RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 OGFOD1Q8N543 542 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 ANKRD13CQ8N6S4 541 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 TSGA10Q9BZW7 698 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 ZFATQ9P243 1243 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 A0A1W2PRG0 241 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 DLGAP5Q15398 846 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 TATDN1Q6P1N9 297 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 KCNK18Q7Z418 384 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 SUPT20HQ8NEM7 779 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 NHEJ1Q9H9Q4 299 aaPredicted RBP15.2■□□□□ 0.02
LIG1-203ENST00000536218 NRXN2Q9P2S2 1712 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 A0A1B0GVG6 124 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 CCT8L1PA6NM43 557 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 RHOBTB3O94955 611 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 SPA17Q15506 151 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 CRELD2Q6UXH1 353 aaPredicted RBP15.2■□□□□ 0.02
LIG1-203ENST00000536218 PNMA5Q96PV4 448 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 LMCD1Q9NZU5 365 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 GGT7Q9UJ14 662 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 PCDHA12Q9UN75 941 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 STK38LQ9Y2H1 464 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 MYH8P13535 1937 aa15.2■□□□□ 0.02
LIG1-203ENST00000536218 MYMKA6NI61 221 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 LGR5O75473 907 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 TRIM21P19474 475 aaKnown RBP15.19■□□□□ 0.02
LIG1-203ENST00000536218 HOXA13P31271 388 aaPredicted RBP15.19■□□□□ 0.02
LIG1-203ENST00000536218 AMPD3Q01432 767 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 BLMHQ13867 455 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 CCDC84Q86UT8 332 aaPredicted RBP15.19■□□□□ 0.02
LIG1-203ENST00000536218 IRF2BP1Q8IU81 584 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 CSGALNACT2Q8N6G5 542 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 GIMAP8Q8ND71 665 aaPredicted RBP15.19■□□□□ 0.02
LIG1-203ENST00000536218 ACER1Q8TDN7 264 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 MKL1Q969V6 931 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 EPAS1Q99814 870 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 RAB34Q9BZG1 259 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 KDM4CQ9H3R0 1056 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 BLOC1S4Q9NUP1 217 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.19■□□□□ 0.025e-7■■■■□ 21.5
LIG1-203ENST00000536218 NOVA2Q9UNW9 492 aaKnown RBP15.19■□□□□ 0.02
LIG1-203ENST00000536218 SPDYE3A6NKU9 549 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 FKBP1AP62942 108 aaKnown RBP15.19■□□□□ 0.02
LIG1-203ENST00000536218 TAF11Q15544 211 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 CCDC197Q8NCU1 140 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 HAS1Q92839 578 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 AGPAT5Q9NUQ2 364 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 CHCHD3Q9NX63 227 aaKnown RBP15.19■□□□□ 0.02
LIG1-203ENST00000536218 SLC5A4Q9NY91 659 aa15.19■□□□□ 0.02
LIG1-203ENST00000536218 LIMA1Q9UHB6 759 aaKnown RBP15.19■□□□□ 0.02
LIG1-203ENST00000536218 H7C1D1 291 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 PYGBP11216 843 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 FERP16591 822 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 SLMAPQ14BN4 828 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 ECM1Q16610 540 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 RSBN1LQ6PCB5 846 aaPredicted RBP15.18■□□□□ 0.02
LIG1-203ENST00000536218 MFN1Q8IWA4 741 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 CCHCR1Q8TD31 782 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 DCAF4Q8WV16 495 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 LARP4BQ92615 738 aaKnown RBP15.18■□□□□ 0.02
LIG1-203ENST00000536218 PIDD1Q9HB75 910 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 TMBIM4Q9HC24 238 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 MAGEC2Q9UBF1 373 aaPredicted RBP15.18■□□□□ 0.02
LIG1-203ENST00000536218 HYOU1Q9Y4L1 999 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 BMP3P12645 472 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 STAT3P40763 770 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 ABL2P42684 1182 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 LRRC41Q15345 812 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 ANKRD40Q6AI12 368 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 ERICH1Q86X53 443 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 MDM1Q8TC05 714 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 KRT12Q99456 494 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 ANO3Q9BYT9 981 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 TAF1DQ9H5J8 278 aaPredicted RBP15.18■□□□□ 0.02
LIG1-203ENST00000536218 CNOT8Q9UFF9 292 aaKnown RBP15.18■□□□□ 0.02
LIG1-203ENST00000536218 DPPA5A6NC42 116 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 B4DLN1 442 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 CLK2P49760 499 aaKnown RBP15.18■□□□□ 0.02
LIG1-203ENST00000536218 KCNJ2P63252 427 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 SPAG1Q07617 926 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 CCDC170Q8IYT3 715 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 ANKS4BQ8N8V4 417 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 L3MBTL3Q96JM7 780 aaPredicted RBP15.18■□□□□ 0.02
LIG1-203ENST00000536218 ALS2CR12Q96Q35 445 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 TMEM39BQ9GZU3 492 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 CUEDC2Q9H467 287 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 RGL1Q9NZL6 768 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 TBC1D7Q9P0N9 293 aa15.18■□□□□ 0.02
LIG1-203ENST00000536218 SPDYE2BA6NHP3 402 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 USO1O60763 962 aaKnown RBP15.17■□□□□ 0.02
LIG1-203ENST00000536218 PDHA1P08559 390 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 CTNNA1P35221 906 aaKnown RBP15.17■□□□□ 0.02
LIG1-203ENST00000536218 ROR2Q01974 943 aaKnown RBP15.17■□□□□ 0.02
LIG1-203ENST00000536218 CACNB1Q02641 598 aaPredicted RBP15.17■□□□□ 0.02
LIG1-203ENST00000536218 PRR16Q569H4 304 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 HHATQ5VTY9 493 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 FBXO11Q86XK2 927 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 MTMR8Q96EF0 704 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 CCDC42Q96M95 316 aa15.17■□□□□ 0.02
LIG1-203ENST00000536218 P2RX7Q99572 595 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms