RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 MFSD10Q14728 455 aa17.37■□□□□ 0.37
SFSWAP-206ENST00000537582 KCNA10Q16322 511 aa17.37■□□□□ 0.37
SFSWAP-206ENST00000537582 KIAA0753Q2KHM9 967 aa17.37■□□□□ 0.37
SFSWAP-206ENST00000537582 CCSAPQ6IQ19 270 aaPredicted RBP17.37■□□□□ 0.37
SFSWAP-206ENST00000537582 SFR1Q86XK3 245 aa17.37■□□□□ 0.37
SFSWAP-206ENST00000537582 DNAJC25Q9H1X3 360 aa17.37■□□□□ 0.37
SFSWAP-206ENST00000537582 PDLIM7Q9NR12 457 aa17.37■□□□□ 0.37
SFSWAP-206ENST00000537582 EXOC1Q9NV70 894 aa17.37■□□□□ 0.37
SFSWAP-206ENST00000537582 FRMD3A2A2Y4 597 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 RBAK-RBAKDNI3L0D1 243 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 HBP1O60381 514 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 RHOBTB3O94955 611 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 CCDC192P0DO97 292 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 CCL5P13501 91 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 CD44P16070 742 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 PSEN2P49810 448 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 POLGP54098 1239 aaPredicted RBP17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 NLRP12P59046 1061 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 STK4Q13043 487 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 EMC2Q15006 297 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 ANO6Q4KMQ2 910 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 BRDTQ58F21 947 aaPredicted RBP17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 FAM102BQ5T8I3 360 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 TMEM143Q96AN5 459 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 DHX33Q9H6R0 707 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 SPC25Q9HBM1 224 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 MAPK8IP1Q9UQF2 711 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 PVALEFA0A1B0GWK0 134 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 HAS3O00219 553 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 TBCAO75347 108 aaKnown RBP17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 ASGR1P07306 291 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 SMIM10L2AP0DMW4 78 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 SMIM10L2BP0DMW5 78 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 KCNB1Q14721 858 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 LRRC41Q15345 812 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 STX1AQ16623 288 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 FBXO46Q6PJ61 603 aaPredicted RBP17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 LRRC71Q8N4P6 559 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 KIAA0895Q8NCT3 520 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 BSNDQ8WZ55 320 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 TSPY26PQ9H489 355 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 ATP6V0A4Q9HBG4 840 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 SLC39A2Q9NP94 309 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 SETD4Q9NVD3 440 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 KCND2Q9NZV8 630 aa17.36■□□□□ 0.37
SFSWAP-206ENST00000537582 LOXHD1Q8IVV2 1947 aa17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 DGAT1O75907 488 aa17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 FAM13AO94988 1023 aa17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 CST5P28325 142 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 CASP5P51878 434 aa17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 PPFIA1Q13136 1202 aa17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 MKRN4PQ13434 485 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 GRIK4Q16099 956 aa17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 HERC4Q5GLZ8 1057 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 MARCH8Q5T0T0 291 aa17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 CCDC65Q8IXS2 484 aa17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 DEFB118Q96PH6 123 aa17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 MTG1Q9BT17 334 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 PAK6Q9NQU5 681 aaPredicted RBP17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 RMND1Q9NWS8 449 aa17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 PCDHA2Q9Y5H9 948 aa17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 FRMPD3Q5JV73 1810 aa17.35■□□□□ 0.37
SFSWAP-206ENST00000537582 MAFO75444 373 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-206ENST00000537582 C22orf31O95567 290 aa17.34■□□□□ 0.37
SFSWAP-206ENST00000537582 ZNF131P52739 623 aa17.34■□□□□ 0.37
SFSWAP-206ENST00000537582 ZNF200P98182 395 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-206ENST00000537582 TBC1D8BQ0IIM8 1120 aa17.34■□□□□ 0.37
SFSWAP-206ENST00000537582 ZNF658Q5TYW1 1059 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-206ENST00000537582 MYCT1Q8N699 235 aa17.34■□□□□ 0.37
SFSWAP-206ENST00000537582 LMBR1Q8WVP7 490 aa17.34■□□□□ 0.37
SFSWAP-206ENST00000537582 RNF208Q9H0X6 261 aa17.34■□□□□ 0.37
SFSWAP-206ENST00000537582 POLR3FQ9H1D9 316 aaPredicted RBP17.34■□□□□ 0.37
SFSWAP-206ENST00000537582 SUGCTQ9HAC7 445 aa17.34■□□□□ 0.37
SFSWAP-206ENST00000537582 ODF2LQ9ULJ1 636 aa17.34■□□□□ 0.37
SFSWAP-206ENST00000537582 MSCO60682 206 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 GJB1P08034 283 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 KLRC1P26715 233 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 NMT1P30419 496 aaKnown RBP17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 RFC5P40937 340 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 CLCN3P51790 818 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 FAM26FQ5R3K3 315 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 RNF180Q86T96 592 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 TRIML1Q8N9V2 468 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 ASAP3Q8TDY4 903 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 SLC7A3Q8WY07 619 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 ZNF333Q96JL9 665 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 FIZ1Q96SL8 496 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 KIFC3Q9BVG8 833 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 PARVGQ9HBI0 331 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 ANO10Q9NW15 660 aa17.33■□□□□ 0.37
SFSWAP-206ENST00000537582 GRIN2DO15399 1336 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 PPP1R3GB7ZBB8 358 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 MYBP10242 640 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 PRCPP42785 496 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 ACLYP53396 1101 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 NBPF20Q3BBV1 942 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 ZNF484Q5JVG2 852 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 ODR4Q5SWX8 454 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 RNF214Q8ND24 703 aa17.32■□□□□ 0.36
SFSWAP-206ENST00000537582 MCPH1Q8NEM0 835 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms