RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 NT5C2P49902 561 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 ATP11AP98196 1134 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 KCNMA1Q12791 1236 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 ORC2Q13416 577 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-209ENST00000538654 UBE4AQ14139 1066 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 CLUL1Q15846 466 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 TXNRD1Q16881 649 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 CYB5RLQ6IPT4 315 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 LRRC55Q6ZSA7 311 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 ZNF570Q96NI8 536 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 SELENOSQ9BQE4 189 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 BSDC1Q9NW68 430 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-209ENST00000538654 PCDHA6Q9UN73 950 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 PCDHA8Q9Y5H6 950 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 A0A087X0T9 212 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 AHCYL1O43865 530 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 DIAPH2O60879 1101 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 VIMP08670 466 aaKnown RBP9.79□□□□□ -0.84
SNHG1-209ENST00000538654 FAM228BP0C875 321 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 POLR2FP61218 127 aaKnown RBP9.79□□□□□ -0.84
SNHG1-209ENST00000538654 FKBP3Q00688 224 aaKnown RBP9.79□□□□□ -0.84
SNHG1-209ENST00000538654 POU5F1Q01860 360 aaKnown RBP9.79□□□□□ -0.84
SNHG1-209ENST00000538654 RAPGEF1Q13905 1077 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 KCTD2Q14681 263 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 FAM133BQ5BKY9 247 aaKnown RBP9.79□□□□□ -0.84
SNHG1-209ENST00000538654 C6orf118Q5T5N4 469 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 DENND2CQ68D51 928 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 MDM1Q8TC05 714 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 BEGAINQ9BUH8 593 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 LSM14BQ9BX40 385 aaKnown RBP9.79□□□□□ -0.84
SNHG1-209ENST00000538654 AP1M1Q9BXS5 423 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 TXLNGYQ9BZA5 131 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 DDX47Q9H0S4 455 aaKnown RBP9.79□□□□□ -0.84
SNHG1-209ENST00000538654 PANK4Q9NVE7 773 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 SUCLA2Q9P2R7 463 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-209ENST00000538654 L3MBTL1Q9Y468 752 aa9.79□□□□□ -0.84
SNHG1-209ENST00000538654 ADAMTSL3P82987 1691 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 STXBP3O00186 592 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 ABLIM1O14639 778 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 RGS16O15492 202 aaPredicted RBP9.78□□□□□ -0.84
SNHG1-209ENST00000538654 CAND2O75155 1236 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 WFS1O76024 890 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 FESP07332 822 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 NEFHP12036 1026 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 PECAM1P16284 738 aaPredicted RBP9.78□□□□□ -0.84
SNHG1-209ENST00000538654 ATP2A2P16615 1042 aaKnown RBP9.78□□□□□ -0.84
SNHG1-209ENST00000538654 GBP1P32455 592 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 FLT3P36888 993 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 PEX19P40855 299 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 INF2Q27J81 1249 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 SLC4A8Q2Y0W8 1093 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 TAOK1Q7L7X3 1001 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 COL23A1Q86Y22 540 aaPredicted RBP9.78□□□□□ -0.84
SNHG1-209ENST00000538654 LRRC34Q8IZ02 419 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 LRRC57Q8N9N7 239 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 NEK9Q8TD19 979 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 LRRC15Q8TF66 581 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 CEP63Q96MT8 703 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 PHOX2BQ99453 314 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 NAP1L3Q99457 506 aaPredicted RBP9.78□□□□□ -0.84
SNHG1-209ENST00000538654 ELAC2Q9BQ52 826 aaKnown RBP9.78□□□□□ -0.84
SNHG1-209ENST00000538654 ZMYND12Q9H0C1 365 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 PABPC3Q9H361 631 aaKnown RBP9.78□□□□□ -0.84
SNHG1-209ENST00000538654 ADAMTS1Q9UHI8 967 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 AMACRQ9UHK6 382 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 TTC7AQ9ULT0 858 aaPredicted RBP9.78□□□□□ -0.84
SNHG1-209ENST00000538654 ATP8A1Q9Y2Q0 1164 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 KIF13BQ9NQT8 1826 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 NKRFO15226 690 aaKnown RBP eCLIP9.78□□□□□ -0.84
SNHG1-209ENST00000538654 NOL4O94818 638 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 SUN1O94901 812 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 KRT25Q7Z3Z0 450 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 PEX26Q7Z412 305 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 METTL13Q8N6R0 699 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 SLC39A13Q96H72 371 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 ECT2Q9H8V3 914 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 QTRT2Q9H974 415 aaKnown RBP9.78□□□□□ -0.84
SNHG1-209ENST00000538654 CNOT7Q9UIV1 285 aaKnown RBP9.78□□□□□ -0.84
SNHG1-209ENST00000538654 PCDHGB7Q9Y5F8 929 aa9.78□□□□□ -0.84
SNHG1-209ENST00000538654 BAZ2AQ9UIF9 1905 aaKnown RBP9.77□□□□□ -0.84
SNHG1-209ENST00000538654 A0A0A6YYK5 440 aaPredicted RBP9.77□□□□□ -0.84
SNHG1-209ENST00000538654 O00370 1275 aa9.77□□□□□ -0.84
SNHG1-209ENST00000538654 TTI1O43156 1089 aa9.77□□□□□ -0.84
SNHG1-209ENST00000538654 SSR1P43307 286 aaKnown RBP9.77□□□□□ -0.84
SNHG1-209ENST00000538654 ALDH5A1P51649 535 aaPredicted RBP9.77□□□□□ -0.84
SNHG1-209ENST00000538654 PMS2P54278 862 aa9.77□□□□□ -0.84
SNHG1-209ENST00000538654 COPS2P61201 443 aa9.77□□□□□ -0.84
SNHG1-209ENST00000538654 NCALDP61601 193 aa9.77□□□□□ -0.84
SNHG1-209ENST00000538654 TRAF1Q13077 416 aa9.77□□□□□ -0.84
SNHG1-209ENST00000538654 ZNF746Q6NUN9 644 aaPredicted RBP9.77□□□□□ -0.84
SNHG1-209ENST00000538654 BTNL9Q6UXG8 535 aa9.77□□□□□ -0.84
SNHG1-209ENST00000538654 KLHL29Q96CT2 875 aa9.77□□□□□ -0.84
SNHG1-209ENST00000538654 TRMT112Q9UI30 125 aaKnown RBP9.77□□□□□ -0.84
SNHG1-209ENST00000538654 SLC45A1Q9Y2W3 748 aa9.77□□□□□ -0.84
SNHG1-209ENST00000538654 USP15Q9Y4E8 981 aaPredicted RBP9.77□□□□□ -0.84
SNHG1-209ENST00000538654 BAZ2BQ9UIF8 2168 aaKnown RBP9.77□□□□□ -0.85
SNHG1-209ENST00000538654 FAM187AA6NFU0 413 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 A6NHS1 94 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 ADAMTS3O15072 1205 aa9.77□□□□□ -0.85
SNHG1-209ENST00000538654 HIP1RO75146 1068 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms