RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 AKR1B10O60218 316 aa19.15■□□□□ 0.66
SNX17-210ENST00000537606 TLR2O60603 784 aa19.15■□□□□ 0.66
SNX17-210ENST00000537606 FSTL1Q12841 308 aa19.15■□□□□ 0.66
SNX17-210ENST00000537606 SPA17Q15506 151 aa19.15■□□□□ 0.66
SNX17-210ENST00000537606 TDRD12Q587J7 1177 aaKnown RBP19.15■□□□□ 0.66
SNX17-210ENST00000537606 SYCP3Q8IZU3 236 aa19.15■□□□□ 0.66
SNX17-210ENST00000537606 SYT17Q9BSW7 474 aa19.15■□□□□ 0.66
SNX17-210ENST00000537606 ELP3Q9H9T3 547 aa19.15■□□□□ 0.66
SNX17-210ENST00000537606 MACROD2A1Z1Q3 448 aa19.14■□□□□ 0.66
SNX17-210ENST00000537606 GFPT1Q06210 699 aaPredicted RBP19.14■□□□□ 0.66
SNX17-210ENST00000537606 XKR9Q5GH70 373 aa19.14■□□□□ 0.66
SNX17-210ENST00000537606 C9orf131Q5VYM1 1079 aa19.14■□□□□ 0.66
SNX17-210ENST00000537606 SLC35C1Q96A29 364 aa19.14■□□□□ 0.66
SNX17-210ENST00000537606 CLMNQ96JQ2 1002 aa19.14■□□□□ 0.66
SNX17-210ENST00000537606 PARD6BQ9BYG5 372 aa19.14■□□□□ 0.66
SNX17-210ENST00000537606 AGPAT3Q9NRZ7 376 aa19.14■□□□□ 0.66
SNX17-210ENST00000537606 CSADQ9Y600 493 aa19.14■□□□□ 0.66
SNX17-210ENST00000537606 PPP1R12BO60237 982 aaPredicted RBP19.14■□□□□ 0.65
SNX17-210ENST00000537606 PSMC5P62195 406 aa19.14■□□□□ 0.65
SNX17-210ENST00000537606 CNTN2Q02246 1040 aa19.14■□□□□ 0.65
SNX17-210ENST00000537606 RAPGEF1Q13905 1077 aa19.14■□□□□ 0.65
SNX17-210ENST00000537606 HGSNATQ68CP4 663 aa19.14■□□□□ 0.65
SNX17-210ENST00000537606 GADL1Q6ZQY3 521 aa19.14■□□□□ 0.65
SNX17-210ENST00000537606 FAM186BQ8IYM0 893 aa19.14■□□□□ 0.65
SNX17-210ENST00000537606 OTUD5Q96G74 571 aa19.14■□□□□ 0.65
SNX17-210ENST00000537606 GBP3Q9H0R5 595 aa19.14■□□□□ 0.65
SNX17-210ENST00000537606 MYO1AQ9UBC5 1043 aa19.14■□□□□ 0.65
SNX17-210ENST00000537606 DBR1Q9UK59 544 aaKnown RBP19.14■□□□□ 0.65
SNX17-210ENST00000537606 IRF6O14896 467 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 ATP2A1O14983 1001 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 ATP1A1P05023 1023 aaKnown RBP19.13■□□□□ 0.65
SNX17-210ENST00000537606 AMPD2Q01433 879 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 KRT76Q01546 638 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 SH3D19Q5HYK7 790 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 SFMBT2Q5VUG0 894 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 HS2ST1Q7LGA3 356 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 GPR161Q8N6U8 529 aaKnown RBP19.13■□□□□ 0.65
SNX17-210ENST00000537606 INPP4AQ96PE3 977 aaPredicted RBP19.13■□□□□ 0.65
SNX17-210ENST00000537606 PCDHA13Q9Y5I0 950 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 KRT86O43790 486 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 SRGAP2O75044 1071 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 JAK3P52333 1124 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 EXOC3L4Q17RC7 722 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 C4orf19Q8IY42 314 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 FAM133AQ8N9E0 248 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 RBM46Q8TBY0 533 aaKnown RBP19.13■□□□□ 0.65
SNX17-210ENST00000537606 RABGGTAQ92696 567 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 BORCS6Q96GS4 357 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 MOV10L1Q9BXT6 1211 aaKnown RBP19.13■□□□□ 0.65
SNX17-210ENST00000537606 IFIH1Q9BYX4 1025 aaKnown RBP19.13■□□□□ 0.65
SNX17-210ENST00000537606 EDEM3Q9BZQ6 932 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 GANQ9H2C0 597 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 PCIF1Q9H4Z3 704 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 METTL14Q9HCE5 456 aaKnown RBP19.13■□□□□ 0.65
SNX17-210ENST00000537606 BTBD7Q9P203 1132 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 LARSQ9P2J5 1176 aaKnown RBP19.13■□□□□ 0.65
SNX17-210ENST00000537606 GABBR1Q9UBS5 961 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 MYO6Q9UM54 1294 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 FHOD1Q9Y613 1164 aa19.13■□□□□ 0.65
SNX17-210ENST00000537606 TULP1O00294 542 aaPredicted RBP19.12■□□□□ 0.65
SNX17-210ENST00000537606 SLC16A3O15427 465 aaKnown RBP19.12■□□□□ 0.65
SNX17-210ENST00000537606 KCNA2P16389 499 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 PON1P27169 355 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 PSMC2P35998 433 aaKnown RBP19.12■□□□□ 0.65
SNX17-210ENST00000537606 SOX10P56693 466 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 FAM102BQ5T8I3 360 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 STXBP4Q6ZWJ1 553 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 ANO5Q75V66 913 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 GPRASP2Q96D09 838 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 ST7Q9NRC1 585 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 PCDHA10Q9Y5I2 948 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 LYPLA2O95372 231 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 VAV2P52735 878 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 PEX3P56589 373 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 KIF5AQ12840 1032 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 SWSAP1Q6NVH7 229 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 GJB7Q6PEY0 223 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 TMCO3Q6UWJ1 677 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 ANKRD35Q8N283 1001 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 ANKRD13CQ8N6S4 541 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 CEP112Q8N8E3 955 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 STRA6Q9BX79 667 aa19.12■□□□□ 0.65
SNX17-210ENST00000537606 ARGLU1Q9NWB6 273 aaPredicted RBP19.12■□□□□ 0.65
SNX17-210ENST00000537606 KIAA1217Q5T5P2 1943 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 PPP1R37O75864 691 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 SFNP31947 248 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 TTLL12Q14166 644 aaPredicted RBP19.11■□□□□ 0.65
SNX17-210ENST00000537606 DPY19L2P1Q6NXN4 242 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 R3HDMLQ9H3Y0 253 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 DOCK5Q9H7D0 1870 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 SLC16A4O15374 487 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 ZNF862O60290 1169 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 TRIM49P0CI25 452 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 TRIM49CP0CI26 452 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 PLS3P13797 630 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 SP2Q02086 613 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 SLC9C1Q4G0N8 1177 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 XRRA1Q6P2D8 792 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 PAGR1Q9BTK6 254 aa19.11■□□□□ 0.65
SNX17-210ENST00000537606 KIFC3Q9BVG8 833 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms