RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 HOXD10P28358 340 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 ERCC5P28715 1186 aaPredicted RBP11.14□□□□□ -0.63
RPS3-219ENST00000534440 IRX5P78411 483 aaPredicted RBP11.14□□□□□ -0.63
RPS3-219ENST00000534440 TRIM32Q13049 653 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 PAK1Q13153 545 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 LRRC41Q15345 812 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 UVSSAQ2YD98 709 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 CCDC144BQ3MJ40 725 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 DUSP28Q4G0W2 176 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 COBLL1Q53SF7 1204 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 XKR9Q5GH70 373 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 CHRDL2Q6WN34 429 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 CCDC65Q8IXS2 484 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 ENOX1Q8TC92 643 aaKnown RBP11.14□□□□□ -0.63
RPS3-219ENST00000534440 AFG1LQ8WV93 481 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 NELFBQ8WX92 580 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 CEP89Q96ST8 783 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 ZHX3Q9H4I2 956 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 GPRC5CQ9NQ84 441 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 XPNPEP1Q9NQW7 623 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 DACH1Q9UI36 760 aa11.14□□□□□ -0.63
RPS3-219ENST00000534440 SFI1A8K8P3 1242 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 BECN2A8MW95 431 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 NOP56O00567 594 aaKnown RBP11.13□□□□□ -0.63
RPS3-219ENST00000534440 TBCAO75347 108 aaKnown RBP11.13□□□□□ -0.63
RPS3-219ENST00000534440 FAM13AO94988 1023 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 ZNF286BP0CG31 522 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 MYBP10242 640 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 XRCC5P13010 732 aaKnown RBP11.13□□□□□ -0.63
RPS3-219ENST00000534440 HOXD8P13378 290 aaPredicted RBP11.13□□□□□ -0.63
RPS3-219ENST00000534440 CCL5P13501 91 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 ZNF18P17022 549 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 STAT5BP51692 787 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 IRF5Q13568 498 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 LAMC2Q13753 1193 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 MTERF2Q49AM1 385 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 XKR3Q5GH77 459 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 HERC4Q5GLZ8 1057 aaPredicted RBP11.13□□□□□ -0.63
RPS3-219ENST00000534440 TTI2Q6NXR4 508 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 MAEAQ7L5Y9 396 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 PPTC7Q8NI37 304 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 RAET1EQ8TD07 263 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 CCDC47Q96A33 483 aaKnown RBP11.13□□□□□ -0.63
RPS3-219ENST00000534440 SEMA6BQ9H3T3 888 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 PDLIM7Q9NR12 457 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 CYP26B1Q9NR63 512 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 FANCLQ9NW38 375 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 KCND2Q9NZV8 630 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 RWDD2AQ9UIY3 292 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 ODF2LQ9ULJ1 636 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 GNEQ9Y223 722 aaKnown RBP11.13□□□□□ -0.63
RPS3-219ENST00000534440 NFE2L3Q9Y4A8 694 aa11.13□□□□□ -0.63
RPS3-219ENST00000534440 MYH11P35749 1972 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 ZBTB42B2RXF5 422 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 GOLGA6L19H0YKK7 550 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 DKC1O60832 514 aaKnown RBP eCLIP11.12□□□□□ -0.635e-21■■■□□ 15.5
RPS3-219ENST00000534440 LGALS2P05162 132 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 MMP3P08254 477 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 CYBAP13498 195 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 HOXD13P35453 343 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 TNFAIP2Q03169 654 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 PSMD2Q13200 908 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 PLCB4Q15147 1175 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 TARBP2Q15633 366 aaKnown RBP11.12□□□□□ -0.63
RPS3-219ENST00000534440 ZCWPW2Q504Y3 356 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 HSP90AA4PQ58FG1 418 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 CT47A1Q5JQC4 288 aaPredicted RBP11.12□□□□□ -0.63
RPS3-219ENST00000534440 CDKAL1Q5VV42 579 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 FAM160B1Q5W0V3 765 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 IQSEC1Q6DN90 963 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 EPM2AIP1Q7L775 607 aaPredicted RBP11.12□□□□□ -0.63
RPS3-219ENST00000534440 GUF1Q8N442 669 aaKnown RBP11.12□□□□□ -0.63
RPS3-219ENST00000534440 OR6J1Q8NGC5 347 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 U2AF1L4Q8WU68 220 aaKnown RBP11.12□□□□□ -0.63
RPS3-219ENST00000534440 SCFD1Q8WVM8 642 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 BSNDQ8WZ55 320 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 CEP170P1Q96L14 293 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 DUSP9Q99956 384 aaKnown RBP11.12□□□□□ -0.63
RPS3-219ENST00000534440 NIFKQ9BYG3 293 aaKnown RBP11.12□□□□□ -0.63
RPS3-219ENST00000534440 RNF208Q9H0X6 261 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 IKZF4Q9H2S9 585 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 OLFML3Q9NRN5 406 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 SAMSN1Q9NSI8 373 aaKnown RBP11.12□□□□□ -0.63
RPS3-219ENST00000534440 ZMYM2Q9UBW7 1377 aa11.12□□□□□ -0.63
RPS3-219ENST00000534440 SMTNL1A8MU46 457 aa11.11□□□□□ -0.63
RPS3-219ENST00000534440 PSMA7O14818 248 aa11.11□□□□□ -0.63
RPS3-219ENST00000534440 NKRFO15226 690 aaKnown RBP eCLIP11.11□□□□□ -0.63
RPS3-219ENST00000534440 PPP1R37O75864 691 aa11.11□□□□□ -0.63
RPS3-219ENST00000534440 SGPL1O95470 568 aa11.11□□□□□ -0.63
RPS3-219ENST00000534440 ELNP15502 786 aa11.11□□□□□ -0.63
RPS3-219ENST00000534440 GAP43P17677 238 aa11.11□□□□□ -0.63
RPS3-219ENST00000534440 CCNE1P24864 410 aa11.11□□□□□ -0.63
RPS3-219ENST00000534440 NMT1P30419 496 aaKnown RBP11.11□□□□□ -0.63
RPS3-219ENST00000534440 KCNA1Q09470 495 aa11.11□□□□□ -0.63
RPS3-219ENST00000534440 EMC2Q15006 297 aa11.11□□□□□ -0.63
RPS3-219ENST00000534440 SPATA1Q5VX52 437 aa11.11□□□□□ -0.63
RPS3-219ENST00000534440 SARM1Q6SZW1 724 aa11.11□□□□□ -0.63
RPS3-219ENST00000534440 OTUD6AQ7L8S5 288 aa11.11□□□□□ -0.63
RPS3-219ENST00000534440 PLPPR4Q7Z2D5 763 aa11.11□□□□□ -0.63
RPS3-219ENST00000534440 TLK2Q86UE8 772 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms