RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 DIRC2Q96SL1 478 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 PLCD4Q9BRC7 762 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 FUT8Q9BYC5 575 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 IPPKQ9H8X2 491 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 RXFP1Q9HBX9 757 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 PDRG1Q9NUG6 133 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 SIRT5Q9NXA8 310 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 TRMT1Q9NXH9 659 aaKnown RBP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 PALD1Q9ULE6 856 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 DDX19BQ9UMR2 479 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 FAN1Q9Y2M0 1017 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 YBX2Q9Y2T7 364 aaKnown RBP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 COQ6Q9Y2Z9 468 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.66□□□□□ -1.82
CSDE1-216ENST00000534389 RPS6KL1Q9Y6S9 549 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 PTPRGP23470 1445 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 BICRAQ9NZM4 1560 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 CCDC171Q6TFL3 1326 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 ADGRL2O95490 1459 aa3.66□□□□□ -1.82
CSDE1-216ENST00000534389 PBRM1Q86U86 1689 aa3.65□□□□□ -1.82
CSDE1-216ENST00000534389 WDR62O43379 1518 aa3.65□□□□□ -1.82
CSDE1-216ENST00000534389 SBNO2Q9Y2G9 1366 aa3.65□□□□□ -1.82
CSDE1-216ENST00000534389 ASXL2Q76L83 1435 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.65□□□□□ -1.83
CSDE1-216ENST00000534389 ZC3H12DA2A288 527 aaKnown RBP3.65□□□□□ -1.83
CSDE1-216ENST00000534389 EME2A4GXA9 379 aaPredicted RBP3.65□□□□□ -1.83
CSDE1-216ENST00000534389 LRRC10BA6NIK2 292 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 PDE8AO60658 829 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 DTNBO60941 627 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 RTN2O75298 545 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 CYBBP04839 570 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 GNAI3P08754 354 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 FAM163BP0C2L3 166 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 C6orf222P0C671 652 aaPredicted RBP3.65□□□□□ -1.83
CSDE1-216ENST00000534389 PYGMP11217 842 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 COL6A2P12110 1019 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 JUNBP17275 347 aaPredicted RBP3.65□□□□□ -1.83
CSDE1-216ENST00000534389 SDSP20132 328 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 SCNN1BP51168 640 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 TMF1P82094 1093 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 GRIK3Q13003 919 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 PTPN14Q15678 1187 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 TEX35Q5T0J7 233 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 LCE1DQ5T752 114 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 EGFLAMQ63HQ2 1017 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 STEAP3Q658P3 488 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 NAIF1Q69YI7 327 aaPredicted RBP3.65□□□□□ -1.83
CSDE1-216ENST00000534389 CC2D1AQ6P1N0 951 aaPredicted RBP3.65□□□□□ -1.83
CSDE1-216ENST00000534389 ZC3H14Q6PJT7 736 aaKnown RBP3.65□□□□□ -1.83
CSDE1-216ENST00000534389 FGD2Q7Z6J4 655 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 KIAA0907Q7Z7F0 614 aaPredicted RBP3.65□□□□□ -1.83
CSDE1-216ENST00000534389 RPAINQ86UA6 219 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 NLRX1Q86UT6 975 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 C11orf74Q86VG3 221 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 LRRTM3Q86VH5 581 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 LRRC8AQ8IWT6 810 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 IGSF22Q8N9C0 903 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 MNS1Q8NEH6 495 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 ANKRD20A12PQ8NF67 263 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 TBC1D22AQ8WUA7 517 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 SEC14L1Q92503 715 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 USP7Q93009 1102 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 IL17RAQ96F46 866 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 INTS4Q96HW7 963 aaKnown RBP3.65□□□□□ -1.83
CSDE1-216ENST00000534389 CLUHP3Q96NS8 147 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 CLIC6Q96NY7 704 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 EPB41L4BQ9H329 900 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 DEF6Q9H4E7 631 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 PLEKHA4Q9H4M7 779 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 PCIF1Q9H4Z3 704 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 NSUN3Q9H649 340 aaKnown RBP3.65□□□□□ -1.83
CSDE1-216ENST00000534389 DCP1AQ9NPI6 582 aaPredicted RBP3.65□□□□□ -1.83
CSDE1-216ENST00000534389 INTS7Q9NVH2 962 aaKnown RBP3.65□□□□□ -1.83
CSDE1-216ENST00000534389 SAMD15Q9P1V8 674 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 MCM8Q9UJA3 840 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 ADAM21Q9UKJ8 722 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 ACSL6Q9UKU0 697 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 DSEQ9UL01 958 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 NPFFR2Q9Y5X5 522 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 CFAP65Q6ZU64 1925 aaKnown RBP3.65□□□□□ -1.83
CSDE1-216ENST00000534389 ADGBQ8N7X0 1667 aa3.65□□□□□ -1.83
CSDE1-216ENST00000534389 POLR3AO14802 1390 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-216ENST00000534389 NUP155O75694 1391 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 TCRBV16S1A1N1A0A5B0 115 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 CCDC69A6NI79 296 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 TTC36A6NLP5 189 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 M0R2C6 588 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 KIF2AO00139 706 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-216ENST00000534389 MAP2K7O14733 419 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 HGSO14964 777 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-216ENST00000534389 ATP8B1O43520 1251 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 N4BP1O75113 896 aaKnown RBP3.64□□□□□ -1.83
CSDE1-216ENST00000534389 RFPL3O75679 317 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 ZBTB7AO95365 584 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 MSL3P1P0C860 447 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 ZSCAN22P10073 491 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-216ENST00000534389 SKILP12757 684 aa3.64□□□□□ -1.83
CSDE1-216ENST00000534389 PAX7P23759 505 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms