RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 RPS6KA5O75582 802 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 SLITRK3O94933 977 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 LYPLA2O95372 231 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 VTNP04004 478 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 MUTP22033 750 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 DNAJB2P25686 324 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 CRYBB1P53674 252 aaPredicted RBP24.41■■□□□ 1.5
SSPN-204ENST00000535504 BECN1Q14457 450 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 PDIA5Q14554 519 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 LPIN1Q14693 890 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 GPNMBQ14956 572 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 KRT79Q5XKE5 535 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 NLRP7Q8WX94 980 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 TIFAQ96CG3 184 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 NACC1Q96RE7 527 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 HSD17B14Q9BPX1 270 aa24.41■■□□□ 1.5
SSPN-204ENST00000535504 POLR3CQ9BUI4 534 aaPredicted RBP24.41■■□□□ 1.5
SSPN-204ENST00000535504 ZSCAN16Q9H4T2 348 aaPredicted RBP24.41■■□□□ 1.5
SSPN-204ENST00000535504 RNF216Q9NWF9 866 aaPredicted RBP24.41■■□□□ 1.5
SSPN-204ENST00000535504 RANBP2P49792 3224 aaKnown RBP24.4■■□□□ 1.5
SSPN-204ENST00000535504 XRCC6P12956 609 aaKnown RBP eCLIP24.4■■□□□ 1.5
SSPN-204ENST00000535504 CCT6AP40227 531 aaKnown RBP24.4■■□□□ 1.5
SSPN-204ENST00000535504 KIZQ2M2Z5 673 aa24.4■■□□□ 1.5
SSPN-204ENST00000535504 ARL6IP4Q66PJ3 421 aaKnown RBP24.4■■□□□ 1.5
SSPN-204ENST00000535504 FAM109BQ6ICB4 259 aaPredicted RBP24.4■■□□□ 1.5
SSPN-204ENST00000535504 MYOCDQ8IZQ8 938 aa24.4■■□□□ 1.5
SSPN-204ENST00000535504 VWCEQ96DN2 955 aa24.4■■□□□ 1.5
SSPN-204ENST00000535504 PPP1R16BQ96T49 567 aa24.4■■□□□ 1.5
SSPN-204ENST00000535504 PCDHA11Q9Y5I1 949 aa24.4■■□□□ 1.5
SSPN-204ENST00000535504 TMEM150BA6NC51 233 aa24.39■■□□□ 1.49
SSPN-204ENST00000535504 RPA1P27694 616 aa24.39■■□□□ 1.49
SSPN-204ENST00000535504 NLRP11P59045 1033 aaKnown RBP24.39■■□□□ 1.49
SSPN-204ENST00000535504 ATP2C1P98194 919 aaPredicted RBP24.39■■□□□ 1.49
SSPN-204ENST00000535504 NFX1Q12986 1120 aaKnown RBP24.39■■□□□ 1.49
SSPN-204ENST00000535504 DEFB123Q8N688 67 aa24.39■■□□□ 1.49
SSPN-204ENST00000535504 SNX29Q8TEQ0 813 aa24.39■■□□□ 1.49
SSPN-204ENST00000535504 OSMRQ99650 979 aa24.39■■□□□ 1.49
SSPN-204ENST00000535504 MTRQ99707 1265 aa24.39■■□□□ 1.49
SSPN-204ENST00000535504 SH2D3AQ9BRG2 576 aa24.39■■□□□ 1.49
SSPN-204ENST00000535504 PBX4Q9BYU1 374 aa24.39■■□□□ 1.49
SSPN-204ENST00000535504 INO80BQ9C086 356 aaPredicted RBP24.39■■□□□ 1.49
SSPN-204ENST00000535504 SLC28A3Q9HAS3 691 aa24.39■■□□□ 1.49
SSPN-204ENST00000535504 SUCLA2Q9P2R7 463 aaPredicted RBP24.39■■□□□ 1.49
SSPN-204ENST00000535504 TLL1O43897 1013 aa24.38■■□□□ 1.49
SSPN-204ENST00000535504 DGAT1O75907 488 aa24.38■■□□□ 1.49
SSPN-204ENST00000535504 STBD1O95210 358 aa24.38■■□□□ 1.49
SSPN-204ENST00000535504 CD52P31358 61 aa24.38■■□□□ 1.49
SSPN-204ENST00000535504 NPEPPSP55786 919 aa24.38■■□□□ 1.49
SSPN-204ENST00000535504 HERC6Q8IVU3 1022 aa24.38■■□□□ 1.49
SSPN-204ENST00000535504 C4orf32Q8N8J7 132 aa24.38■■□□□ 1.49
SSPN-204ENST00000535504 PSPC1Q8WXF1 523 aaKnown RBP24.38■■□□□ 1.49
SSPN-204ENST00000535504 CDK5RAP3Q96JB5 506 aa24.38■■□□□ 1.49
SSPN-204ENST00000535504 GCOM2Q9BZD3 368 aaPredicted RBP24.38■■□□□ 1.49
SSPN-204ENST00000535504 ATP6V0A4Q9HBG4 840 aa24.38■■□□□ 1.49
SSPN-204ENST00000535504 GRXCR1A8MXD5 290 aa24.37■■□□□ 1.49
SSPN-204ENST00000535504 EMC2Q15006 297 aa24.37■■□□□ 1.49
SSPN-204ENST00000535504 CATSPER3Q86XQ3 398 aa24.37■■□□□ 1.49
SSPN-204ENST00000535504 RHPN2Q8IUC4 686 aa24.37■■□□□ 1.49
SSPN-204ENST00000535504 WRAP73Q9P2S5 460 aaPredicted RBP24.37■■□□□ 1.49
SSPN-204ENST00000535504 PADI3Q9ULW8 664 aa24.37■■□□□ 1.49
SSPN-204ENST00000535504 IGKV6-21A0A0C4DH24 114 aa24.36■■□□□ 1.49
SSPN-204ENST00000535504 DENND3A2RUS2 1198 aa24.36■■□□□ 1.49
SSPN-204ENST00000535504 ARHGEF35A5YM69 484 aa24.36■■□□□ 1.49
SSPN-204ENST00000535504 ZNF410Q86VK4 478 aa24.36■■□□□ 1.49
SSPN-204ENST00000535504 LINC01465Q8N7H1 131 aa24.36■■□□□ 1.49
SSPN-204ENST00000535504 MICAL3Q7RTP6 2002 aa24.35■■□□□ 1.49
SSPN-204ENST00000535504 VWA3AA6NCI4 1184 aa24.35■■□□□ 1.49
SSPN-204ENST00000535504 ASAP2O43150 1006 aa24.35■■□□□ 1.49
SSPN-204ENST00000535504 GPR32O75388 356 aa24.35■■□□□ 1.49
SSPN-204ENST00000535504 MED24O75448 989 aa24.35■■□□□ 1.49
SSPN-204ENST00000535504 ZSCAN20P17040 1043 aaPredicted RBP24.35■■□□□ 1.49
SSPN-204ENST00000535504 GPC3P51654 580 aa24.35■■□□□ 1.49
SSPN-204ENST00000535504 RABGGTBP53611 331 aa24.35■■□□□ 1.49
SSPN-204ENST00000535504 TFDP1Q14186 410 aa24.35■■□□□ 1.49
SSPN-204ENST00000535504 PPP2R2DQ66LE6 453 aa24.35■■□□□ 1.49
SSPN-204ENST00000535504 IGSF22Q8N9C0 903 aa24.35■■□□□ 1.49
SSPN-204ENST00000535504 RASSF8Q8NHQ8 419 aa24.35■■□□□ 1.49
SSPN-204ENST00000535504 PIGOQ8TEQ8 1089 aa24.35■■□□□ 1.49
SSPN-204ENST00000535504 DHX33Q9H6R0 707 aaKnown RBP24.35■■□□□ 1.49
SSPN-204ENST00000535504 DBR1Q9UK59 544 aaKnown RBP24.35■■□□□ 1.49
SSPN-204ENST00000535504 STAG3L1P0CL83 205 aa24.34■■□□□ 1.49
SSPN-204ENST00000535504 SFPQP23246 707 aaKnown RBP eCLIP24.34■■□□□ 1.49
SSPN-204ENST00000535504 EIF4BP23588 611 aaKnown RBP24.34■■□□□ 1.49
SSPN-204ENST00000535504 RARRES1P49788 294 aa24.34■■□□□ 1.49
SSPN-204ENST00000535504 DEFB103AP81534 67 aa24.34■■□□□ 1.49
SSPN-204ENST00000535504 MXD4Q14582 209 aaPredicted RBP24.34■■□□□ 1.49
SSPN-204ENST00000535504 SF3A1Q15459 793 aaKnown RBP24.34■■□□□ 1.49
SSPN-204ENST00000535504 FAM117BQ6P1L5 589 aa24.34■■□□□ 1.49
SSPN-204ENST00000535504 SPRYD3Q8NCJ5 442 aa24.34■■□□□ 1.49
SSPN-204ENST00000535504 MCPH1Q8NEM0 835 aa24.34■■□□□ 1.49
SSPN-204ENST00000535504 AK8Q96MA6 479 aa24.34■■□□□ 1.49
SSPN-204ENST00000535504 NLRP4Q96MN2 994 aa24.34■■□□□ 1.49
SSPN-204ENST00000535504 NT5C3AQ9H0P0 336 aa24.34■■□□□ 1.49
SSPN-204ENST00000535504 NKX2-4Q9H2Z4 354 aa24.34■■□□□ 1.49
SSPN-204ENST00000535504 AGO3Q9H9G7 860 aaKnown RBP24.34■■□□□ 1.49
SSPN-204ENST00000535504 BMP2KQ9NSY1 1161 aaPredicted RBP24.34■■□□□ 1.49
SSPN-204ENST00000535504 LRFN2Q9ULH4 789 aa24.34■■□□□ 1.49
SSPN-204ENST00000535504 MTMR6Q9Y217 621 aa24.34■■□□□ 1.49
SSPN-204ENST00000535504 NOC2LQ9Y3T9 749 aaKnown RBP24.34■■□□□ 1.49
SSPN-204ENST00000535504 COL4A3BPQ9Y5P4 624 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms