RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 SOD2P04179 222 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 RABGGTBP53611 331 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 MAP4K2Q12851 820 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 STILQ15468 1287 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 GPR162Q16538 588 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 TIGD2Q4W5G0 525 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 LARP1BQ659C4 914 aaKnown RBP3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 TMEM200BQ69YZ2 307 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 FAM111BQ6SJ93 734 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 LRP10Q7Z4F1 713 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 ZC3H7AQ8IWR0 971 aaKnown RBP3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 FAM178BQ8IXR5 827 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 ELOA2Q8IYF1 753 aaPredicted RBP3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 ZNF654Q8IZM8 581 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 CPT1CQ8TCG5 803 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 ATXN2LQ8WWM7 1075 aaKnown RBP3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 SPATA32Q96LK8 384 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 MNTQ99583 582 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 BRIP1Q9BX63 1249 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 BTBD2Q9BX70 525 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 IPPKQ9H8X2 491 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 UCKL1Q9NWZ5 548 aa3.12□□□□□ -1.91
CBX3P4-201ENST00000538909 COL4A3Q01955 1670 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 UBE2QL1A1L167 161 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 PRAMEF25A6NGN4 478 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 GOLGA8BA8MQT2 603 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 ERCC3P19447 782 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 AOAHP28039 575 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 ECE1P42892 770 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 KANK2Q63ZY3 851 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 GRAMD4Q6IC98 578 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 SUPT20HQ8NEM7 779 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 SCARB1Q8WTV0 552 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 AMNQ9BXJ7 453 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 SORCS3Q9UPU3 1222 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 FRMD4BQ9Y2L6 1034 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 HS3ST4Q9Y661 456 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 NESP48681 1621 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 CADPSQ9ULU8 1353 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 KIF21AQ7Z4S6 1674 aa3.11□□□□□ -1.91
CBX3P4-201ENST00000538909 GOLGA6L6A8MZA4 724 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 FAM47E-STBD1D6RA91 191 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 DLX3O60479 287 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 LPXNO60711 386 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 MPIG6BO95866 241 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 PPP2R2AP63151 447 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 FKBP15Q5T1M5 1219 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 RSPO2Q6UXX9 243 aaPredicted RBP3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 Q6YL49 198 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 ARHGAP36Q6ZRI8 547 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 ZNF366Q8N895 744 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 ANKRD53Q8N9V6 530 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 SMG7Q92540 1137 aaKnown RBP3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 FAM193BQ96PV7 902 aaPredicted RBP3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 GPHA2Q96T91 129 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 SPATA5L1Q9BVQ7 753 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 BACH2Q9BYV9 841 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 SLC29A3Q9BZD2 475 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 OR10A5Q9H207 317 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 METTL5Q9NRN9 209 aaKnown RBP3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 BTBD7Q9P203 1132 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 ANKFY1Q9P2R3 1169 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 SRPK3Q9UPE1 567 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 INSL6Q9Y581 213 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 CTDP1Q9Y5B0 961 aaPredicted RBP3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 RBM8AQ9Y5S9 174 aaKnown RBP3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 ATP23Q9Y6H3 246 aa3.1□□□□□ -1.91
CBX3P4-201ENST00000538909 WDR62O43379 1518 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 CENPVL1A0A0U1RR11 272 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 BLACEA4D250 179 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 GRXCR1A8MXD5 290 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 MAN2B1O00754 1011 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 DDAH1O94760 285 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 SCAF4O95104 1147 aaKnown RBP3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 ONECUT2O95948 504 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 KRT15P19012 456 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 ZFP36P26651 326 aaKnown RBP3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 ADCY7P51828 1080 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 USP14P54578 494 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 BPIFB4P59827 614 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 GPR85P60893 370 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 ST5P78524 1137 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 PLEKHG4Q58EX7 1191 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 C1QL3Q5VWW1 255 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 MRM1Q6IN84 353 aaKnown RBP3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 EP400NLQ6ZTU2 488 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 PTRH1Q86Y79 214 aaKnown RBP3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 NLGN4XQ8N0W4 816 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 BOLLQ8N9W6 283 aaKnown RBP3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 C9orf106Q8NAJ2 232 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 RASGRP4Q8TDF6 673 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 DCAF4Q8WV16 495 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 TCF25Q9BQ70 676 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 KRTAP1-5Q9BYS1 174 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 ZNF768Q9H5H4 540 aaKnown RBP3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 MAGEL2Q9UJ55 1249 aa3.09□□□□□ -1.91
CBX3P4-201ENST00000538909 KCNK3O14649 394 aa3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 ZNF185O15231 689 aa3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 CAPNS1P04632 268 aa3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 MMEP08473 750 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms