RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 NME8Q8N427 588 aa18.43■□□□□ 0.54
ATL3-202ENST00000535789 ZNF579Q8NAF0 562 aaKnown RBP18.43■□□□□ 0.54
ATL3-202ENST00000535789 GDPD5Q8WTR4 605 aa18.43■□□□□ 0.54
ATL3-202ENST00000535789 C8orf76Q96K31 380 aa18.43■□□□□ 0.54
ATL3-202ENST00000535789 ZNF668Q96K58 619 aaPredicted RBP18.43■□□□□ 0.54
ATL3-202ENST00000535789 C17orf80Q9BSJ5 609 aa18.43■□□□□ 0.54
ATL3-202ENST00000535789 NIFKQ9BYG3 293 aaKnown RBP18.43■□□□□ 0.54
ATL3-202ENST00000535789 TMEM60Q9H2L4 133 aa18.43■□□□□ 0.54
ATL3-202ENST00000535789 CEP131Q9UPN4 1083 aa18.43■□□□□ 0.54
ATL3-202ENST00000535789 MYH15Q9Y2K3 1946 aa18.43■□□□□ 0.54
ATL3-202ENST00000535789 M0QZ92 97 aa18.42■□□□□ 0.54
ATL3-202ENST00000535789 MTERF2Q49AM1 385 aa18.42■□□□□ 0.54
ATL3-202ENST00000535789 EFCAB12Q6NXP0 572 aa18.42■□□□□ 0.54
ATL3-202ENST00000535789 METTL13Q8N6R0 699 aa18.42■□□□□ 0.54
ATL3-202ENST00000535789 FBXO18Q8NFZ0 1043 aa18.42■□□□□ 0.54
ATL3-202ENST00000535789 MTMR9Q96QG7 549 aa18.42■□□□□ 0.54
ATL3-202ENST00000535789 ADAMTS10Q9H324 1103 aa18.42■□□□□ 0.54
ATL3-202ENST00000535789 MTUS1Q9ULD2 1270 aa18.42■□□□□ 0.54
ATL3-202ENST00000535789 GINS2Q9Y248 185 aa18.42■□□□□ 0.54
ATL3-202ENST00000535789 TCF20Q9UGU0 1960 aaKnown RBP18.42■□□□□ 0.54
ATL3-202ENST00000535789 CUL9Q8IWT3 2517 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 IGKV6-21A0A0C4DH24 114 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 IGFBP4P22692 258 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 ERVK-21P61565 698 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 PAK2Q13177 524 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 GRB10Q13322 594 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 TRIM29Q14134 588 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 XKR3Q5GH77 459 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 NCAPH2Q6IBW4 605 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.41■□□□□ 0.54
ATL3-202ENST00000535789 SLC17A8Q8NDX2 589 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 TMX3Q96JJ7 454 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 NAP1L4Q99733 375 aaKnown RBP18.41■□□□□ 0.54
ATL3-202ENST00000535789 LXNQ9BS40 222 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 TSPYL2Q9H2G4 693 aaPredicted RBP18.41■□□□□ 0.54
ATL3-202ENST00000535789 RGL1Q9NZL6 768 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 INSL6Q9Y581 213 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 MTCH2Q9Y6C9 303 aa18.41■□□□□ 0.54
ATL3-202ENST00000535789 ZBTB39O15060 712 aa18.4■□□□□ 0.54
ATL3-202ENST00000535789 MAGEB2O15479 319 aa18.4■□□□□ 0.54
ATL3-202ENST00000535789 NPEPPSP55786 919 aa18.4■□□□□ 0.54
ATL3-202ENST00000535789 PSMC5P62195 406 aa18.4■□□□□ 0.54
ATL3-202ENST00000535789 HMGN5P82970 282 aaKnown RBP18.4■□□□□ 0.54
ATL3-202ENST00000535789 ZNF689Q96CS4 500 aaPredicted RBP18.4■□□□□ 0.54
ATL3-202ENST00000535789 DYDC2Q96IM9 177 aa18.4■□□□□ 0.54
ATL3-202ENST00000535789 SUGCTQ9HAC7 445 aa18.4■□□□□ 0.54
ATL3-202ENST00000535789 NRBP2Q9NSY0 501 aa18.4■□□□□ 0.54
ATL3-202ENST00000535789 NEMFO60524 1076 aa18.39■□□□□ 0.53
ATL3-202ENST00000535789 RPS6KA5O75582 802 aa18.39■□□□□ 0.53
ATL3-202ENST00000535789 POU3F3P20264 500 aaPredicted RBP18.39■□□□□ 0.53
ATL3-202ENST00000535789 QARSP47897 775 aaKnown RBP18.39■□□□□ 0.53
ATL3-202ENST00000535789 GATMP50440 423 aa18.39■□□□□ 0.53
ATL3-202ENST00000535789 GPC3P51654 580 aa18.39■□□□□ 0.53
ATL3-202ENST00000535789 CRYBB1P53674 252 aaPredicted RBP18.39■□□□□ 0.53
ATL3-202ENST00000535789 NLRP11P59045 1033 aaKnown RBP18.39■□□□□ 0.53
ATL3-202ENST00000535789 CYP4A11Q02928 519 aa18.39■□□□□ 0.53
ATL3-202ENST00000535789 TBC1D8BQ0IIM8 1120 aa18.39■□□□□ 0.53
ATL3-202ENST00000535789 NBR1Q14596 966 aa18.39■□□□□ 0.53
ATL3-202ENST00000535789 EPHA7Q15375 998 aa18.39■□□□□ 0.53
ATL3-202ENST00000535789 CCDC85BQ15834 202 aaPredicted RBP18.39■□□□□ 0.53
ATL3-202ENST00000535789 CALCRLQ16602 461 aa18.39■□□□□ 0.53
ATL3-202ENST00000535789 PPM1EQ8WY54 764 aa18.39■□□□□ 0.53
ATL3-202ENST00000535789 TGS1Q96RS0 853 aaKnown RBP18.39■□□□□ 0.53
ATL3-202ENST00000535789 YME1L1Q96TA2 773 aa18.39■□□□□ 0.53
ATL3-202ENST00000535789 FOXP1Q9H334 677 aaPredicted RBP18.39■□□□□ 0.53
ATL3-202ENST00000535789 ST3GAL5Q9UNP4 418 aa18.39■□□□□ 0.53
ATL3-202ENST00000535789 AKT3Q9Y243 479 aa18.39■□□□□ 0.53
ATL3-202ENST00000535789 ADGRA3Q8IWK6 1321 aa18.39■□□□□ 0.53
ATL3-202ENST00000535789 POTEMA6NI47 508 aa18.38■□□□□ 0.53
ATL3-202ENST00000535789 ST18O60284 1047 aa18.38■□□□□ 0.53
ATL3-202ENST00000535789 P4HBP07237 508 aaKnown RBP18.38■□□□□ 0.53
ATL3-202ENST00000535789 NFX1Q12986 1120 aaKnown RBP18.38■□□□□ 0.53
ATL3-202ENST00000535789 CTTNQ14247 550 aaKnown RBP18.38■□□□□ 0.53
ATL3-202ENST00000535789 DSC3Q14574 896 aa18.38■□□□□ 0.53
ATL3-202ENST00000535789 SLFN12Q8IYM2 578 aa18.38■□□□□ 0.53
ATL3-202ENST00000535789 CYP26B1Q9NR63 512 aa18.38■□□□□ 0.53
ATL3-202ENST00000535789 DDX11L8A8MPP1 907 aa18.37■□□□□ 0.53
ATL3-202ENST00000535789 MAFO75444 373 aaPredicted RBP18.37■□□□□ 0.53
ATL3-202ENST00000535789 DGKIO75912 1065 aa18.37■□□□□ 0.53
ATL3-202ENST00000535789 ATP2B1P20020 1258 aa18.37■□□□□ 0.53
ATL3-202ENST00000535789 MCM7P33993 719 aa18.37■□□□□ 0.53
ATL3-202ENST00000535789 NOSTRINQ8IVI9 506 aa18.37■□□□□ 0.53
ATL3-202ENST00000535789 C4orf19Q8IY42 314 aa18.37■□□□□ 0.53
ATL3-202ENST00000535789 MAP7D2Q96T17 732 aa18.37■□□□□ 0.53
ATL3-202ENST00000535789 FTHL17Q9BXU8 183 aa18.37■□□□□ 0.53
ATL3-202ENST00000535789 TTC12Q9H892 705 aaPredicted RBP18.37■□□□□ 0.53
ATL3-202ENST00000535789 MYH11P35749 1972 aa18.37■□□□□ 0.53
ATL3-202ENST00000535789 C9IYK1 514 aa18.36■□□□□ 0.53
ATL3-202ENST00000535789 CSDE1O75534 798 aaKnown RBP18.36■□□□□ 0.53
ATL3-202ENST00000535789 SLITRK3O94933 977 aa18.36■□□□□ 0.53
ATL3-202ENST00000535789 FGFR4P22455 802 aa18.36■□□□□ 0.53
ATL3-202ENST00000535789 TXKP42681 527 aa18.36■□□□□ 0.53
ATL3-202ENST00000535789 TOB1P50616 345 aaPredicted RBP18.36■□□□□ 0.53
ATL3-202ENST00000535789 EPC2Q52LR7 807 aa18.36■□□□□ 0.53
ATL3-202ENST00000535789 KSR1Q8IVT5 923 aa18.36■□□□□ 0.53
ATL3-202ENST00000535789 MICALL1Q8N3F8 863 aa18.36■□□□□ 0.53
ATL3-202ENST00000535789 FAM184AQ8NB25 1140 aa18.36■□□□□ 0.53
ATL3-202ENST00000535789 HSD17B14Q9BPX1 270 aa18.36■□□□□ 0.53
ATL3-202ENST00000535789 EIF2AK1Q9BQI3 630 aaKnown RBP18.36■□□□□ 0.53
ATL3-202ENST00000535789 DHX33Q9H6R0 707 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms