303 IFT122Q9HBG6 1241 aa4.11□□□□□ -1.75
SNHG1-210ENST00000539303 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms