RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 CTSHP09668 335 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 HMGCS2P54868 508 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 PADI6Q6TGC4 694 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 TMEM270Q6UE05 265 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 GLYCTKQ8IVS8 523 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 OR6J1Q8NGC5 347 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 FSD1LQ9BXM9 530 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 BCAP29Q9UHQ4 241 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 INPP1P49441 399 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 FAM133BQ5BKY9 247 aaKnown RBP12.03□□□□□ -0.48
LINC00346-201ENST00000538077 EFCAB13Q8IY85 973 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 CCDC195A0A1B0GUA6 201 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 POTEB3A0JP26 581 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 POTECB2RU33 542 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 SPECC1L-ADORA2AF8WAN1 911 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 COPB2P35606 906 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 IL9RQ01113 521 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 MXD4Q14582 209 aaPredicted RBP12.03□□□□□ -0.48
LINC00346-201ENST00000538077 CCDC38Q502W7 563 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 POTEBQ6S5H4 581 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 MICALL2Q8IY33 904 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 SUGT1Q9Y2Z0 365 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 SRPRBQ9Y5M8 271 aaKnown RBP12.03□□□□□ -0.48
LINC00346-201ENST00000538077 CAMSAP1Q5T5Y3 1602 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 IRF1P10914 325 aa12.02□□□□□ -0.48
LINC00346-201ENST00000538077 KIF19Q2TAC6 998 aa12.02□□□□□ -0.48
LINC00346-201ENST00000538077 LINC00301Q8NCQ3 95 aa12.02□□□□□ -0.48
LINC00346-201ENST00000538077 PPWD1Q96BP3 646 aaKnown RBP12.02□□□□□ -0.48
LINC00346-201ENST00000538077 THAP9Q9H5L6 903 aa12.02□□□□□ -0.48
LINC00346-201ENST00000538077 ANLNQ9NQW6 1124 aa12.02□□□□□ -0.48
LINC00346-201ENST00000538077 MROH7-TTC4A0A0A0MT08 1334 aa12.02□□□□□ -0.48
LINC00346-201ENST00000538077 SPATA31A3Q5VYP0 1347 aa12.02□□□□□ -0.48
LINC00346-201ENST00000538077 POTEFA5A3E0 1075 aa12.02□□□□□ -0.48
LINC00346-201ENST00000538077 POTEIP0CG38 1075 aa12.02□□□□□ -0.48
LINC00346-201ENST00000538077 KITP10721 976 aa12.02□□□□□ -0.48
LINC00346-201ENST00000538077 ZNF157P51786 506 aaPredicted RBP12.02□□□□□ -0.48
LINC00346-201ENST00000538077 FKBP3Q00688 224 aaKnown RBP12.02□□□□□ -0.48
LINC00346-201ENST00000538077 POTEGQ6S5H5 508 aa12.02□□□□□ -0.48
LINC00346-201ENST00000538077 POTEEQ6S8J3 1075 aa12.02□□□□□ -0.48
LINC00346-201ENST00000538077 MAML1Q92585 1016 aa12.02□□□□□ -0.48
LINC00346-201ENST00000538077 RUNDC3BQ96NL0 473 aa12.02□□□□□ -0.48
LINC00346-201ENST00000538077 DFFAO00273 331 aa12.02□□□□□ -0.49
LINC00346-201ENST00000538077 EVI5O60447 810 aa12.02□□□□□ -0.49
LINC00346-201ENST00000538077 MT-ND3P03897 115 aa12.02□□□□□ -0.49
LINC00346-201ENST00000538077 HOXD10P28358 340 aa12.02□□□□□ -0.49
LINC00346-201ENST00000538077 AP1B1Q10567 949 aa12.02□□□□□ -0.49
LINC00346-201ENST00000538077 LMBRD2Q68DH5 695 aaPredicted RBP12.02□□□□□ -0.49
LINC00346-201ENST00000538077 FAM217BQ9NTX9 383 aaPredicted RBP12.02□□□□□ -0.49
LINC00346-201ENST00000538077 HPCAL4Q9UM19 191 aa12.02□□□□□ -0.49
LINC00346-201ENST00000538077 MAPK6Q16659 721 aa12.02□□□□□ -0.49
LINC00346-201ENST00000538077 SLFN12LQ6IEE8 588 aa12.02□□□□□ -0.49
LINC00346-201ENST00000538077 DDX53Q86TM3 631 aaKnown RBP12.02□□□□□ -0.49
LINC00346-201ENST00000538077 ARHGEF37A1IGU5 675 aa12.02□□□□□ -0.49
LINC00346-201ENST00000538077 SRGAP2O75044 1071 aa12.02□□□□□ -0.49
LINC00346-201ENST00000538077 RECQLP46063 649 aaPredicted RBP12.02□□□□□ -0.49
LINC00346-201ENST00000538077 STRBPQ96SI9 672 aaKnown RBP12.02□□□□□ -0.49
LINC00346-201ENST00000538077 SLC7A5P2Q9GIP4 190 aa12.02□□□□□ -0.49
LINC00346-201ENST00000538077 INTS9Q9NV88 658 aaKnown RBP12.02□□□□□ -0.49
LINC00346-201ENST00000538077 DNAJC12Q9UKB3 198 aa12.02□□□□□ -0.49
LINC00346-201ENST00000538077 SLFN14P0C7P3 912 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 KCNA1Q09470 495 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 SYCP2LQ5T4T6 812 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 TMTC3Q6ZXV5 915 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 BEST2Q8NFU1 509 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 GJD4Q96KN9 370 aaPredicted RBP12.01□□□□□ -0.49
LINC00346-201ENST00000538077 KLHL8Q9P2G9 620 aaPredicted RBP12.01□□□□□ -0.49
LINC00346-201ENST00000538077 SUCLA2Q9P2R7 463 aaPredicted RBP12.01□□□□□ -0.49
LINC00346-201ENST00000538077 PCSK1NQ9UHG2 260 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 PRR29P0C7W0 189 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 HDLBPQ00341 1268 aaKnown RBP12.01□□□□□ -0.49
LINC00346-201ENST00000538077 SURF1Q15526 300 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 TXNRD1Q16881 649 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 STAG1Q8WVM7 1258 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 HAUS8Q9BT25 410 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 DRP2Q13474 957 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 RCSD1Q6JBY9 416 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 YAF2Q8IY57 180 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 ZNF513Q8N8E2 541 aaPredicted RBP12.01□□□□□ -0.49
LINC00346-201ENST00000538077 PGRMC1O00264 195 aaKnown RBP12.01□□□□□ -0.49
LINC00346-201ENST00000538077 ACSL3O95573 720 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 DR1Q01658 176 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 KIAA1755Q5JYT7 1200 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 RBM46Q8TBY0 533 aaKnown RBP12.01□□□□□ -0.49
LINC00346-201ENST00000538077 RAD54LQ92698 747 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 GBP5Q96PP8 586 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 UTYO14607 1347 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 A0A1W2PQ27 194 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 A0A1W2PQ64 194 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 A0A1W2PQD8 194 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 H7C1W4 665 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 TNFAIP2Q03169 654 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 MB21D1Q8N884 522 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 GIMAP8Q8ND71 665 aaPredicted RBP12.01□□□□□ -0.49
LINC00346-201ENST00000538077 CXorf38Q8TB03 319 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 NSUN6Q8TEA1 469 aaKnown RBP12.01□□□□□ -0.49
LINC00346-201ENST00000538077 NDST4Q9H3R1 872 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 KRT82Q9NSB4 513 aa12.01□□□□□ -0.49
LINC00346-201ENST00000538077 PP2D1A8MPX8 630 aa12□□□□□ -0.49
LINC00346-201ENST00000538077 CYP19A1P11511 503 aaPredicted RBP12□□□□□ -0.49
LINC00346-201ENST00000538077 GRIK1P39086 918 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms