RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CHMP5Q9NZZ3 219 aa13.46□□□□□ -0.25
CHD4-203ENST00000535717 DBR1Q9UK59 544 aaKnown RBP13.46□□□□□ -0.25
CHD4-203ENST00000535717 PPME1Q9Y570 386 aa13.46□□□□□ -0.25
CHD4-203ENST00000535717 ARID2Q68CP9 1835 aa13.46□□□□□ -0.26
CHD4-203ENST00000535717 KDM3AQ9Y4C1 1321 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 E9PMD0 336 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 SLC26A4O43511 780 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 CUTAO60888 179 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 CHRNA1P02708 482 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 CTSHP09668 335 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 CSF2RAP15509 400 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 RFC5P40937 340 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 ME1P48163 572 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 POLGP54098 1239 aaPredicted RBP13.45□□□□□ -0.26
CHD4-203ENST00000535717 TMEM62Q0P6H9 643 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 DRP2Q13474 957 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 MBTPS1Q14703 1052 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 GPNMBQ14956 572 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 KARSQ15046 597 aaKnown RBP13.45□□□□□ -0.26
CHD4-203ENST00000535717 TMEM119Q4V9L6 283 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 FAM26DQ5JW98 314 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 AXDND1Q5T1B0 1012 aaPredicted RBP13.45□□□□□ -0.26
CHD4-203ENST00000535717 RSPH3Q86UC2 560 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 NME8Q8N427 588 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 TMEM199Q8N511 208 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 VWCEQ96DN2 955 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 CDK5RAP3Q96JB5 506 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 SPATA32Q96LK8 384 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 CCSER1Q9C0I3 900 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 BMP2KQ9NSY1 1161 aaPredicted RBP13.45□□□□□ -0.26
CHD4-203ENST00000535717 PCDHA7Q9UN72 937 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 DNM3Q9UQ16 869 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 TCHHQ07283 1943 aa13.45□□□□□ -0.26
CHD4-203ENST00000535717 TANC1Q9C0D5 1861 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 RSPH10B2B2RC85 870 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 EYA4O95677 639 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 VTNP04004 478 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 RPLP2P05387 115 aaKnown RBP13.44□□□□□ -0.26
CHD4-203ENST00000535717 RSPH10BP0C881 870 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 TMOD1P28289 359 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 EPHB4P54760 987 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 MRPS6P82932 125 aaKnown RBP13.44□□□□□ -0.26
CHD4-203ENST00000535717 FPGSQ05932 587 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 MGAT3Q09327 533 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 EMC2Q15006 297 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 EXOC8Q8IYI6 725 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 LRRC15Q8TF66 581 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 SLC7A3Q8WY07 619 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 CALML4Q96GE6 196 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 CCDC43Q96MW1 224 aaKnown RBP13.44□□□□□ -0.26
CHD4-203ENST00000535717 GDF15Q99988 308 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 JPH2Q9BR39 696 aaPredicted RBP13.44□□□□□ -0.26
CHD4-203ENST00000535717 OSBPL7Q9BZF2 842 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 SCAND2PQ9GZW5 306 aaPredicted RBP13.44□□□□□ -0.26
CHD4-203ENST00000535717 NT5C3AQ9H0P0 336 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 BHMT2Q9H2M3 363 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 XPNPEP1Q9NQW7 623 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 SCN5AQ14524 2016 aa13.44□□□□□ -0.26
CHD4-203ENST00000535717 ARHGEF35A5YM69 484 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 USO1O60763 962 aaKnown RBP13.43□□□□□ -0.26
CHD4-203ENST00000535717 NBNO60934 754 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 DGAT1O75907 488 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 PLCG1P19174 1290 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 RFC2P35250 354 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 IER5Q5VY09 327 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 SHC4Q6S5L8 630 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 PADI6Q6TGC4 694 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 C16orf59Q7L2K0 433 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 KCTD17Q8N5Z5 321 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 TMEM143Q96AN5 459 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 MAP7D2Q96T17 732 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 CDHR5Q9HBB8 845 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 GDPD2Q9HCC8 539 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 SUCLA2Q9P2R7 463 aaPredicted RBP13.43□□□□□ -0.26
CHD4-203ENST00000535717 AKT3Q9Y243 479 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 CDY2AQ9Y6F7 541 aa13.43□□□□□ -0.26
CHD4-203ENST00000535717 A0A087X0B3 334 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 GPR32O75388 356 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 PLA2G4BP0C869 781 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 ACRP10323 421 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 TXLNAP40222 546 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 DNM2P50570 870 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 PPIGQ13427 754 aaKnown RBP eCLIP13.42□□□□□ -0.263e-6■□□□□ 9.8
CHD4-203ENST00000535717 KIZQ2M2Z5 673 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 DEFB128Q7Z7B8 93 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 RASSF8Q8NHQ8 419 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 PRPF31Q8WWY3 499 aaKnown RBP13.42□□□□□ -0.26
CHD4-203ENST00000535717 PPP1R16BQ96T49 567 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 MTRQ99707 1265 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 PANK2Q9BZ23 570 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 CELF4Q9BZC1 486 aaKnown RBP13.42□□□□□ -0.26
CHD4-203ENST00000535717 ATP6V0A4Q9HBG4 840 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 IL23AQ9NPF7 189 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 BLOC1S4Q9NUP1 217 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 CCDC39Q9UFE4 941 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 TRPV2Q9Y5S1 764 aa13.42□□□□□ -0.26
CHD4-203ENST00000535717 SIP14410 1827 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 M0QZ92 97 aa13.41□□□□□ -0.26
CHD4-203ENST00000535717 GAS2O43903 313 aaKnown RBP13.41□□□□□ -0.26
CHD4-203ENST00000535717 PARNO95453 639 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms