RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 NACC1Q96RE7 527 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 ABCB6Q9NP58 842 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 PKD2L1Q9P0L9 805 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 CDC23Q9UJX2 597 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 PPP2R3BQ9Y5P8 575 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 DDX39AO00148 427 aaKnown RBP11.81□□□□□ -0.52
CLIP1-210ENST00000538120 NDUFA10O95299 355 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 ADAM9Q13443 819 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 NOL9Q5SY16 702 aaKnown RBP11.81□□□□□ -0.52
CLIP1-210ENST00000538120 BANK1Q8NDB2 785 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 FIZ1Q96SL8 496 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 LXNQ9BS40 222 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 VPS18Q9P253 973 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 RLFQ13129 1914 aa11.81□□□□□ -0.52
CLIP1-210ENST00000538120 C19orf81C9J6K1 198 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 TRIM66O15016 1216 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 KIF5CO60282 957 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 USP2O75604 605 aaPredicted RBP11.8□□□□□ -0.52
CLIP1-210ENST00000538120 GNA14O95837 355 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 VSNL1P62760 191 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 KCNA1Q09470 495 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 GPS2Q13227 327 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 BRD3Q15059 726 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 CCDC40Q4G0X9 1142 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 RNF207Q6ZRF8 634 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLIP1-210ENST00000538120 PDCD2LQ9BRP1 358 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 PXMP2Q9NR77 195 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 OLFML3Q9NRN5 406 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 IGSF5Q9NSI5 407 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 PNMA2Q9UL42 364 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 AFG3L2Q9Y4W6 797 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 PARP14Q460N5 1801 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 PHIPQ8WWQ0 1821 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 TBCAO75347 108 aaKnown RBP11.8□□□□□ -0.52
CLIP1-210ENST00000538120 DDNO94850 711 aaPredicted RBP11.8□□□□□ -0.52
CLIP1-210ENST00000538120 GAP43P17677 238 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 HNRNPH3P31942 346 aaKnown RBP11.8□□□□□ -0.52
CLIP1-210ENST00000538120 ZNF131P52739 623 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 HERVK_113P62684 666 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 BAATQ14032 418 aaPredicted RBP11.8□□□□□ -0.52
CLIP1-210ENST00000538120 CATSPERGQ6ZRH7 1159 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 SMCR8Q8TEV9 937 aaPredicted RBP11.8□□□□□ -0.52
CLIP1-210ENST00000538120 IQCDQ96DY2 449 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 FAM207AQ9NSI2 230 aaPredicted RBP11.8□□□□□ -0.52
CLIP1-210ENST00000538120 RNF146Q9NTX7 359 aa11.8□□□□□ -0.52
CLIP1-210ENST00000538120 ZNF214Q9UL59 606 aaPredicted RBP11.8□□□□□ -0.52
CLIP1-210ENST00000538120 CTDP1Q9Y5B0 961 aaPredicted RBP11.8□□□□□ -0.52
CLIP1-210ENST00000538120 ASTN1O14525 1302 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 PDXKO00764 312 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 EVI5O60447 810 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 ATP9AO75110 1047 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 NUDT7P0C024 238 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 NMT1P30419 496 aaKnown RBP11.79□□□□□ -0.52
CLIP1-210ENST00000538120 CDK17Q00537 523 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 MTMR1Q13613 665 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 TMEM132BQ14DG7 1078 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 NSMFQ6X4W1 530 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 MIER3Q7Z3K6 550 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 ANKRD13AQ8IZ07 590 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 BAP1Q92560 729 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 EXOC4Q96A65 974 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 RMDN3Q96TC7 470 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 IKZF4Q9H2S9 585 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 MMRN2Q9H8L6 949 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 L1RE1Q9UN81 338 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 CETN3O15182 167 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 TGFB1I1O43294 461 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 PHACTR2O75167 634 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 NOL4O94818 638 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 MYCLP12524 364 aaPredicted RBP11.79□□□□□ -0.52
CLIP1-210ENST00000538120 NR2F2P24468 414 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 PRKG1Q13976 671 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 COG2Q14746 738 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 TSR1Q2NL82 804 aaKnown RBP11.79□□□□□ -0.52
CLIP1-210ENST00000538120 LCE2DQ5TA82 110 aaPredicted RBP11.79□□□□□ -0.52
CLIP1-210ENST00000538120 MYCT1Q8N699 235 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 CEP112Q8N8E3 955 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 NOA1Q8NC60 698 aaKnown RBP11.79□□□□□ -0.52
CLIP1-210ENST00000538120 NEK9Q8TD19 979 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 NHEJ1Q9H9Q4 299 aaPredicted RBP11.79□□□□□ -0.52
CLIP1-210ENST00000538120 RAB21Q9UL25 225 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 FAN1Q9Y2M0 1017 aa11.79□□□□□ -0.52
CLIP1-210ENST00000538120 ZMYM2Q9UBW7 1377 aa11.78□□□□□ -0.52
CLIP1-210ENST00000538120 CTAGE9A4FU28 777 aa11.78□□□□□ -0.52
CLIP1-210ENST00000538120 FAM13AO94988 1023 aa11.78□□□□□ -0.52
CLIP1-210ENST00000538120 GCNT3O95395 438 aa11.78□□□□□ -0.52
CLIP1-210ENST00000538120 P4HBP07237 508 aaKnown RBP11.78□□□□□ -0.52
CLIP1-210ENST00000538120 GUCY2CP25092 1073 aa11.78□□□□□ -0.52
CLIP1-210ENST00000538120 OAZ1P54368 228 aa11.78□□□□□ -0.52
CLIP1-210ENST00000538120 MAPK7Q13164 816 aa11.78□□□□□ -0.52
CLIP1-210ENST00000538120 SUPT20HL1Q3ZLR7 823 aa11.78□□□□□ -0.52
CLIP1-210ENST00000538120 ZC2HC1CQ53FD0 456 aaPredicted RBP11.78□□□□□ -0.52
CLIP1-210ENST00000538120 SNRNP48Q6IEG0 339 aaKnown RBP11.78□□□□□ -0.52
CLIP1-210ENST00000538120 FOXR1Q6PIV2 292 aa11.78□□□□□ -0.52
CLIP1-210ENST00000538120 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.78□□□□□ -0.52
CLIP1-210ENST00000538120 DAW1Q8N136 415 aa11.78□□□□□ -0.52
CLIP1-210ENST00000538120 MSANTD4Q8NCY6 345 aa11.78□□□□□ -0.52
CLIP1-210ENST00000538120 HNRNPLLQ8WVV9 542 aaKnown RBP11.78□□□□□ -0.52
CLIP1-210ENST00000538120 TYW1Q9NV66 732 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms