RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 CEP89Q96ST8 783 aa18.04■□□□□ 0.48
VAMP1-205ENST00000535927 PLIN2Q99541 437 aa18.04■□□□□ 0.48
VAMP1-205ENST00000535927 ATP6V0A4Q9HBG4 840 aa18.04■□□□□ 0.48
VAMP1-205ENST00000535927 PDLIM7Q9NR12 457 aa18.04■□□□□ 0.48
VAMP1-205ENST00000535927 MROH7Q68CQ1 1323 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 MBLAC1A4D2B0 266 aaPredicted RBP18.03■□□□□ 0.48
VAMP1-205ENST00000535927 TRAK2O60296 914 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 SMIM10L2AP0DMW4 78 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 SMIM10L2BP0DMW5 78 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 GAP43P17677 238 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 PTGS1P23219 599 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 POLGP54098 1239 aaPredicted RBP18.03■□□□□ 0.48
VAMP1-205ENST00000535927 MDM2Q00987 491 aaPredicted RBP18.03■□□□□ 0.48
VAMP1-205ENST00000535927 ITGA7Q13683 1181 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 POSTNQ15063 836 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 NBPF20Q3BBV1 942 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 CCDC183Q5T5S1 534 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 IER5Q5VY09 327 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 TAF2Q6P1X5 1199 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 GPBP1Q86WP2 473 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 NME8Q8N427 588 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 VTI1AQ96AJ9 217 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 TRIM9Q9C026 710 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 NUP62CLQ9H1M0 184 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 STARD7Q9NQZ5 370 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 RMND1Q9NWS8 449 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 SEL1LQ9UBV2 794 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 PCDHA2Q9Y5H9 948 aa18.03■□□□□ 0.48
VAMP1-205ENST00000535927 A0A1W2PQ45 241 aaPredicted RBP18.02■□□□□ 0.48
VAMP1-205ENST00000535927 A0A1W2PQY0 241 aa18.02■□□□□ 0.48
VAMP1-205ENST00000535927 C17orf102A2RUQ5 167 aa18.02■□□□□ 0.48
VAMP1-205ENST00000535927 SSBP05455 408 aaKnown RBP eCLIP18.02■□□□□ 0.48
VAMP1-205ENST00000535927 KRT18P05783 430 aaKnown RBP18.02■□□□□ 0.48
VAMP1-205ENST00000535927 MARK3P27448 753 aa18.02■□□□□ 0.48
VAMP1-205ENST00000535927 ADAM17P78536 824 aa18.02■□□□□ 0.48
VAMP1-205ENST00000535927 PSMD2Q13200 908 aa18.02■□□□□ 0.48
VAMP1-205ENST00000535927 MXD4Q14582 209 aaPredicted RBP18.02■□□□□ 0.48
VAMP1-205ENST00000535927 GRIK4Q16099 956 aa18.02■□□□□ 0.48
VAMP1-205ENST00000535927 MTERF2Q49AM1 385 aa18.02■□□□□ 0.48
VAMP1-205ENST00000535927 CCDC65Q8IXS2 484 aa18.02■□□□□ 0.48
VAMP1-205ENST00000535927 DDX12PQ92771 950 aa18.02■□□□□ 0.48
VAMP1-205ENST00000535927 MTRQ99707 1265 aa18.02■□□□□ 0.48
VAMP1-205ENST00000535927 GTF2IRD1Q9UHL9 959 aa18.02■□□□□ 0.48
VAMP1-205ENST00000535927 COL4A3BPQ9Y5P4 624 aa18.02■□□□□ 0.48
VAMP1-205ENST00000535927 PHLPP2Q6ZVD8 1323 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 ARID2Q68CP9 1835 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 SMIM35A0A1B0GVV1 85 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 ZBTB42B2RXF5 422 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 H0YCG3 227 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 ARVCFO00192 962 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 ZBTB39O15060 712 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 MYCNP04198 464 aaPredicted RBP18.01■□□□□ 0.47
VAMP1-205ENST00000535927 MAPTP10636 758 aaKnown RBP18.01■□□□□ 0.47
VAMP1-205ENST00000535927 KLRC1P26715 233 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 NPEPPSP55786 919 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 POU5F1BQ06416 359 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 KCNB1Q14721 858 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 PPP2R5AQ15172 486 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 TPRNQ4KMQ1 711 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 NT5DC1Q5TFE4 455 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 MTHFD1LQ6UB35 978 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 RPAINQ86UA6 219 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 TRIML1Q8N9V2 468 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 SPATA20Q8TB22 786 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 KCNN1Q92952 543 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 LARSQ9P2J5 1176 aaKnown RBP18.01■□□□□ 0.47
VAMP1-205ENST00000535927 HDAC6Q9UBN7 1215 aa18.01■□□□□ 0.47
VAMP1-205ENST00000535927 FRMD3A2A2Y4 597 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 MYMKA6NI61 221 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 CAND2O75155 1236 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 C22orf31O95567 290 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 COL6A1P12109 1028 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 ZNF131P52739 623 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 DPYDQ12882 1025 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 GIT2Q14161 759 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 EMC2Q15006 297 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 ARSHQ5FYA8 562 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 RBM43Q6ZSC3 357 aaKnown RBP18■□□□□ 0.47
VAMP1-205ENST00000535927 UNC13DQ70J99 1090 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 RSPH3Q86UC2 560 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 LRRC15Q8TF66 581 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 LMBR1Q8WVP7 490 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 TOX2Q96NM4 488 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 KIAA1468Q9P260 1216 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 TUBE1Q9UJT0 475 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 MYH11P35749 1972 aa18■□□□□ 0.47
VAMP1-205ENST00000535927 EVPLQ92817 2033 aa17.99■□□□□ 0.47
VAMP1-205ENST00000535927 TBCAO75347 108 aaKnown RBP17.99■□□□□ 0.47
VAMP1-205ENST00000535927 PPP1R2P41236 205 aa17.99■□□□□ 0.47
VAMP1-205ENST00000535927 AFMP43652 599 aa17.99■□□□□ 0.47
VAMP1-205ENST00000535927 CDK7P50613 346 aa17.99■□□□□ 0.47
VAMP1-205ENST00000535927 SMTNP53814 917 aa17.99■□□□□ 0.47
VAMP1-205ENST00000535927 IRX5P78411 483 aaPredicted RBP17.99■□□□□ 0.47
VAMP1-205ENST00000535927 DHX8Q14562 1220 aaKnown RBP17.99■□□□□ 0.47
VAMP1-205ENST00000535927 PLA2G4FQ68DD2 849 aa17.99■□□□□ 0.47
VAMP1-205ENST00000535927 NECAB2Q7Z6G3 386 aa17.99■□□□□ 0.47
VAMP1-205ENST00000535927 SMARCE1Q969G3 411 aa17.99■□□□□ 0.47
VAMP1-205ENST00000535927 DNAJC19Q96DA6 116 aa17.99■□□□□ 0.47
VAMP1-205ENST00000535927 IFT74Q96LB3 600 aa17.99■□□□□ 0.47
VAMP1-205ENST00000535927 MAP7D2Q96T17 732 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms