RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 GOLGA6L22H0YM25 854 aa7.11□□□□□ -1.27
VBP1-203ENST00000535916 SLC26A4O43511 780 aa7.11□□□□□ -1.27
VBP1-203ENST00000535916 APPP05067 770 aa7.11□□□□□ -1.27
VBP1-203ENST00000535916 KCNA6P17658 529 aa7.11□□□□□ -1.27
VBP1-203ENST00000535916 HIBADHP31937 336 aaKnown RBP7.11□□□□□ -1.27
VBP1-203ENST00000535916 LRP10Q7Z4F1 713 aa7.11□□□□□ -1.27
VBP1-203ENST00000535916 FGD2Q7Z6J4 655 aa7.11□□□□□ -1.27
VBP1-203ENST00000535916 BCL6BQ8N143 479 aaPredicted RBP7.11□□□□□ -1.27
VBP1-203ENST00000535916 SHCBP1Q8NEM2 672 aa7.11□□□□□ -1.27
VBP1-203ENST00000535916 DNAJC7Q99615 494 aa7.11□□□□□ -1.27
VBP1-203ENST00000535916 TCRBV16S1A1N1A0A5B0 115 aa7.1□□□□□ -1.27
VBP1-203ENST00000535916 APEX1P27695 318 aaKnown RBP7.1□□□□□ -1.27
VBP1-203ENST00000535916 TGFB2P61812 414 aa7.1□□□□□ -1.27
VBP1-203ENST00000535916 TMEM177Q53S58 311 aa7.1□□□□□ -1.27
VBP1-203ENST00000535916 SGMS1Q86VZ5 419 aa7.1□□□□□ -1.27
VBP1-203ENST00000535916 D2HGDHQ8N465 521 aa7.1□□□□□ -1.27
VBP1-203ENST00000535916 IGSF22Q8N9C0 903 aa7.1□□□□□ -1.27
VBP1-203ENST00000535916 CALML6Q8TD86 181 aa7.1□□□□□ -1.27
VBP1-203ENST00000535916 HIP1RO75146 1068 aa7.09□□□□□ -1.27
VBP1-203ENST00000535916 MCM7P33993 719 aa7.09□□□□□ -1.27
VBP1-203ENST00000535916 IRF9Q00978 393 aa7.09□□□□□ -1.27
VBP1-203ENST00000535916 ADAM15Q13444 863 aa7.09□□□□□ -1.27
VBP1-203ENST00000535916 RTN4RL1Q86UN2 441 aaPredicted RBP7.09□□□□□ -1.27
VBP1-203ENST00000535916 C2orf69Q8N8R5 385 aa7.09□□□□□ -1.27
VBP1-203ENST00000535916 PMS2P1A4D2B8 440 aa7.08□□□□□ -1.28
VBP1-203ENST00000535916 MAFO75444 373 aaPredicted RBP7.08□□□□□ -1.28
VBP1-203ENST00000535916 STAT3P40763 770 aa7.08□□□□□ -1.28
VBP1-203ENST00000535916 ALDH6A1Q02252 535 aaKnown RBP7.08□□□□□ -1.28
VBP1-203ENST00000535916 HHEXQ03014 270 aa7.08□□□□□ -1.28
VBP1-203ENST00000535916 RBL2Q08999 1139 aa7.08□□□□□ -1.28
VBP1-203ENST00000535916 RIN1Q13671 783 aa7.08□□□□□ -1.28
VBP1-203ENST00000535916 SAFB2Q14151 953 aaKnown RBP eCLIP7.08□□□□□ -1.28
VBP1-203ENST00000535916 SPTY2D1Q68D10 685 aaPredicted RBP7.08□□□□□ -1.28
VBP1-203ENST00000535916 ADGRE4PQ86SQ3 457 aa7.08□□□□□ -1.28
VBP1-203ENST00000535916 JMYQ8N9B5 988 aa7.08□□□□□ -1.28
VBP1-203ENST00000535916 ZSWIM2Q8NEG5 633 aa7.08□□□□□ -1.28
VBP1-203ENST00000535916 ARMC5Q96C12 935 aa7.08□□□□□ -1.28
VBP1-203ENST00000535916 FOXRED1Q96CU9 486 aaPredicted RBP7.08□□□□□ -1.28
VBP1-203ENST00000535916 SRPK1Q96SB4 655 aaKnown RBP7.08□□□□□ -1.28
VBP1-203ENST00000535916 MRPL4Q9BYD3 311 aaKnown RBP7.08□□□□□ -1.28
VBP1-203ENST00000535916 TRIM8Q9BZR9 551 aa7.08□□□□□ -1.28
VBP1-203ENST00000535916 CTDP1Q9Y5B0 961 aaPredicted RBP7.08□□□□□ -1.28
VBP1-203ENST00000535916 CAPN14A8MX76 684 aa7.07□□□□□ -1.28
VBP1-203ENST00000535916 KCNQ2O43526 872 aa7.07□□□□□ -1.28
VBP1-203ENST00000535916 ZBTB48P10074 688 aaPredicted RBP7.07□□□□□ -1.28
VBP1-203ENST00000535916 MAP3K12Q12852 859 aa7.07□□□□□ -1.28
VBP1-203ENST00000535916 ACAP1Q15027 740 aa7.07□□□□□ -1.28
VBP1-203ENST00000535916 FNDC7Q5VTL7 733 aa7.07□□□□□ -1.28
VBP1-203ENST00000535916 CHFRQ96EP1 664 aa7.07□□□□□ -1.28
VBP1-203ENST00000535916 C8orf37Q96NL8 207 aa7.07□□□□□ -1.28
VBP1-203ENST00000535916 TRIM39Q9HCM9 518 aa7.07□□□□□ -1.28
VBP1-203ENST00000535916 MAGEL2Q9UJ55 1249 aa7.07□□□□□ -1.28
VBP1-203ENST00000535916 KRT37O76014 449 aa7.06□□□□□ -1.28
VBP1-203ENST00000535916 NPTXRO95502 500 aa7.06□□□□□ -1.28
VBP1-203ENST00000535916 ATP2C1P98194 919 aaPredicted RBP7.06□□□□□ -1.28
VBP1-203ENST00000535916 TUBA3CQ13748 450 aa7.06□□□□□ -1.28
VBP1-203ENST00000535916 TUBA3EQ6PEY2 450 aa7.06□□□□□ -1.28
VBP1-203ENST00000535916 AMER2Q8N7J2 671 aa7.06□□□□□ -1.28
VBP1-203ENST00000535916 THAP3Q8WTV1 239 aaPredicted RBP7.06□□□□□ -1.28
VBP1-203ENST00000535916 NEU4Q8WWR8 484 aaPredicted RBP7.06□□□□□ -1.28
VBP1-203ENST00000535916 FOXB1Q99853 325 aa7.06□□□□□ -1.28
VBP1-203ENST00000535916 BOCQ9BWV1 1114 aa7.06□□□□□ -1.28
VBP1-203ENST00000535916 CEP72Q9P209 647 aa7.06□□□□□ -1.28
VBP1-203ENST00000535916 GIT1Q9Y2X7 761 aa7.06□□□□□ -1.28
VBP1-203ENST00000535916 VWA7Q9Y334 891 aa7.06□□□□□ -1.28
VBP1-203ENST00000535916 PTCH2Q9Y6C5 1203 aa7.06□□□□□ -1.28
VBP1-203ENST00000535916 CC2D1AQ6P1N0 951 aaPredicted RBP7.05□□□□□ -1.28
VBP1-203ENST00000535916 KLHDC10Q6PID8 442 aa7.05□□□□□ -1.28
VBP1-203ENST00000535916 OTOP1Q7RTM1 612 aa7.05□□□□□ -1.28
VBP1-203ENST00000535916 ZNF703Q9H7S9 590 aaPredicted RBP7.05□□□□□ -1.28
VBP1-203ENST00000535916 MMRN2Q9H8L6 949 aa7.05□□□□□ -1.28
VBP1-203ENST00000535916 AURKAIP1Q9NWT8 199 aaPredicted RBP7.05□□□□□ -1.28
VBP1-203ENST00000535916 SH3BP1Q9Y3L3 701 aa7.05□□□□□ -1.28
VBP1-203ENST00000535916 WDR33Q9C0J8 1336 aaKnown RBP7.04□□□□□ -1.28
VBP1-203ENST00000535916 CCDC163A0A0D9SF12 145 aa7.04□□□□□ -1.28
VBP1-203ENST00000535916 A0A1W2PRX2 142 aa7.04□□□□□ -1.28
VBP1-203ENST00000535916 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
VBP1-203ENST00000535916 RGS3P49796 1198 aa7.04□□□□□ -1.28
VBP1-203ENST00000535916 TMPRSS6Q8IU80 811 aa7.04□□□□□ -1.28
VBP1-203ENST00000535916 RABGGTAQ92696 567 aa7.04□□□□□ -1.28
VBP1-203ENST00000535916 IKZF4Q9H2S9 585 aa7.04□□□□□ -1.28
VBP1-203ENST00000535916 NCOA5Q9HCD5 579 aaKnown RBP7.04□□□□□ -1.28
VBP1-203ENST00000535916 SAE1Q9UBE0 346 aaPredicted RBP7.04□□□□□ -1.28
VBP1-203ENST00000535916 M0R2C6 588 aa7.03□□□□□ -1.28
VBP1-203ENST00000535916 PRLP01236 227 aa7.03□□□□□ -1.28
VBP1-203ENST00000535916 MECP2P51608 486 aaKnown RBP7.03□□□□□ -1.28
VBP1-203ENST00000535916 ADCY7P51828 1080 aa7.03□□□□□ -1.28
VBP1-203ENST00000535916 ANTXR2P58335 489 aa7.03□□□□□ -1.28
VBP1-203ENST00000535916 SLC6A3Q01959 620 aa7.03□□□□□ -1.28
VBP1-203ENST00000535916 DPTQ07507 201 aa7.03□□□□□ -1.28
VBP1-203ENST00000535916 CRHR2Q13324 411 aa7.03□□□□□ -1.28
VBP1-203ENST00000535916 RRP1BQ14684 758 aaKnown RBP7.03□□□□□ -1.28
VBP1-203ENST00000535916 C2orf27AQ580R0 203 aa7.03□□□□□ -1.28
VBP1-203ENST00000535916 THEMISQ8N1K5 641 aaPredicted RBP7.03□□□□□ -1.28
VBP1-203ENST00000535916 OR5AN1Q8NGI8 311 aa7.03□□□□□ -1.28
VBP1-203ENST00000535916 ZNF483Q8TF39 744 aaPredicted RBP7.03□□□□□ -1.28
VBP1-203ENST00000535916 MKL1Q969V6 931 aa7.03□□□□□ -1.28
VBP1-203ENST00000535916 SLC7A6OSQ96CW6 309 aaPredicted RBP7.03□□□□□ -1.28
VBP1-203ENST00000535916 MPHOSPH9Q99550 1183 aa7.03□□□□□ -1.28
VBP1-203ENST00000535916 DENND2AQ9ULE3 1009 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms